EBG00000313339 - n.1893A>G
Drug resistance types
64 Sensitive
25 RR-TB
32 HR-TB
42 MDR-TB
22 Pre-XDR-TB
0 XDR-TB
97 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 23 |
| lineage4.4.2 | 1 |
| 7 | |
| lineage1.1.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.8 | 10 |
| lineage4.9 | 96 |
| lineage2.2 | 3 |
| lineage2.2.1 | 27 |
| lineage4.1.2.1 | 12 |
| lineage4.4.1.1 | 8 |
| lineage4.3.3 | 4 |
| lineage4.9.1 | 1 |
| lineage4.1.1.3 | 5 |
| lineage4.1 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.2.1 | 9 |
| lineage4.3.4.2 | 2 |
| lineage1.2.1.1 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.1.1 | 1 |
| lineage4.5 | 1 |
| lineage3 | 17 |
| lineage4;lineage2 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.7 | 3 |
| lineage4.2.1 | 2 |
| lineage1.1.3.3 | 1 |
| lineage4.8;lineage3 | 1 |
| lineage4.6.5 | 1 |
| lineage5.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.8.1 | 1 |
| La1.2 | 2 |
| La1.8.1 | 2 |
| La1.7.X-unk4 | 1 |
| lineage3.1.1 | 1 |
| La1.3 | 1 |
| lineage4.9;La1.3 | 2 |
| lineage4.3 | 1 |
| lineage6 | 1 |
| lineage2.2.2 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 1 |
| La2 | 1 |
| lineage3.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 282 |
Geographic prevalence
Country level data for this variant is available for 21 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20632814 | Sensitive | lineage4 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4815310 | Other | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR1465882 | Sensitive | lineage4.8 | None | ERR1465984 | Sensitive | lineage4.8 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4814639 | HR-TB | lineage4 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR1750896 | Sensitive | lineage2.2.1 | zw | ERR4815471 | Other | lineage4.9 | None | ERR1750889 | Other | lineage4.4.1.1 | None | ERR1750905 | Sensitive | lineage4.3.3 | za | ERR1750904 | Sensitive | lineage4.9.1 | za | ERR1750922 | Sensitive | lineage4.1.1.3 | za | ERR1750899 | Sensitive | lineage4.1.1.3 | zw | ERR1750919 | Sensitive | lineage4.4.1.1 | za | ERR1750931 | Sensitive | lineage4.1.2.1 | za | ERR4815550 | Other | lineage4 | None | ERR4814905 | Other | lineage4.8 | gb | ERR4815502 | Other | lineage4.1 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4815022 | Other | lineage3.1.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816238 | Sensitive | lineage4.1.1 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816322 | Other | lineage4.9 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4816470 | Other | lineage3 | None | ERR4817109 | Other | lineage3 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816417 | Other | lineage4.9 | None | ERR2229197 | Sensitive | lineage4 | None | ERR4816734 | Sensitive | lineage4.9 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR550986 | Sensitive | lineage4.8 | de | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4817434 | Other | lineage3 | None | SRR4034391 | MDR-TB | lineage4.1.2.1 | None | ERR4816852 | Other | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4818232 | Other | lineage4.1.2 | gb | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818831 | Other | lineage3 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818904 | Other | lineage4.8 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4820290 | Other | lineage3 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4819096 | Other | lineage4.4.1.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5266548 | MDR-TB | lineage2.2.1 | ru | SAMEA4041369 | Sensitive | lineage4.8 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4820503 | Other | lineage2.2.1 | None | ERR4821718 | Other | lineage4.2.2.2 | gb | ERR4821769 | Other | lineage4.1.2.1 | None | SRR6045485 | Other | lineage4.9 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4820030 | Other | lineage4.9 | None | ERR552643 | Sensitive | lineage4.7 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6046020 | Other | lineage3 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044817 | Other | lineage3 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046815 | Other | lineage3 | None | SRR6046219 | Other | lineage4.8;lineage3 | gb | SRR6046385 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR323037 | HR-TB | lineage4 | None | SRR6046852 | MDR-TB | lineage3 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR502477 | Sensitive | lineage5.1.1 | gh | ERR551526 | Sensitive | lineage4.8 | de | SRR7496471 | Sensitive | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | SRR7851312 | Other | La1.2 | None | ERR036207 | Other | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR3283021 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3439441 | Other | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR405191 | Other | lineage4.9 | None | ERR405190 | Sensitive | lineage4.9 | None | ERR405216 | Sensitive | lineage3.1.1 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR473279 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR6358951 | HR-TB | lineage4 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4800197 | HR-TB | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR9787336 | Other | lineage6 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140736 | RR-TB | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1175473 | Other | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173740 | Other | None | SRR1180250 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR16157123 | Other | lineage4.9 | None |
|---|
