EBG00000313339 - n.839C>G
Drug resistance types
102 Sensitive
12 RR-TB
9 HR-TB
16 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
132 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 168 |
| lineage4.3.2.1 | 2 |
| lineage4.3.3 | 5 |
| lineage4.4.1.1 | 4 |
| lineage5.1.2 | 1 |
| lineage2.2.1 | 17 |
| lineage2.2.2 | 1 |
| La1.2 | 2 |
| lineage3.1.2.1 | 2 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage3 | 11 |
| lineage4 | 4 |
| lineage4.1.2.1 | 7 |
| lineage4.2.2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8 | 5 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1.1 | 1 |
| La1.2;La1.8.1 | 1 |
| La3;lineage4.9 | 5 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.6 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.1.2 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage3.1.1 | 2 |
| lineage1.2.1.1 | 2 |
| lineage4.5 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.2.1 | 2 |
| lineage4.6.1.1 | 2 |
| lineage4.1.1.1 | 1 |
| La1.8.1 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| La1.4 | 1 |
| lineage4.3.1.1 | 2 |
| 1 | |
| lineage4.8.1 | 1 |
| lineage4.1;lineage4.9 | 2 |
| La1.6 | 1 |
| lineage4.3.4.1 | 1 |
| La1.3 | 1 |
| lineage1.1.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 280 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1181569 | Other | lineage4.9 | None | SRR1181580 | Other | lineage4.9 | None | SRR1209022 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR1180024 | Other | lineage4.9 | None | SRR1181592 | Other | lineage4.9 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR363447 | Other | lineage4.9 | None | SRR1180087 | Other | lineage4.9 | None | SRR1209038 | Sensitive | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | SRR1208476 | Other | lineage4.9 | None | SRR1208553 | Other | lineage4.9 | None | SRR3675527 | Other | lineage4.9 | None | SRR18002908 | Other | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR7069391 | Other | lineage4.9 | None | SRR1208756 | Other | lineage4.9 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR1208911 | Sensitive | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1208536 | Other | lineage4.9 | None | SRR1208925 | Other | lineage4.9 | None | ERR867544 | Other | lineage4.9 | None | SRR1208682 | Other | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR1181490 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5007165 | Other | lineage3 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1182927 | Other | lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | ERR369151 | Other | lineage4.9 | None | SRR1202713 | Sensitive | lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR1202656 | Sensitive | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR1183213 | Other | lineage4.9 | None | SRR1208562 | Other | lineage4.9 | None | SRR1182954 | Other | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR1208648 | Sensitive | lineage4.9 | None | SRR1208891 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR363449 | Sensitive | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR1183067 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR7070329 | Other | lineage3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4812155 | Other | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6046250 | Other | lineage4.9 | None | ERR4816699 | Other | lineage4.6 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR1181422 | Other | lineage4.9 | None | SRR1183339 | Other | lineage4.9 | None | SRR1183091 | Other | lineage4.9 | None | SRR1180047 | Other | lineage4.9 | None | SRR1180569 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR1208611 | Other | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR1180831 | Other | lineage4.9 | None | SRR1208827 | Sensitive | lineage4.9 | None | SRR1183373 | Other | lineage4.9 | None | ERR10796635 | Other | lineage4.8 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR1202404 | Other | lineage4.9 | None | SRR1208281 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1183402 | Other | lineage4.9 | None | SRR1180503 | Other | lineage4.9 | None | SRR1183438 | Other | lineage4.9 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | SRR1180482 | Other | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR1209015 | Sensitive | lineage4.9 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR1208588 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR1181269 | Other | lineage4.9 | None | SRR1181147 | Other | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR1180578 | Other | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR1202384 | Other | lineage4.9 | None | SRR1183531 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR1202706 | Other | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR1202406 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR1180686 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR1182900 | Sensitive | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR1183181 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR1182878 | Other | lineage4.9 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR7069030 | Other | lineage3 | None | SRR1182990 | Other | lineage4.9 | None | ERR9117788 | Other | lineage3 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR1183548 | Other | lineage4.9 | None | ERR4814976 | Other | lineage4.9 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR1208222 | Sensitive | lineage4.9 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR7236330 | Other | La1.8.1 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR1183686 | Sensitive | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR1202708 | Other | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR1183152 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR12708416 | Sensitive | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR1183520 | Other | lineage4.9 | None | SRR1183170 | Other | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR1181264 | Sensitive | lineage4.9 | None | SRR1183190 | Other | lineage4.9 | None | SRR1183281 | Other | lineage4.9 | None | SRR1208196 | Sensitive | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | ERR4798823 | HR-TB | lineage4 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1208526 | Sensitive | lineage4.9 | None | SRR1180020 | Other | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR369162 | Other | lineage4.9 | None | SRR6044936 | Other | lineage4.6 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR7070223 | HR-TB | lineage3 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR1202414 | Sensitive | lineage4.9 | None | SRR1181589 | Other | lineage4.9 | None | SRR1208721 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR1183684 | Other | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR1208277 | Other | lineage4.9 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR1208759 | Sensitive | lineage4.9 | None | SRR1182958 | Other | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR1202728 | Other | lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | SRR7851312 | Other | La1.2 | None | SRR1208892 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR1208332 | Other | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR1202714 | Sensitive | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | SRR5341345 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR1180113 | Other | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR1202702 | Other | lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | SRR1182880 | Other | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4798769 | Other | lineage1.1.3.3 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675318 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR6045371 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR1181299 | Other | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR363502 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4818831 | Other | lineage3 | None | SRR3675247 | Other | lineage4.9 | None |
|---|
