EBG00000313339 - n.2340A>T
Drug resistance types
168 Sensitive
48 RR-TB
50 HR-TB
61 MDR-TB
33 Pre-XDR-TB
0 XDR-TB
334 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 70 |
| lineage4.3.4.2 | 5 |
| lineage4.3.2 | 4 |
| lineage4.3.3 | 20 |
| lineage2.2.1 | 86 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.3.4.1 | 4 |
| lineage4.9 | 132 |
| lineage4.1.2 | 4 |
| lineage4.1.1 | 9 |
| lineage4.3.4 | 2 |
| lineage4.3.4.2.1 | 5 |
| La1.8.1 | 4 |
| La1.7.X-unk4 | 1 |
| lineage6 | 2 |
| lineage4;lineage3.1 | 1 |
| lineage3.1.1 | 9 |
| lineage3 | 55 |
| lineage4.1.2.1 | 38 |
| La1.3 | 12 |
| lineage4;La1.3 | 1 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 4 |
| 17 | |
| lineage4.4.1.1 | 16 |
| lineage2.2 | 3 |
| lineage4.5 | 4 |
| lineage4.4.2 | 5 |
| lineage4.7;lineage4.3.4.2 | 1 |
| lineage4.7 | 6 |
| lineage1.2.2.2 | 6 |
| lineage4.6.2.2 | 7 |
| lineage4.6 | 2 |
| lineage4.3 | 1 |
| lineage4.8 | 30 |
| lineage4.3.1.1 | 4 |
| lineage4.1.1.3 | 13 |
| lineage4.2.2.2 | 7 |
| lineage4.8.1 | 4 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 2 |
| lineage1.2.1.2.1 | 2 |
| lineage4.2.2.1 | 2 |
| lineage4.2.1 | 7 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage2.2.2 | 5 |
| lineage2.2.1.1 | 10 |
| lineage4.2.2 | 2 |
| lineage3.1.3 | 3 |
| lineage1.2.1.2 | 1 |
| lineage1.1.1 | 3 |
| lineage1.1.3.1 | 3 |
| lineage4.1 | 2 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.3.2.1 | 3 |
| lineage3.1.2.1 | 3 |
| lineage1.1.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3.1 | 2 |
| La1.8.2 | 1 |
| lineage1.1.2 | 8 |
| lineage4.6.1.2 | 3 |
| lineage4;lineage2 | 1 |
| lineage1 | 2 |
| lineage4;lineage3 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1.1.3.1 | 4 |
| lineage4.2.1.1 | 1 |
| La3 | 1 |
| lineage6.1.3 | 1 |
| lineage4.8.2 | 2 |
| lineage3.1.2 | 2 |
| lineage3.1.2.2 | 5 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage4.4 | 1 |
| lineage4.1.4 | 1 |
| lineage4.3.1 | 1 |
| lineage4.6.5 | 1 |
| lineage2.1 | 1 |
| lineage4.4.2;lineage2.2.1 | 1 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 694 |
Geographic prevalence
Country level data for this variant is available for 71 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR067712 | HR-TB | lineage4 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035316 | MDR-TB | lineage4.3.2 | br | ERR10796564 | Other | lineage4.3.3 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796581 | HR-TB | lineage4.1.2 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796619 | Other | lineage4.3.3 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796597 | Other | lineage4 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796629 | Other | lineage4 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796634 | Other | lineage4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR1213873 | MDR-TB | lineage4.3.4.2.1 | rw | ERR1213875 | Other | lineage4.3.3 | de | ERR1213930 | Other | lineage4.3.2 | pe | ERR349298 | Sensitive | lineage4 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR3806588 | Other | lineage6 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769404 | Other | La1.3 | None | ERR4769410 | Other | lineage4;La1.3 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769406 | Other | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769453 | Other | La1.3 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769495 | Other | La1.3 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769517 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769548 | Other | lineage4.9 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769551 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR4797313 | HR-TB | None | ERR4769555 | Other | La1.3 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4798431 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR4812155 | Sensitive | None | ERR6197021 | MDR-TB | lineage4.7;lineage4.3.4.2 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6197022 | Other | lineage4.9 | None | ERR6197032 | Other | lineage4.9 | None | ERR6197031 | Other | lineage4.7 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR6197033 | Other | lineage4.7 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR9117699 | Other | lineage4.1.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9117759 | Other | lineage3 | None | ERR9117788 | Other | lineage3 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117799 | Sensitive | lineage4.8 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10315472 | MDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11349189 | MDR-TB | lineage4.1.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180205 | Sensitive | lineage4.1.2.1 | None | SRR12006547 | Sensitive | lineage1.2.1.2.1 | None | SRR13180203 | Sensitive | lineage4.2.2.1 | None | SRR12199485 | Other | lineage2 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180204 | Sensitive | lineage3 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR16134505 | Sensitive | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1735585 | Sensitive | lineage3 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002926 | Other | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003044 | MDR-TB | lineage2.2.1 | None | SRR18003052 | Other | lineage2.2.1.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19303805 | Other | lineage4.8 | None | SRR19303784 | Other | lineage4.2.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR19303815 | Other | lineage4.8 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303899 | Other | lineage3 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR19303985 | Other | lineage4.8 | None | SRR19303917 | Other | lineage2.2.1 | None | SRR19304094 | Other | lineage6 | None | SRR19304035 | Other | lineage4.1.2.1 | None | SRR19304083 | Other | lineage4.4.1.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR19304109 | Other | lineage4.8 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR2100532 | Sensitive | lineage3 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2100537 | Sensitive | lineage3 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22048550 | Other | lineage1.1.3.1 | None | SRR21728727 | Sensitive | lineage1.2.2.2 | None | SRR22048474 | RR-TB | lineage4.8 | None | SRR22175229 | MDR-TB | lineage4.2.2.2 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR6207283 | Sensitive | lineage4.3.3 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4815278 | Other | lineage4.8 | None | ERR4815165 | Other | lineage4.1.2.1 | None | SRR3675477 | Other | lineage4.9 | None | ERR4814312 | Other | lineage4 | None | ERR4815310 | Other | None | SRR3675496 | Other | lineage4.1.1.3 | gb | ERR4814595 | Sensitive | lineage4.1.2.1 | gb | ERR4814639 | HR-TB | lineage4 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR3675209 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR4814671 | Other | lineage3 | gb | ERR4814690 | Sensitive | lineage2.2.1 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4814714 | Other | lineage3 | None | ERR1750926 | Other | lineage4.3.2.1 | za | SRR3675230 | RR-TB | lineage3 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR3675265 | Other | lineage4 | None | ERR4815502 | Other | lineage4.1 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | SRR3675288 | Other | lineage3 | None | SRR3675282 | Other | None | ERR4814905 | Other | lineage4.8 | gb | ERR4814976 | Other | lineage4.9 | None | ERR4814961 | Sensitive | lineage4.1.2.1 | gb | SRR3675292 | Sensitive | lineage4 | None | ERR4815550 | Other | lineage4 | None | SRR3675291 | Sensitive | lineage4.6 | gb | ERR4815022 | Other | lineage3.1.2.1 | None | SRR3675318 | Other | lineage4.9 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4815065 | Other | lineage4.1.2.1 | gb | SRR3675387 | Sensitive | None | SRR3675509 | Other | lineage4.9 | None | ERR4815949 | Sensitive | lineage2.2.1 | gb | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675513 | Other | lineage4.8 | None | SRR3675537 | Sensitive | lineage4.9 | None | ERR4816093 | Other | lineage1.1.3 | None | ERR2027220 | Other | lineage3.1.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816133 | Other | La1.8.2 | None | ERR4816186 | Sensitive | lineage3 | gb | ERR4816322 | Other | lineage4.9 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4817047 | Other | lineage4.2.2.1 | gb | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675565 | Other | lineage3 | None | ERR2446509 | Other | lineage3 | nl | ERR4817070 | Other | lineage1.1.2 | None | ERR4816417 | Other | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4817110 | Other | lineage4.1.1.3 | None | ERR4816470 | Other | lineage3 | None | ERR2124081 | MDR-TB | lineage4.6.1.2 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816569 | Other | lineage4.3.3 | gb | ERR2124083 | HR-TB | lineage4.6.1.2 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816711 | Sensitive | lineage4.1.1 | gb | SRR5818386 | Other | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4817434 | Other | lineage3 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR228180 | Sensitive | lineage3 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4818663 | Other | lineage3 | None | ERR4818988 | Other | lineage1 | None | ERR228175 | Sensitive | lineage3 | None | ERR4817998 | Other | lineage3 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4817948 | Other | lineage3 | gb | ERR2179696 | Sensitive | lineage4.4.2 | cn | ERR4818173 | Other | lineage2.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818126 | RR-TB | lineage1 | None | ERR2513450 | Other | lineage1.2.1.2.1 | gb | ERR4819041 | Sensitive | lineage4.3.3 | gb | ERR4818831 | Other | lineage3 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4818232 | Other | lineage4.1.2 | gb | ERR4818261 | Other | lineage1.1.2 | None | ERR2512660 | Sensitive | lineage3 | gb | ERR4818272 | Other | lineage4.3.2 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR2513259 | Other | lineage3 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR2513273 | Other | lineage4.1.2.1 | None | ERR4818538 | Other | lineage3 | gb | ERR4818561 | HR-TB | lineage4 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR2512770 | Other | lineage4.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818952 | Other | lineage3 | None | ERR2512850 | Sensitive | lineage4.9 | gb | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4817554 | Other | lineage1.1.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR5074710 | Sensitive | lineage4.3.3 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4819171 | Sensitive | lineage1.2.2.2 | gb | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819206 | Other | lineage4.8 | None | ERR4820290 | Other | lineage3 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341396 | Other | lineage4 | None | ERR2513910 | Other | lineage3 | gb | ERR4820729 | Other | lineage2.2.1 | None | ERR4819329 | Sensitive | lineage4.6.2.2 | None | ERR4820449 | Other | lineage4.1.2.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4819546 | HR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4819533 | Other | lineage1.1.2 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4820484 | Other | lineage4.8 | None | ERR4820492 | Other | lineage2.2.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4819872 | HR-TB | lineage4.4.1.1 | None | ERR4819910 | Other | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | ERR2514974 | HR-TB | lineage4.2.1.1 | gb | ERR4820043 | Sensitive | lineage4.1.2.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820846 | RR-TB | lineage4.6.2.2 | gb | ERR4820130 | Other | lineage3 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4820152 | Sensitive | lineage4.6.1.2 | gb | ERR4820161 | Other | lineage3 | None | ERR4821802 | Other | La3 | gb | ERR4821769 | Other | lineage4.1.2.1 | None | ERR2515230 | Sensitive | lineage4.8 | None | ERR4820193 | Other | lineage3 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR2517475 | Other | lineage4 | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6046087 | Other | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6045480 | Other | lineage4.1.1 | None | SRR6045485 | Other | lineage4.9 | None | SRR6045503 | HR-TB | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821136 | Other | lineage4.2.1 | gb | SRR6045516 | Other | lineage3.1.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4821958 | Other | lineage4.3.3 | gb | ERR4821214 | RR-TB | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821477 | Other | lineage4.8 | None | ERR4822043 | Other | lineage4.1.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR6045591 | Other | lineage4.1.2.1 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4821519 | Other | lineage3 | gb | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4821725 | Other | lineage4.8.2 | gb | SRR6045565 | Other | lineage4.6.2.2 | None | ERR4822133 | MDR-TB | lineage3 | None | ERR4821718 | Other | lineage4.2.2.2 | gb | SRR6046113 | Other | lineage4.1.1.3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR6045614 | Other | lineage4.8 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045705 | Other | lineage4.9 | None | SRR5818391 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818423 | MDR-TB | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR5818459 | Other | lineage4.9 | None | SRR6045749 | Other | lineage4.1.1 | gb | SRR5818464 | Other | lineage4.9 | None | SRR5818572 | Sensitive | lineage4.2.2.2 | None | SRR6045743 | Other | lineage3 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6046210 | Other | lineage4 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818684 | Other | lineage4.2.2.2 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR6044774 | Other | lineage3 | None | SRR6045876 | Other | lineage3 | gb | SRR6045896 | Sensitive | lineage4.4.1.1 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6044787 | Other | lineage4.4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044837 | Pre-XDR-TB | lineage2.2.1.1 | gb | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6044857 | Other | lineage4.8.1 | gb | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR6044957 | Other | lineage4.8.2 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6044993 | Other | lineage3 | None | SRR6045910 | Other | lineage3.1 | None | SRR6044896 | Other | lineage4.8 | gb | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044936 | Other | lineage4 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045986 | Other | lineage3 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045056 | Other | lineage2.2.1 | gb | SRR6046250 | Other | lineage4.9 | None | SRR6046173 | Other | lineage3 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6045178 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045295 | Other | lineage4.7 | None | SRR6045325 | Other | lineage4.8.1 | gb | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6045396 | Other | lineage4.3.1.1 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6046020 | Other | lineage3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046246 | Other | lineage3 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046442 | Other | lineage3 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR4828962 | Other | lineage4.1.4 | it | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046508 | Sensitive | lineage3.1.2.2 | gb | SRR6046482 | HR-TB | None | SRR6046497 | Other | lineage4.9 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046737 | Other | lineage4.9 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046729 | Other | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR6046779 | Other | lineage4.1.2.1 | gb | SRR6046766 | Other | lineage3.1.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046815 | Other | lineage3 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR4832061 | Sensitive | lineage2.2.1 | vn | SRR6046897 | Sensitive | lineage4 | None | SRR6046860 | Other | lineage4.4.1.1 | None | SRR6152838 | Other | lineage2.2.1.1 | ca | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4832002 | Pre-XDR-TB | lineage2.1 | None | ERR4831638 | Sensitive | None | ERR4831777 | MDR-TB | lineage2.2.1.1 | vn | ERR4831841 | HR-TB | lineage4.4.2;lineage2.2.1 | None | ERR4831839 | MDR-TB | lineage2.2.1 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR7131098 | MDR-TB | lineage4.3.3 | None | SRR6855695 | Sensitive | lineage4.8 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | ERR502943 | HR-TB | None | ERR3275190 | Other | lineage3 | nl | SRR6832644 | Other | lineage4.3.3 | None | ERR3014599 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR7131004 | Other | lineage4.6.2.2 | None | SRR7131047 | MDR-TB | lineage4.3.3 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR7131161 | Other | lineage4.8 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR7131234 | Other | lineage4.9 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR8600046 | Other | La1.8.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | DRR184903 | Sensitive | lineage2.2.2 | None | DRR188816 | Sensitive | lineage4.2.2 | None |
|---|
