EBG00000313339 - n.2442A>G


Drug resistance types
185 Sensitive 30 RR-TB 43 HR-TB 36 MDR-TB 23 Pre-XDR-TB 0 XDR-TB 129 Other
lineage Counts
lineage Count
lineage4.9 119
lineage3 22
lineage4 102
lineage4.9;lineage2.2 1
lineage2.2 1
lineage4.4.1.1.1 3
lineage2 2
lineage4.1.2.1 13
lineage2.2.1 35
lineage3.1.1 1
La2 1
32
lineage2.2.2 4
lineage4.2.1 3
lineage4.4.2 2
La1.4 1
La1.8.1 6
lineage2.2.1.1 4
lineage3.1.3 3
lineage1.2.1.2 1
lineage1.1.1 3
lineage4.5 3
lineage4.4.1.1 4
lineage4.2.2.2 2
lineage4.8 16
lineage4.1 2
lineage4.3.3 4
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage2.1 3
lineage1.2.1.1 1
lineage3.1 1
lineage1.1.2 5
lineage4;lineage2 1
lineage4.1.1.3 2
lineage4.3.4.2.1 5
lineage4.3.2.1 3
lineage4.1.1 1
lineage6.1.3 2
lineage3.1.2.2 1
lineage4.3.2 1
lineage5.2 2
lineage5.1.2 1
lineage4.7 1
lineage4.1.2 2
lineage4.6.1.1 1
lineage4.8.1 1
La1.3 9
lineage4.9;La1.3 3
lineage2.2.1.2 1
lineage1.1.1.1 1
lineage1.1.3.1 1
lineage4.6.2.2 2
lineage6 2
lineage4.3.4.2 1
lineage4.4.1.1;lineage4.1.2.1 1
spoligotype Counts
spoligotype Count
None 446
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1173770 Other lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1172717 Other lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR1173568 Other lineage4.9 None
SRR1173777 Other lineage4 None
SRR1175506 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1175473 Other lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175496 HR-TB lineage4.9 None
SRR1175500 MDR-TB lineage4 None
SRR1180300 Sensitive lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR1175508 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180406 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1180444 Sensitive lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181368 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1183054 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR13180205 Sensitive lineage4.1.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR12199485 Other lineage2 None
SRR12882280 Sensitive lineage3.1.1 None
SRR13180204 Sensitive lineage3 None
SRR13888750 Other La2 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR14801749 Sensitive None
SRR18002875 MDR-TB lineage2.2.2 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR16058169 Sensitive lineage4.4.2 None
SRR16278274 Other La1.4 None
SRR1791747 Other La1.8.1 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR16156775 Other lineage4.9 None
SRR16157123 Other lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
SRR18003031 HR-TB lineage2.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR20969475 Other lineage1.2.1.2 None
SRR20632814 Sensitive lineage4 None
SRR19295647 Sensitive lineage4.9 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR21677870 Sensitive None
SRR21240055 Other lineage4.1.2.1 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR21658550 Other lineage1.1.1 None
SRR22424787 Sensitive lineage4.9 None
SRR21713567 Sensitive lineage4.5 None
SRR21727728 Sensitive lineage4.4.1.1 None
SRR21727760 Other lineage2.2.1 None
SRR22175229 MDR-TB lineage4.2.2.2 None
SRR21677886 Sensitive lineage4.9 None
SRR22175263 Pre-XDR-TB lineage4.8 None
SRR12708416 Sensitive lineage4.1 None
ERR8025686 Pre-XDR-TB lineage2.2.2 None
SRR22424851 MDR-TB lineage4.3.3 None
SRR3675477 Other lineage4.9 None
SAMEA3501065 RR-TB lineage4.8 None
SRR3675472 Sensitive lineage4.9 None
ERR4815310 Other None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR4814639 HR-TB lineage4 None
SRR3675209 Sensitive lineage4.9 None
SRR3675229 Other lineage4 None
SRR3675210 Sensitive lineage4.9 None
ERR4815471 Other lineage4.9 None
ERR702405 Sensitive lineage2.1 None
ERR4814734 Other lineage1.2.1.1 None
SRR3675292 Sensitive lineage4 None
ERR1750916 Other lineage2.2.1.1 None
SRR3675246 Sensitive lineage4 None
ERR1750907 RR-TB None
SRR3675266 Sensitive lineage4.9 None
SRR3675283 Sensitive lineage4.9 None
ERR4815550 Other lineage4 None
ERR4814976 Other lineage4.9 None
SRR3675522 Other None
ERR4816964 Other lineage4.9 None
SRR3675318 Other lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR3675533 Sensitive lineage3 None
SRR3675527 RR-TB lineage4.9 None
SRR3675537 Sensitive lineage4.9 None
SRR3675542 Other lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR2027220 Other lineage3.1.3 None
SRR3675548 Sensitive lineage4.9 None
ERR2027257 Other lineage4.1.2.1 None
ERR4816470 Other lineage3 None
ERR2027290 RR-TB lineage3.1 None
ERR4816322 Other lineage4.9 None
ERR4816548 MDR-TB lineage4.5 None
SRR5341384 Sensitive lineage4.9 None
ERR216965 HR-TB lineage4.9 None
ERR4816868 Other lineage4.4.1.1 None
ERR4816571 Other lineage1.1.2 None
ERR4817434 Other lineage3 None
ERR4816852 Other lineage4.9 None
ERR4816762 Other lineage4;lineage2 None
ERR4816833 Other lineage4.1.1.3 None
ERR4818261 Other lineage1.1.2 None
ERR4817667 HR-TB lineage4.8 None
ERR228180 Sensitive lineage3 None
ERR3275190 Other lineage3 nl
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4815815 Sensitive lineage4 None
ERR228175 Sensitive lineage3 None
ERR2513121 Sensitive lineage3.1.3 None
SAMEA3501063 RR-TB lineage4.8 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818561 HR-TB lineage4 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR2513259 Other lineage3 None
ERR4818536 Other lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR4817554 Other lineage1.1.1 None
SRR5341453 Sensitive None
SRR5341366 Sensitive lineage4 None
ERR3276144 Other lineage3 nl
ERR4818624 Other lineage4.3.4.2.1 None
SAMEA3501067 RR-TB lineage4.8 None
SRR2100532 Sensitive lineage3 None
SRR5153091 HR-TB lineage4.3.3 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR5341375 Other lineage4.9 None
ERR4820723 RR-TB lineage4.4.1.1 None
SRR5341387 Other lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341396 Other lineage4 None
ERR4819314 Other lineage1.1.1 None
ERR4819357 Other lineage4.9 None
ERR4820290 Other lineage3 None
SRR5341300 Other lineage4 None
ERR4819546 HR-TB lineage3 None
ERR4820484 Other lineage4.8 None
SRR5341455 Sensitive lineage4 None
SRR5341296 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4 None
ERR4819383 RR-TB lineage4.9 None
SRR5341425 Other lineage4 None
ERR4819462 Other lineage4 None
ERR4819533 Other lineage1.1.2 None
SRR5341437 Sensitive lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR5341303 RR-TB lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341310 Other lineage1.1.2 None
SAMEA3501070 RR-TB lineage4.8 None
SRR5341308 Sensitive lineage4 None
ERR4819933 Other lineage4.9 None
ERR4820030 Other lineage4.9 None
SRR5341323 Sensitive lineage4 None
SRR5341319 Other lineage3 None
ERR4820130 Other lineage3 None
SRR5341345 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2515230 Sensitive lineage4.8 None
SRR5341461 Sensitive lineage4 None
ERR2446509 Other lineage3 nl
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341469 Other lineage4 None
SRR5341467 Other lineage4 None
SAMEA3501052 RR-TB lineage4.8 None
SRR6045480 Other lineage4.1.1 None
SRR6045496 Other lineage6.1.3 None
ERR4821143 RR-TB lineage4.9 None
ERR4821655 Sensitive lineage4 None
SRR6045503 HR-TB None
ERR4821172 RR-TB lineage4.9 None
SRR6046141 Other lineage4.9 None
SRR6045664 Other lineage4.2.1 None
SRR6045642 Other lineage3.1.2.2 None
SRR5818448 Other lineage4.9 None
SRR6045706 Sensitive lineage4 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6045892 Sensitive None
SRR6045832 HR-TB lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
SRR6045158 Other lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6046376 Other lineage3 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6046385 Other lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046611 HR-TB lineage4.9 None
SRR6046737 Other lineage4.9 None
SRR6046802 Other lineage4 None
SRR6046839 Other lineage4.9 None
SRR6511621 HR-TB None
ERR323037 HR-TB lineage4 None
ERR4832002 Pre-XDR-TB lineage2.1 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR4972567 MDR-TB lineage4.3.2 None
ERR4872077 Pre-XDR-TB lineage5.2 None
ERR502479 RR-TB lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831638 Sensitive None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR4831839 MDR-TB lineage2.2.1 None
ERR2503533 Other lineage4.1.2.1 fi
SRR6982196 Sensitive None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6789624 MDR-TB lineage4.1 None
SRR6832644 Other lineage4.3.3 None
SRR6982246 Sensitive lineage4 None
SRR6981961 Sensitive lineage2.2.1 None
SRR6855695 Sensitive lineage4.8 None
SRR6982471 Sensitive lineage2.2.1 None
SRR6981999 Sensitive lineage2.2.1 None
ERR5087855 Other La1.8.1 None
ERR502510 Sensitive lineage4 None
SRR7496471 Sensitive None
SRR7131076 Sensitive lineage5.1.2 None
SRR9971270 RR-TB lineage2.2.1 None
ERR502943 HR-TB None
SRR7496523 Other lineage4.7 None
SRR9970980 Other lineage4.1.2 None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR9970978 Sensitive lineage4.1.2 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR7535082 Sensitive lineage4 None
SRR9970979 Sensitive lineage4.8 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR8600288 Other La1.8.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR8651616 MDR-TB lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR9971168 Other lineage4.3.2.1 None
SRR9971113 Other lineage2.2.1 None
ERR323107 Other lineage4 None
SRR9971150 RR-TB lineage4.8.1 None
ERR1063896 Sensitive None
ERR323085 Sensitive lineage4 None
ERR1063855 Other lineage4 None
ERR323066 Sensitive lineage4 None
DRR184629 Other lineage2.2.1 None
DRR185024 Other lineage2.2.2 None
ERR067699 HR-TB lineage4 None
ERR067712 HR-TB lineage4 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1035122 Sensitive None
ERR1063883 Sensitive lineage4 None
ERR10762291 MDR-TB lineage2.2.1 None
ERR10796598 RR-TB lineage4.9 None
ERR10796597 Other lineage4 None
ERR3468488 RR-TB La1.8.1 None
ERR1213932 Sensitive lineage4.1.2.1 None
ERR133825 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR137286 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR3439441 Other La1.8.1 None
ERR349265 Sensitive lineage4 None
ERR349264 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR349298 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363426 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4 None
ERR369157 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR373945 HR-TB lineage4 None
ERR369158 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR373947 Sensitive lineage4 None
ERR373946 Sensitive lineage4 None
ERR3797081 Sensitive lineage4 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR400326 Sensitive lineage4 None
ERR400320 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4024991 Other None
ERR4596910 Sensitive lineage4 None
ERR473334 HR-TB lineage4.9 None
ERR4769404 Other La1.3 None
ERR4769408 Other La1.3 None
ERR4769419 Other lineage4.9 None
ERR400345 Other lineage4 None
ERR4178226 Sensitive lineage4 None
ERR4188247 HR-TB None
ERR473303 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR4769436 Other La1.3 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769442 HR-TB lineage4 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769472 Other lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4769548 Other lineage4.9 None
ERR4769495 Other La1.3 None
ERR4769506 Sensitive La1.3 None
ERR4769514 Other La1.3 None
ERR4769512 Sensitive lineage4.9 None
ERR4769516 Other La1.3 None
ERR4769518 Sensitive lineage4.9 None
ERR4769547 Sensitive lineage4.9;La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769552 Other La1.3 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4769555 Other La1.3 None
ERR4796254 Sensitive lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4796577 MDR-TB None
ERR4797474 Other None
ERR4797264 Sensitive None
ERR4797313 HR-TB None
ERR4797350 Sensitive lineage4.9 None
ERR4798099 Other None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4798431 HR-TB None
ERR4798823 HR-TB lineage4 None
ERR4799378 Sensitive lineage4 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR4811030 Sensitive None
ERR4811031 Sensitive lineage4.5 None
ERR6358979 Other None
ERR4812155 Sensitive None
ERR5908124 Other lineage4.8 None
ERR6358951 HR-TB lineage4 None
ERR6359069 Other lineage4.9 None
ERR6359070 Other lineage4.9 None
ERR6359066 HR-TB lineage4 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6359074 HR-TB lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR6866022 Other None
ERR736831 HR-TB lineage4.9 None
ERR6866410 Sensitive None
ERR6866547 Sensitive lineage4 None
ERR6866639 Other None
ERR736856 HR-TB lineage4 None
ERR736837 Other lineage4.9 None
ERR736834 Sensitive lineage4 None
ERR736848 HR-TB None
ERR751326 Sensitive lineage4 None
ERR736872 Sensitive lineage4 None
ERR970445 MDR-TB lineage2.2.1 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR970413 MDR-TB lineage2.2.1 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9119120 Other lineage4.8 None
ERR9124981 Sensitive lineage4.4.2 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR9786276 Sensitive lineage4.8 None
ERR9786076 Sensitive lineage3 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR9787336 Other lineage6 None
ERR9786705 Sensitive lineage4.1.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR9786597 Sensitive lineage4.6.2.2 None
ERR9787256 Other lineage6.1.3 None
SRR10315551 Sensitive lineage2.2.1 None
ERR9787362 Sensitive lineage6 None
ERR983241 MDR-TB lineage2.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR10315641 MDR-TB lineage4.4.1.1.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR10315567 Other lineage2.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR10808805 Sensitive None
SRR1062928 RR-TB lineage4 None
SRR10808399 Sensitive lineage4 None
SRR10808668 Sensitive lineage2.2.1 None
SRR10809074 Sensitive lineage4 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1140736 RR-TB None
SRR11462861 Other La1.8.1 None
SRR1158918 Sensitive lineage4 None