EBG00000313339 - n.2442A>G


Drug resistance types
95 Sensitive 26 RR-TB 77 HR-TB 27 MDR-TB 14 Pre-XDR-TB 0 XDR-TB 144 Other
lineage Counts
lineage Count
lineage4.1.1.3;lineage4.9 2
lineage4.9 198
lineage3 14
lineage4.4.2 2
lineage2.2.1 29
lineage4.7 1
lineage4.8 24
lineage1.1.3.1 1
2
lineage4.6.2.2 2
lineage4.3.4.2 1
lineage4.1.1.3 3
lineage4.3.3 5
lineage1.1.1 3
lineage4.8.1 1
lineage4.3.4.2.1 5
La1.3 6
lineage4 4
lineage1.1.2 2
lineage4.1.2.1 9
lineage4.5 3
lineage2.2.2 2
lineage4.3.2.1 3
lineage1.2.2.2 1
lineage4.1.2.1;lineage4.9 1
La1;lineage4.9 3
lineage2;lineage4.9 1
lineage4.2.1 4
lineage4.6.1.1 1
La1.8.1 8
lineage2.2.1;lineage4.9 3
lineage2;lineage4 1
La1.2.BCG 2
lineage4.1.2.1;lineage4.4.1 1
lineage4.2.1.1;lineage4.3.3 1
lineage3.1.3 2
lineage4.8;lineage4.9 2
lineage2.2.1.1 3
lineage2.2.1;lineage4 3
lineage4.1.2 1
lineage2.2.1.2 1
La2 1
lineage3.1.2.1;lineage4.9 1
lineage4.3.2 1
lineage1.2.1.2 1
lineage6 1
lineage4.2.2.2 2
lineage4.3.3;lineage4.9 1
La1;lineage4.1.2 1
lineage3;lineage4.9 1
La1.7;lineage4.9;lineage6 1
lineage4.4.1.1.1 3
lineage6.1.3 2
lineage2.2;lineage4.9 1
La1;lineage2;lineage4.9 1
lineage4.4.1.1 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage2.1 1
La1.4 1
spoligotype Counts
spoligotype Count
None 383
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR926155 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR363479 Other lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR16058169 Sensitive lineage4.4.2 None
ERR970445 MDR-TB lineage2.2.1 None
SRR1180410 Sensitive lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR5341469 HR-TB lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
ERR971389 Other lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR1063896 HR-TB None
ERR369162 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
ERR363449 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR7069922 Other lineage2.2.1 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR4819357 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
ERR363499 Other lineage4.9 None
ERR369151 Other lineage4.9 None
SRR1181256 Other lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR502481 RR-TB lineage4.9 None
ERR9786528 Sensitive lineage4.6.2.2 None
SRR6046839 Other lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
SRR6982239 Sensitive lineage4.1.1.3 None
ERR4188247 HR-TB lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR926165 Other lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR6866410 HR-TB lineage4.9 None
SRR7535082 Other lineage4.9 None
ERR2513259 Other lineage3 None
ERR926162 Sensitive lineage4.9 None
ERR4819314 HR-TB lineage1.1.1 None
ERR176741 Other lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4799547 HR-TB lineage2.2.1 None
ERR323115 Sensitive lineage4.9 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR9971150 RR-TB lineage4.8.1 None
ERR867573 Other lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR4816762 Sensitive lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR349265 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
SRR1181351 Sensitive lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR4769514 Other La1.3 None
ERR4798823 HR-TB lineage4 None
ERR4821655 HR-TB lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR1140736 Other lineage4.1.2.1 None
SRR1181349 Sensitive lineage4 None
SRR11662694 Other lineage4.9 None
ERR4816548 HR-TB lineage4.5 None
SRR5341308 HR-TB lineage4.9 None
SRR1175508 Sensitive lineage4.9 None
ERR926160 Other lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR7496471 Sensitive lineage4 None
ERR502473 RR-TB lineage4.9 None
ERR4811030 Other lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR400326 Other lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR867572 Other lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR363498 Other lineage4.9 None
ERR926163 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR978751 Other lineage4.8 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR6046376 Other lineage3 None
SRR5818448 Other lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR3797081 Sensitive lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR3468488 Other La1.8.1 None
ERR3468488 Other La1.8.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR978752 Other lineage4.8 None
SRR21677886 Sensitive lineage4.9 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR21713567 Other lineage4.5 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
SRR5341425 Other lineage4.9 None
ERR867571 Other lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SAMEA3501070 RR-TB lineage4.8 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR9786705 Sensitive lineage4.1.2.1 None
SRR1915487 Other La1.2.BCG None
SRR2100532 Sensitive lineage3 None
ERR867569 Other lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR363446 Other lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR4796577 HR-TB None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR9786597 Other lineage4.6.2.2 None
ERR349300 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR12708418 HR-TB lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR867566 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR4769419 Sensitive lineage4.9 None
SRR21240055 Other lineage4.1.2.1 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR9786076 Other lineage3 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR13180204 Other lineage3 None
ERR978747 Other lineage4.8 None
SRR11462861 Other La1.8.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1791747 Other La1.8.1 None
SRR7617847 Other La1.8.1 None
SRR6045832 Other lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
SRR6046141 Other lineage4.9 None
ERR926156 Other lineage4.9 None
ERR4816322 Other lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR9124981 Sensitive lineage4.4.2 None
ERR978757 RR-TB lineage4.8 None
ERR926154 Sensitive lineage4.9 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR5341300 HR-TB lineage4.9 None
ERR369163 Other lineage4.9 None
ERR216965 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
ERR2503533 Other lineage4.1.2.1 fi
ERR4818624 Other lineage4.3.4.2.1 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR373946 Other lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR16156817 Other lineage4.9 None
SRR6981999 Sensitive lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
ERR323066 HR-TB lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR13888750 Other La2 None
ERR926158 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR1180996 Other lineage4.9 None
ERR4972567 MDR-TB lineage4.3.2 None
SRR6511621 HR-TB lineage4.9 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR485006 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR20969475 Other lineage1.2.1.2 None
SRR12420628 MDR-TB lineage2.2.1 None
ERR3275190 Other lineage3 nl
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR751326 Other lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SAMEA3501063 RR-TB lineage4.8 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR926159 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR9787362 Sensitive lineage6 None
ERR736831 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR867540 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR363445 Other lineage4.9 None
SRR7236330 Other La1.8.1 None
SRR1180444 Sensitive lineage4.9 None
ERR867538 Other lineage4.2.2.2 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR10796597 Other lineage4.3.3 None
SRR6045158 Other lineage4.9 None
ERR363453 Other lineage4.9 None
SRR16156775 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
SRR1915485 Other La1.2.BCG None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR502510 HR-TB lineage4.9 None
SRR12708419 Other lineage4.3.3 None
SRR5341396 Other lineage3;lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR349266 Other lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR369159 Other lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR6045359 HR-TB lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
SAMEA3501065 RR-TB lineage4.8 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR6358979 HR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR1181368 Other lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR373945 Other lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
SRR7069931 Other lineage4.2.2.2 None
ERR9786276 Sensitive lineage4.8 None
ERR867568 Other lineage2.2.1;lineage4 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR978756 Other lineage4.8 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR5341298 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR4769408 Other La1.3 None
ERR363421 Other lineage4.9 None
ERR9787336 RR-TB lineage6.1.3 None
ERR400320 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR1159378 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
DRR184629 Other lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
SRR18909918 Other lineage2.2.1.1 None
ERR4769433 RR-TB lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR10762291 MDR-TB lineage2.2.1 None
ERR867575 Other lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR228175 Sensitive lineage3 None
ERR2446509 Other lineage3 nl
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR4818536 Other lineage4.9 None
ERR978762 Other lineage4.8 None
ERR1063883 HR-TB lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR14801749 HR-TB lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR7236177 Other La1.8.1 None
ERR124636 HR-TB lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR4816470 HR-TB lineage3 None
SRR6855695 Sensitive lineage4.8 None
ERR1063846 HR-TB lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR9971270 RR-TB lineage2.2.1 None
ERR867570 RR-TB lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR4814639 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR3276144 Other lineage3 nl
ERR4769495 Other La1.3 None
ERR4814976 Other lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
ERR4769436 Other La1.3 None
SRR1180250 Other lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR1163055 MDR-TB lineage4.8 None
ERR4796254 Other lineage4.9 None
ERR323037 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR502474 RR-TB lineage4.9 None
SRR9613550 HR-TB lineage4.1.2.1 None
ERR4769552 Sensitive La1.3 None
SRR1172717 Sensitive lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR7236399 Other La1.8.1 None
ERR4831618 MDR-TB lineage2.1 None
SRR10809074 HR-TB lineage4.9 None
ERR867567 RR-TB lineage3 None
ERR4812155 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
ERR363502 Other lineage4.9 None
DRR185024 Other lineage2.2.2 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR4769516 Sensitive lineage4.9 None
ERR4817554 Other lineage1.1.1 None
SRR21658550 Other lineage1.1.1 None
ERR10796598 Other lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR1173777 Sensitive lineage4.9 None
ERR970413 MDR-TB lineage2.2.1 None
ERR4769555 Sensitive La1.3 None
SRR1180413 Sensitive lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR16278274 Other La1.4 None
SRR1173770 Other lineage4.9 None