Rv3596c - c.1764G>C


Drug resistance types
78 Sensitive 7 RR-TB 99 HR-TB 12 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 120 Other
lineage Counts
lineage Count
lineage4.9 183
lineage3 6
La1;lineage4.9 4
lineage2.2.1 15
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.8;lineage4.9 2
lineage1.1.1;lineage4 1
lineage4.1.1.3;lineage4.9 2
La1.2.BCG 2
lineage4.3.4.2.1 5
lineage4.5 3
M.canetti;lineage4.9 2
lineage4.2.1.1;lineage4.3.3 1
lineage4.1.1.2 1
lineage3.1.3 2
lineage4.4.1.1.1 1
lineage4.1.2.1 7
lineage6.1.3 2
lineage4 3
lineage2.2.1;lineage4 1
lineage4.3.4.2 1
lineage4.3.3 1
lineage4.8 5
La1.7;lineage4.9 9
lineage1.1.1 1
lineage4.2.1 2
La1.7;lineage4.9;lineage7 3
La1.8.1 4
lineage1;lineage4.9 2
La3;lineage4.9 8
lineage2.2.1.2;lineage7 1
lineage1.1.2 2
La1.7.1;lineage4.9 1
La1;lineage4.1.2 1
lineage4.1;lineage4.9 2
lineage4.4.1.2 1
lineage2.2.1;lineage4.9 1
La1.7;M.canetti;lineage4.9 2
lineage4.6.3;lineage4.9 1
lineage4.3.4 1
La1.7.1 1
lineage4.1.2 1
La3;M.canetti;lineage4.9 1
lineage2.2.1.1 1
lineage1.2.1.1 1
lineage2.2;lineage4.9 1
La1;lineage2;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage1.2.2.1;lineage4.4.1.1 2
lineage4.3.1;lineage4.9;lineage6 1
lineage4.6.2.2 1
La3;lineage2.1;lineage4.9;lineage6.3 1
La1.4 1
lineage3;lineage4.9 1
lineage5.1.4 1
La3;lineage4 1
lineage1.1.3.1 1
2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.7;lineage4.9;lineage6 1
La1.7;lineage3.1;lineage4 1
La1.7.1;La1.7.X-unk4 1
lineage4.3.2.1 1
La1.3 1
lineage4.4.1.1 1
spoligotype Counts
spoligotype Count
None 321
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4812155 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR133825 HR-TB La1;lineage4.9 None
ERR926164 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
ERR363453 Other lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR369156 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR373947 Other lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR1915487 Other La1.2.BCG None
SRR6045503 Other lineage4.9 None
ERR11465333 Sensitive lineage4.3.4.2.1 None
ERR502511 HR-TB lineage4.9 None
SRR13837446 Sensitive lineage4.9 None
ERR363446 Other lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
ERR752229 Other lineage4.5 None
ERR3797029 Other lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
SRR3675441 RR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR736872 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR13861522 Other lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4818252 HR-TB lineage4.1.1.2 None
ERR2513121 Sensitive lineage3.1.3 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR10808668 Other lineage2.2.1 None
ERR9787336 RR-TB lineage6.1.3 None
ERR702405 HR-TB lineage4.9 None
ERR4816964 HR-TB lineage4.9 None
ERR9786076 Other lineage3 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675265 Other lineage4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR9786592 Other lineage4.3.4.2 None
ERR4188247 HR-TB lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR6045832 Other lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
SRR3675492 Other La1.7;lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
ERR926156 Other lineage4.9 None
ERR4816322 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR4819314 HR-TB lineage1.1.1 None
ERR926154 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR323115 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR4818624 Other lineage4.3.4.2.1 None
SRR5341384 HR-TB lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR323066 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR3675580 Sensitive lineage4.9 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR6045706 Other lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
SRR6044875 Other lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4797184 HR-TB lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR1158918 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR502510 HR-TB lineage4.9 None
ERR363500 Other lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR736834 HR-TB lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR473334 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR971389 Other lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR13861551 Sensitive lineage4.9 None
ERR349300 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR3675385 Other La1.7;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
ERR4819357 Sensitive lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR4769493 Other lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR13837559 Sensitive lineage4.9 None
ERR926165 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
ERR4178309 Other lineage4.1.2.1 None
ERR4769433 RR-TB lineage4.9 None
ERR3283031 Other La3;lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
ERR926162 Sensitive lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR4818536 Other lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR373946 Other lineage4.9 None
ERR11466072 Sensitive lineage4.3.4.2.1 None
ERR400345 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR124636 HR-TB lineage4.9 None
ERR4816548 HR-TB lineage4.5 None
SRR6855695 Sensitive lineage4.8 None
ERR400336 Sensitive lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446566 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR1063858 HR-TB lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4596910 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
SRR3675387 Other lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR7236330 Other La1.8.1 None
ERR4797313 Sensitive lineage2.2.1 None
ERR473332 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR13861329 Other lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR16278274 Other La1.4 None
ERR212125 HR-TB lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR926155 Other lineage4.9 None
SRR13837447 Sensitive lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
ERR926161 Sensitive lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR181824 MDR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR1063896 HR-TB None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR12708416 Sensitive None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR6358979 HR-TB lineage4.9 None
ERR4797474 Other lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR4797264 HR-TB lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR11462861 Other La1.8.1 None
ERR6866639 HR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR7535082 Other lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR2513259 Other lineage3 None
SRR12142339 HR-TB lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341300 HR-TB lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR3275709 HR-TB lineage3 nl
ERR4816762 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR6046897 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR176778 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR1175508 Sensitive lineage4.9 None
ERR926160 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR13837558 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR4814639 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR4769495 Other La1.3 None
ERR4814976 Other lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
ERR4815471 HR-TB lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR323037 Other lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR4819462 Sensitive lineage4.9 None