EBG00000313339 - n.840G>A
Drug resistance types
26 Sensitive
12 RR-TB
9 HR-TB
15 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
74 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 30 |
| lineage3.1.1 | 4 |
| lineage4.9;La1.3 | 1 |
| La1.3 | 2 |
| La1.2 | 1 |
| lineage4.6.2.2 | 5 |
| lineage2.2.1 | 10 |
| lineage3 | 18 |
| lineage1.2.2.2 | 2 |
| lineage4.8 | 5 |
| lineage4.3.1.1 | 4 |
| lineage4.4.1.1 | 8 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2.1 | 6 |
| lineage4.2.1 | 3 |
| lineage4.3.3 | 3 |
| lineage4.1.1.3 | 5 |
| 3 | |
| lineage4.4.1.2 | 1 |
| lineage4 | 4 |
| lineage1.2.1.1 | 1 |
| lineage4.6 | 1 |
| lineage3.1 | 2 |
| lineage4.1.2 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.1.3.3 | 1 |
| lineage1.1.2 | 3 |
| lineage3.1.2 | 1 |
| lineage3.1.2.2 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 142 |
Geographic prevalence
Country level data for this variant is available for 16 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769419 | Other | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769453 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769472 | Other | lineage4.9 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR9117788 | Other | lineage3 | None | ERR9117729 | Other | lineage3 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117763 | HR-TB | lineage3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR9117806 | Other | lineage4.8 | None | ERR9117812 | Other | lineage4.3.1.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR10315640 | MDR-TB | lineage4.8 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1735591 | Other | lineage4.1.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR11972175 | MDR-TB | lineage2.2.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303808 | Sensitive | lineage4.1.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213726 | Other | lineage3 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR3675234 | Other | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | ERR4814656 | Other | None | SRR19303985 | Other | lineage4.8 | None | SRR22048392 | Other | lineage4.8 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR3105736 | Other | lineage1.2.2.2 | None | ERR4814930 | Other | lineage4.4.1.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4814976 | Other | lineage4.9 | None | SRR3675291 | Sensitive | lineage4.6 | gb | SRR3675552 | RR-TB | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR4817452 | Other | lineage4.8 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR4820290 | Other | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR2510387 | Pre-XDR-TB | lineage4.9 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4819372 | Sensitive | lineage1.2.1.2.1 | None | ERR4820133 | Sensitive | lineage1.1.3.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6045447 | Other | lineage3 | gb | ERR2693238 | HR-TB | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR4821946 | Sensitive | lineage2.2.1 | gb | SRR6045565 | Other | lineage4.6.2.2 | None | ERR4821291 | HR-TB | lineage4.2.1.1 | gb | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045705 | Other | lineage4.9 | None | SRR6044936 | Other | lineage4 | None | SRR6045709 | Other | lineage4.1.2.1;lineage2.2.1 | None | SRR6045743 | Other | lineage3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6044904 | Other | lineage3 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045778 | Other | lineage3.1 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6044945 | HR-TB | lineage4.1.2.1 | gb | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045056 | Other | lineage2.2.1 | gb | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6046020 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046064 | Other | lineage3 | gb | SRR6045424 | Other | lineage1.1.2 | None | SRR6046246 | Other | lineage3 | None | SRR6046273 | Other | lineage3.1.2 | None | ERR4829721 | Sensitive | lineage4.1.2.1 | it | SRR6046291 | Other | lineage3 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR6046729 | Other | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046679 | Other | lineage3 | gb | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046818 | Other | lineage4.2.1 | gb | ERR502484 | Sensitive | lineage4.9 | None | ERR502472 | Other | lineage4.6.2.2 | None | ERR502482 | Sensitive | lineage4.9 | None | SRR6046905 | Other | lineage3 | gb | ERR502483 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR4831836 | HR-TB | lineage2.2.1 | vn | ERR502492 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | ERR502497 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | ERR10796558 | Sensitive | lineage4 | None | SRR7131221 | Other | lineage4.6.2.2 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796620 | Other | lineage4.1.1 | None |
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