EBG00000313339 - n.2442A>G


Drug resistance types
161 Sensitive 27 RR-TB 48 HR-TB 27 MDR-TB 16 Pre-XDR-TB 0 XDR-TB 119 Other
lineage Counts
lineage Count
lineage4.9 206
lineage4.1.2.1 9
lineage4 4
lineage4.8 25
lineage1.1.1 3
lineage4.3.4.2.1 5
La1.7;lineage4.9;lineage6 1
lineage2.2.1 34
lineage4.3.3 6
lineage6.1.3 2
lineage3 14
lineage4.3.4.2 1
lineage4.1.1.3 3
lineage4.1.2 1
La1.8.1 8
lineage4.2.1 4
lineage2.2.1.1 3
lineage2.2.1;lineage4.9 3
lineage4.4.1.1 1
lineage2.2;lineage4.9 1
lineage4.8.1 1
lineage4.5 3
La1;lineage2;lineage4.9 1
lineage2.2.2 2
La1;lineage4.9 3
lineage1.2.1.2 1
La1.3 6
lineage1.1.3.1 1
lineage4.4.1.1.1 3
La1.4 1
La1.2.BCG 2
lineage4.3.2.1 3
lineage4.1.1.3;lineage4.9 2
lineage4.1.2.1;lineage4.4.1.1 1
2
lineage2;lineage4.9 1
lineage2.2.1;lineage4 3
lineage4.4.2 2
lineage4.2.2.2 2
La2 1
lineage4.3.2 1
lineage6 1
lineage1.1.2 2
lineage4.1.2.1;lineage4.9 1
lineage2;lineage4 1
lineage3.1.3 2
lineage4.8;lineage4.9 2
lineage4.1.2.1;lineage4.4.1 1
lineage2.1 1
lineage4.6.2.2 2
lineage4.2.1.1;lineage4.3.3 1
lineage2.2.1.2 1
lineage3.1.2.1;lineage4.9 1
lineage1.2.2.2 1
lineage4.6.1.1 1
lineage4.3.3;lineage4.9 1
La1;lineage4.1.2 1
lineage3;lineage4.9 1
lineage4.7 1
spoligotype Counts
spoligotype Count
None 398
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4796254 Sensitive lineage4.9 None
SRR6046141 Other lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR2503533 Other lineage4.1.2.1 fi
ERR4798823 HR-TB lineage4 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR978751 Other lineage4.8 None
ERR4819314 Other lineage1.1.1 None
SRR1173170 Other lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR137286 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR1180406 Sensitive lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR363453 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR4819357 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR1180345 Other lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
ERR9787336 RR-TB lineage6.1.3 None
ERR473323 HR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR13180204 Other lineage3 None
ERR9786592 Other lineage4.3.4.2 None
ERR978756 Other lineage4.8 None
SRR6045191 Sensitive lineage4.9 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR5153091 HR-TB lineage4.3.3 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341455 Sensitive lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR7617847 Other La1.8.1 None
ERR4817667 HR-TB lineage4.8 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR18909918 Other lineage2.2.1.1 None
ERR6866410 Sensitive lineage4.9 None
ERR702405 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2513259 Other lineage3 None
ERR867575 Other lineage4.9 None
ERR176741 Other lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR323107 Sensitive lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR21658550 Other lineage1.1.1 None
ERR2446509 Other lineage3 nl
SRR9971150 RR-TB lineage4.8.1 None
SRR16156775 Other lineage4.9 None
ERR867567 RR-TB lineage3 None
ERR736856 Sensitive lineage4.9 None
SAMEA3501065 RR-TB lineage4.8 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR349265 Other lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
ERR4769433 RR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR16156817 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR5341366 Sensitive lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
ERR4816548 HR-TB lineage4.5 None
ERR363474 Sensitive lineage4.9 None
SRR1175508 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR502473 RR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR10808805 Other La1;lineage4.9 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR6511621 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR3276144 Other lineage3 nl
SRR20969475 Other lineage1.2.1.2 None
SRR6046376 Other lineage3 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR5818448 Other lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR4769552 Sensitive La1.3 None
ERR4814976 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR978747 Other lineage4.8 None
SRR12416842 HR-TB lineage4.9 None
ERR3468488 Other La1.8.1 None
ERR3468488 Other La1.8.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR363502 Other lineage4.9 None
DRR185024 Other lineage2.2.2 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR21677886 Sensitive lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR9971113 Other lineage2.2.1 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR4819383 RR-TB lineage4.9 None
SRR9971080 RR-TB lineage2.2.1 None
ERR779852 Sensitive lineage4.9 None
ERR970413 MDR-TB lineage2.2.1 None
ERR736834 Sensitive lineage4.9 None
SRR16278274 Other La1.4 None
ERR867571 Other lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
ERR10796598 Other lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1915487 Other La1.2.BCG None
ERR349296 Sensitive lineage4.9 None
SRR2100532 Sensitive lineage3 None
ERR3797081 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR4769555 Sensitive La1.3 None
SAMEA3501052 RR-TB lineage4.8 None
SRR1181402 Sensitive lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR12708419 Other lineage4.3.3 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR1181368 Other lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4769550 Sensitive La1;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
SRR12420628 MDR-TB lineage2.2.1 None
SRR9971270 RR-TB lineage2.2.1 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR1181214 Other lineage4.9 None
ERR970445 MDR-TB lineage2.2.1 None
SRR1140736 Other lineage4.1.2.1 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR6855695 Sensitive lineage4.8 None
SRR7236177 Other La1.8.1 None
ERR926155 Sensitive lineage4.9 None
ERR4796577 HR-TB None
ERR4816322 Other lineage4.9 None
SRR21240055 Other lineage4.1.2.1 None
ERR926157 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1175496 Sensitive lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR1180300 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
ERR502474 RR-TB lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR6046839 Other lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR9124981 Sensitive lineage4.4.2 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR867538 Other lineage4.2.2.2 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR3275709 HR-TB lineage3 nl
SRR12708415 HR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
ERR9786705 Sensitive lineage4.1.2.1 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
SRR1184021 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR9787256 Other lineage6.1.3 None
ERR978762 Other lineage4.8 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
ERR502510 Sensitive lineage4.9 None
ERR363437 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR4816852 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR13888750 Other La2 None
ERR926158 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR4972567 MDR-TB lineage4.3.2 None
SRR10315567 HR-TB lineage2.2.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR10808399 Sensitive lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR867540 MDR-TB lineage2.2.1 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR4814639 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR926163 Other lineage4.9 None
DRR184629 Other lineage2.2.1 None
SRR1180319 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR4769436 Other La1.3 None
SRR1183054 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR13285191 Sensitive lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR3675541 Sensitive lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR13273266 Sensitive lineage4.3.3 None
ERR9787362 Sensitive lineage6 None
ERR4812155 Other lineage4.9 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
ERR867566 Other lineage4.9 None
SRR7236330 Other La1.8.1 None
ERR4769516 Sensitive lineage4.9 None
ERR4817554 Other lineage1.1.1 None
ERR4797193 HR-TB lineage1.1.2 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4815815 Sensitive lineage4.9 None
SRR16058169 Sensitive lineage4.4.2 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR4769514 Other La1.3 None
SAMEA3501070 RR-TB lineage4.8 None
SRR1183965 Sensitive lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR1181256 Other lineage4.9 None
ERR10762291 MDR-TB lineage2.2.1 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
SRR1180312 Sensitive lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR13285192 Sensitive lineage4.9 None
ERR867570 RR-TB lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR1175513 Sensitive lineage4.9 None
ERR4831618 MDR-TB lineage2.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR7535082 Sensitive lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR1163055 MDR-TB lineage4.8 None
ERR323062 Sensitive lineage4.9 None
ERR3275190 Other lineage3 nl
SAMEA3501063 RR-TB lineage4.8 None
SRR1181325 Sensitive lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR9786597 Other lineage4.6.2.2 None
ERR323066 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
ERR736872 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR12708414 HR-TB lineage2.2.1 None
SRR7069922 Other lineage2.2.1 None
SRR7236399 Other La1.8.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
SRR7069931 Other lineage4.2.2.2 None
ERR867568 Other lineage2.2.1;lineage4 None
ERR4818624 Other lineage4.3.4.2.1 None
ERR369163 Sensitive lineage4.9 None
ERR1063896 Sensitive None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR369151 Other lineage4.9 None
ERR363498 Sensitive lineage4.9 None
ERR502481 RR-TB lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR1172717 Sensitive lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR978752 Other lineage4.8 None
ERR926162 Sensitive lineage4.9 None
ERR4769408 Other La1.3 None
ERR867569 Other lineage4.9 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR5341300 HR-TB lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR216965 Sensitive lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR6359066 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR9786276 Sensitive lineage4.8 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR6981999 Sensitive lineage2.2.1 None
ERR363449 Sensitive lineage4.9 None
ERR4769495 Other La1.3 None
ERR4816470 HR-TB lineage3 None
ERR6359069 Sensitive lineage4.9 None
SRR7496471 Sensitive lineage4 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
ERR400326 Other lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR12708392 Other lineage2.2.1 None
ERR867572 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
ERR4829530 Pre-XDR-TB lineage4.8 None
ERR926159 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4.9 None
SRR5341303 Sensitive lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR363445 Other lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR6045158 Other lineage4.9 None
SRR9970979 Sensitive lineage4.8 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR1175512 Sensitive lineage4.9 None
ERR4769419 Sensitive lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
SRR1915485 Other La1.2.BCG None
SRR1180413 Sensitive lineage4.9 None
ERR323085 Sensitive lineage4.9 None
SRR10315551 Sensitive lineage2.2.1 None
SRR5341396 Other lineage3;lineage4.9 None
ERR867573 Other lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR473334 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR1180996 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
SRR20632814 Sensitive lineage4.9 None
ERR978757 RR-TB lineage4.8 None
SRR5341387 Other lineage4.9 None
SRR1173770 Other lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR228175 Sensitive lineage3 None
ERR363446 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
SRR21713567 Sensitive lineage4.5 None
SRR7496523 Other lineage4.7 None
ERR10796597 Other lineage4.3.3 None
ERR926165 Sensitive lineage4.9 None
SRR11462861 Other La1.8.1 None