EBG00000313339 - n.839C>G


Drug resistance types
109 Sensitive 24 RR-TB 29 HR-TB 22 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 143 Other
lineage Counts
lineage Count
21
lineage4.9 66
lineage4 70
La1.8.1 2
lineage3.1.1 5
lineage4.1.2.1 17
lineage5.1.2 1
La1.2 2
La1.3 2
lineage4.9;La1.3 1
lineage2.2.1 20
lineage1.1.3.3 2
lineage4.5 1
lineage1.2.2.2 1
lineage4.6.2.2 5
lineage3 24
lineage4.8 9
lineage4.3.3 9
lineage4.3.1.1 4
lineage4.6.1.1 2
lineage4.4.1.1 9
lineage2.2.1.1 2
lineage4.1.2 2
La1.6 1
lineage4.2.1 5
La1.4 1
lineage4.4.1.2 1
lineage6 1
lineage4.1.1.3 5
lineage3.1.3 1
lineage1.2.1.2 1
lineage1.1.1 2
lineage4.1 1
lineage4;lineage2.2 1
lineage4.2.2.2 3
lineage4.3.4.2.1 2
lineage1.2.1.1 2
lineage3.1.2.1 1
lineage3.1 2
lineage4.6 1
lineage4;lineage2 1
lineage4.1.1.3.1 3
lineage4.8.2 1
lineage4.3.2.1 3
lineage1.2.1.2.1 1
lineage1.1.2 4
lineage3.1.2 2
lineage4.3.4.2 1
lineage6.1.3 1
lineage4.1.3 1
lineage4.1.3;lineage1.1.2 1
lineage1.1.3.1 1
lineage4.1.2.1;lineage2.2.1 1
lineage3.1.2.2 2
lineage1.1.1.1 2
lineage4.4.2;lineage2.2.1 1
lineage4.3.2 1
lineage4.1.1 1
spoligotype Counts
spoligotype Count
None 336
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3283014 HR-TB None
ERR3283028 Other None
ERR3283033 Sensitive lineage4.9 None
ERR3283031 HR-TB None
ERR349300 Sensitive lineage4.9 None
ERR3283057 HR-TB lineage4 None
ERR349264 Sensitive lineage4 None
ERR349298 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR3283047 HR-TB None
ERR349265 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349296 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR369151 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4 None
ERR369157 Sensitive lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR373946 Sensitive lineage4 None
ERR3797048 HR-TB None
ERR3797067 Other La1.8.1 None
ERR3797081 Sensitive lineage4 None
ERR3797087 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR400320 Sensitive lineage4 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR4178226 Sensitive lineage4 None
ERR4178309 Other lineage4.1.2.1 None
ERR400345 Other lineage4 None
ERR400538 RR-TB lineage5.1.2 None
ERR4596910 Sensitive lineage4 None
ERR4769472 Other lineage4.9 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR4769419 Other lineage4.9 None
ERR4769418 Other La1.2 None
ERR4769453 Other La1.3 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4797313 HR-TB None
ERR4769495 Other La1.3 None
ERR4811030 Sensitive None
ERR4797350 Sensitive lineage4.9 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4798431 HR-TB None
ERR4798769 Other lineage1.1.3.3 None
ERR4798823 HR-TB lineage4 None
ERR4811031 Sensitive lineage4.5 None
ERR9117732 Other lineage1.2.2.2 None
ERR6197024 RR-TB lineage4.9 None
ERR6197040 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR736837 Other lineage4.9 None
ERR4812155 Sensitive None
ERR6865513 Other lineage4.1.2.1 None
ERR8774355 MDR-TB lineage2.2.1 None
ERR9117678 Other lineage4.6.2.2 None
ERR9117729 Other lineage3 None
ERR9117806 Other lineage4.8 None
ERR9117763 HR-TB lineage3 None
ERR9117788 Other lineage3 None
ERR9121714 Sensitive lineage4.3.3 None
ERR9117812 Other lineage4.3.1.1 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR10315640 MDR-TB lineage4.8 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315558 Sensitive lineage2.2.1 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR10315579 Other lineage2.2.1.1 None
SRR10315693 RR-TB lineage4.1.2 None
SRR10993951 RR-TB La1.6 None
SRR1175507 MDR-TB lineage4 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR1173515 HR-TB lineage4.9 None
SRR1175496 HR-TB lineage4.9 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR11462861 Other La1.8.1 None
SRR1173385 Sensitive lineage4.9 None
SRR1175500 MDR-TB lineage4 None
SRR1175508 Other lineage4.9 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR1184308 Sensitive lineage4.9 None
SRR13837443 Sensitive lineage4.9 None
SRR16156188 HR-TB lineage4.9 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR18003031 HR-TB lineage2.2.1 None
SRR1735591 Other lineage4.1.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR16156775 Other lineage4.9 None
SRR16278274 Other La1.4 None
SRR18002908 Other lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR18213726 Other lineage3 None
SRR18213736 MDR-TB lineage3 None
SRR18913750 Other lineage2.2.1 None
SRR19303808 Sensitive lineage4.1.2.1 None
SRR19304057 Sensitive lineage4.4.1.2 None
SRR19304094 Other lineage6 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR18913742 Sensitive lineage3.1.3 None
SRR19303985 Other lineage4.8 None
SRR20969475 Other lineage1.2.1.2 None
SRR21240055 Other lineage4.1.2.1 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR21658550 Other lineage1.1.1 None
SRR22048392 Other lineage4.8 None
SRR22424787 Sensitive lineage4.9 None
SRR22424765 MDR-TB lineage4 None
SRR8692898 Other lineage4.9 None
SRR8692759 Other lineage4.9 None
SRR8692822 Other lineage4.9 None
SRR8692881 Other lineage4.9 None
SRR12708416 Sensitive lineage4.1 None
SRR8692790 RR-TB lineage4 None
SRR8692885 Other lineage4.9 None
SRR8692905 HR-TB None
SRR8692863 Other lineage4;lineage2.2 None
SRR3675477 Other lineage4.9 None
SRR8692776 Other lineage4.9 None
ERR4815143 HR-TB lineage4.2.2.2 None
SRR3675473 Sensitive lineage4.9 None
SRR3675472 Sensitive lineage4.9 None
ERR3275450 Other lineage4 None
ERR4815373 Sensitive lineage4.3.3 None
SRR3675209 Sensitive lineage4.9 None
ERR4814639 HR-TB lineage4 None
SRR3675210 Sensitive lineage4.9 None
SRR3675229 Other lineage4 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR3675234 Other None
ERR4812763 Other lineage2.2.1 None
SRR3675247 Other lineage4.9 None
ERR4814976 Other lineage4.9 None
SRR3675266 Sensitive lineage4.9 None
SRR3675261 Other lineage1.2.1.1 None
SRR3675279 Other None
SRR3675283 Sensitive lineage4.9 None
ERR4813263 MDR-TB lineage4.8 None
SRR3675292 Sensitive lineage4 None
SRR3675318 Other lineage4.9 None
SRR3675387 Sensitive None
ERR4815022 Other lineage3.1.2.1 None
SRR3675542 Other lineage4.9 None
ERR4817464 Other lineage3.1.1 None
SRR3675522 Other None
SRR3675527 RR-TB lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR3675537 Sensitive lineage4.9 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR3675541 Sensitive lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
ERR4816231 Other lineage4 None
SRR3675553 Sensitive lineage4.9 None
ERR2027290 RR-TB lineage3.1 None
SRR3675552 RR-TB lineage4.9 None
ERR4816293 Other lineage4.1.2.1 None
SRR3675577 Sensitive lineage4.9 None
ERR4816322 Other lineage4.9 None
ERR4817131 Pre-XDR-TB None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816699 Other lineage4.6 None
ERR4816762 Other lineage4;lineage2 None
ERR4817434 Other lineage3 None
ERR4817294 Other lineage4.1.2 None
ERR4816852 Other lineage4.9 None
ERR4816868 Other lineage4.4.1.1 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4817452 Other lineage4.8 None
ERR4818265 Other lineage4.1.2.1 None
ERR4817667 HR-TB lineage4.8 None
ERR4817998 Other lineage3 None
ERR4815815 Sensitive lineage4 None
ERR3275190 Other lineage3 nl
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4818831 Other lineage3 None
ERR4818507 RR-TB lineage4.1.2.1 None
ERR4818904 Other lineage4.8 None
ERR3276170 Other lineage4.1.2.1 nl
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR4818561 HR-TB lineage4 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007165 MDR-TB lineage3 None
ERR4818536 Other lineage4.9 None
ERR2512770 Other lineage4.2.1 None
SRR5007169 RR-TB lineage4.8.2 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4820723 RR-TB lineage4.4.1.1 None
ERR2513830 RR-TB lineage4.8 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR4820290 Other lineage3 None
ERR4819372 Sensitive lineage1.2.1.2.1 None
SRR5341396 Other lineage4 None
ERR4819314 Other lineage1.1.1 None
ERR4819462 Other lineage4 None
ERR4819533 Other lineage1.1.2 None
ERR4819546 HR-TB lineage3 None
ERR4819636 Other lineage3.1.2 None
ERR4819706 MDR-TB lineage4.3.4.2 None
SRR5341437 Sensitive lineage4.9 None
SRR5341323 Sensitive lineage4 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR5341296 Sensitive lineage4.9 None
ERR2514692 Other None
ERR2446382 Other lineage4 None
ERR4819863 RR-TB lineage4.9 None
ERR4820019 Other lineage4.3.4.2.1 None
ERR4820130 Other lineage3 None
ERR4820043 Sensitive lineage4.1.2.1 None
ERR4820833 HR-TB None
SRR5341345 Sensitive lineage4.9 None
ERR4820193 Other lineage3 None
ERR2446509 Other lineage3 nl
ERR2517475 Other lineage4 None
ERR4821769 Other lineage4.1.2.1 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR4821172 RR-TB lineage4.9 None
SRR6045464 Other lineage4.1.1.3 None
SRR6045485 Other lineage4.9 None
SRR6045422 Other lineage4.3.1.1 None
SRR6045496 Other lineage6.1.3 None
SRR6045503 HR-TB None
ERR4821334 RR-TB lineage4.1.3 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4822101 Sensitive lineage4.1.3;lineage1.1.2 None
SRR6045565 Other lineage4.6.2.2 None
ERR4822138 Other lineage4.1.2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4821616 Other lineage1.1.3.1 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045706 Sensitive lineage4 None
SRR6045705 Other lineage4.9 None
SRR6045664 Other lineage4.2.1 None
SRR6045743 Other lineage3 None
SRR6045709 Other lineage4.1.2.1;lineage2.2.1 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6045778 Other lineage3.1 None
SRR6045843 Other lineage4.2.2.2 None
SRR6045805 Other lineage4.3.1.1 None
SRR6044819 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6044835 Sensitive lineage4 None
SRR6044958 Other lineage4.4.1.1 None
SRR6044904 Other lineage3 None
SRR6044936 Other lineage4 None
SRR6045944 Other lineage4.1.2.1 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR6044983 Other lineage3.1.1 None
SRR6044993 Other lineage3 None
SRR6045424 Other lineage1.1.2 None
SRR6045124 Other lineage4.9 None
SRR6045125 Other lineage1.1.2 None
SRR6046020 Other lineage3 None
SRR6045267 RR-TB lineage4 None
SRR6045312 Other lineage1.1.3.3 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6045359 Sensitive lineage4.9 None
SRR6046273 Other lineage3.1.2 None
SRR6046250 Other lineage4.9 None
SRR6046246 Other lineage3 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046291 Other lineage3 None
SRR6046463 Other lineage4.4.1.1 None
SRR6046442 Other lineage3 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046616 Other lineage4.3.1.1 None
SRR6046612 Other lineage1.1.1.1 None
SRR6046611 HR-TB lineage4.9 None
SRR6046701 Other lineage3.1.2.2 None
SRR6046703 Sensitive lineage4.9 None
SRR6046802 Other lineage4 None
SRR6046766 Other lineage3.1.1 None
ERR4832054 MDR-TB lineage2.2.1.1 None
SRR6046863 Sensitive lineage1.1.2 None
SRR6046897 Sensitive lineage4 None
SRR6046852 MDR-TB lineage3 None
ERR4831638 Sensitive None
ERR4831716 HR-TB lineage1.1.1.1 None
ERR4831841 HR-TB lineage4.4.2;lineage2.2.1 None
ERR4831839 MDR-TB lineage2.2.1 None
SRR6832644 Other lineage4.3.3 None
SRR6982246 Sensitive lineage4 None
SRR6982239 HR-TB lineage4.1.1.3 None
ERR4815783 Other lineage4.1.2.1 gb
SRR9971246 MDR-TB lineage4.1.1.3 None
ERR4831889 HR-TB lineage2.2.1 None
ERR502943 HR-TB None
SRR7131221 Other lineage4.6.2.2 None
SRR7131004 Other lineage4.6.2.2 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR7131251 Other lineage2.2.1 None
ERR10796563 Other lineage4.3.3 None
SRR7645936 Sensitive lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR9971168 Other lineage4.3.2.1 None
SRR7851312 Other La1.2 None
ERR067712 HR-TB lineage4 None
ERR10796561 Other lineage4.3.2 None
ERR10796558 Sensitive lineage4 None
ERR10796564 Other lineage4.3.3 None
ERR10796635 Other lineage4 None
ERR10796586 Other lineage4.9 None
ERR10796595 Other lineage4.9 None
ERR10796632 Other lineage4.3.3 None
ERR10796569 Other lineage4.9 None
ERR10796623 Other lineage4.1.1 None
ERR1199132 Sensitive lineage4.6.1.1 None