EBG00000313325 - n.434T>C
Drug resistance types
10 Sensitive
3 RR-TB
10 HR-TB
7 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 5 |
| lineage4.3.3 | 2 |
| lineage4.1.2.1 | 8 |
| lineage4.9 | 18 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1 | 3 |
| lineage2.2 | 2 |
| 5 | |
| La1.3 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.8 | 3 |
| lineage6 | 2 |
| lineage4.3.4.2 | 1 |
| lineage1.2.2.2 | 1 |
| La1.4 | 1 |
| lineage1.2.1.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.1.1 | 2 |
| lineage3 | 5 |
| lineage1.1.2 | 2 |
| lineage4.6.3 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 71 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1023525 | HR-TB | lineage4 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR4812495 | Other | lineage4.1.2.1 | pe | ERR323035 | Sensitive | lineage4.9 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3283025 | HR-TB | None | ERR1063857 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797081 | Sensitive | lineage4 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4769521 | HR-TB | None | ERR9119669 | HR-TB | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866807 | HR-TB | lineage4 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9787033 | Sensitive | lineage6 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR16156775 | Other | lineage4.9 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1175096 | Sensitive | lineage1.2.2.2 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4815310 | Other | None | ERR4814976 | Other | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | SRR3675565 | Other | lineage3 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | ERR4815956 | Other | lineage1.1.2 | None | ERR4818831 | Other | lineage3 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4816852 | Other | lineage4.9 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | ERR2513273 | Other | lineage4.1.2.1 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR2503404 | Sensitive | lineage4.1.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4820290 | Other | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4820193 | Other | lineage3 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR5818391 | Other | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None |
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