Rv1630 - c.456G>C
Drug resistance types
34 Sensitive
37 RR-TB
14 HR-TB
27 MDR-TB
14 Pre-XDR-TB
1 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 27 |
| lineage4.9 | 48 |
| lineage5.1.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.1.1.3 | 4 |
| La1.3 | 1 |
| lineage3 | 3 |
| lineage2.2.2 | 5 |
| lineage2;lineage4.9 | 1 |
| lineage4.8 | 8 |
| La1.2 | 1 |
| La1.8.1 | 1 |
| lineage4.1.2 | 2 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage6.1.3 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.1.1.3.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.1.1.1 | 2 |
| lineage4.2.1 | 4 |
| lineage4.3 | 1 |
| lineage4.1.3 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.4 | 1 |
| lineage4 | 2 |
| lineage4.4.1.1 | 2 |
| lineage4.2.2.2 | 2 |
| La1.7.X-unk4 | 1 |
| lineage3.1.1 | 2 |
| lineage4.3.3 | 5 |
| lineage1.1.2 | 1 |
| lineage4.8.1 | 2 |
| lineage4.4.1.1.1 | 3 |
| lineage4.4.2 | 2 |
| lineage2.2;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.4.1.2 | 1 |
| 1 | |
| lineage2.2.1;lineage4 | 2 |
| La1.2.BCG | 1 |
| lineage2.2.1.1 | 1 |
| lineage2.2;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 161 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4769436 | Other | La1.3 | None | SRR1180250 | Other | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR4769418 | Other | La1.2 | None | SRR7236330 | Other | La1.8.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | SRR6044952 | Other | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR1184021 | Sensitive | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR4814976 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4829333 | Other | lineage4 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4816470 | HR-TB | lineage3 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR7821126 | Other | lineage1.1.3.2 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR4817069 | RR-TB | None | SRR28351408 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR5162090 | RR-TB | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4816322 | Other | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None |
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