EBG00000313339 - n.840G>A


Drug resistance types
22 Sensitive 12 RR-TB 6 HR-TB 15 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 68 Other
lineage Counts
lineage Count
lineage4.1.2.1 4
lineage4.4.1.1 8
lineage3 14
lineage4.1.1.3.1 3
lineage4.9 30
lineage1.2.1.2.1 1
lineage4.3.4.2 1
lineage1.1.3.1 1
lineage4.3.4.2.1 1
lineage4.1.1.3 5
lineage4.3.1.1 4
lineage4.6.2.2 5
lineage4.2.1 2
lineage4.2.2.2 1
lineage4.1.2.1;lineage2.2.1 1
lineage3.1 2
lineage4 4
lineage3.1.1 4
lineage1.1.2 2
lineage3.1.2.2 2
lineage1.1.3.3 1
lineage3.1.2 1
lineage1.1.1.1 1
3
lineage4.3 1
lineage4.3.2 1
lineage4.3.3 3
lineage4.1.1 1
La1.3 2
La1.2 1
lineage4.9;La1.3 1
lineage2.2.1 7
lineage1.2.2.2 2
lineage4.8 5
lineage2.2.1.1 1
lineage4.4.1.2 1
lineage1.2.1.1 1
lineage4.1.2 1
spoligotype Counts
spoligotype Count
None 129
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3276170 Other lineage4.1.2.1 nl
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4820290 Other lineage3 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR2510387 Pre-XDR-TB lineage4.9 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007165 MDR-TB lineage3 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4819372 Sensitive lineage1.2.1.2.1 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4820133 Sensitive lineage1.1.3.1 None
ERR4820019 Other lineage4.3.4.2.1 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR2693238 HR-TB lineage4.9 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045422 Other lineage4.3.1.1 None
SRR6045464 Other lineage4.1.1.3 None
SRR6045565 Other lineage4.6.2.2 None
SRR6045705 Other lineage4.9 None
SRR6045664 Other lineage4.2.1 None
SRR6044958 Other lineage4.4.1.1 None
SRR6045743 Other lineage3 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6045805 Other lineage4.3.1.1 None
SRR6045709 Other lineage4.1.2.1;lineage2.2.1 None
SRR6045778 Other lineage3.1 None
SRR6044904 Other lineage3 None
SRR6045944 Other lineage4.1.2.1 None
SRR6044936 Other lineage4 None
SRR6044983 Other lineage3.1.1 None
SRR6045125 Other lineage1.1.2 None
SRR6046440 Other lineage3.1.2.2 None
SRR6045267 RR-TB lineage4 None
SRR6045312 Other lineage1.1.3.3 None
SRR6045424 Other lineage1.1.2 None
SRR6046273 Other lineage3.1.2 None
SRR6046020 Other lineage3 None
SRR6046246 Other lineage3 None
SRR6046291 Other lineage3 None
SRR6046463 Other lineage4.4.1.1 None
SRR6046616 Other lineage4.3.1.1 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046612 Other lineage1.1.1.1 None
SRR6046701 Other lineage3.1.2.2 None
SRR6046729 Other None
SRR6046852 MDR-TB lineage3 None
SRR6046766 Other lineage3.1.1 None
ERR502472 Other lineage4.6.2.2 None
ERR502482 Sensitive lineage4.9 None
ERR502485 Sensitive lineage4.9 None
ERR502484 Sensitive lineage4.9 None
ERR502483 Sensitive lineage4.9 None
ERR502486 Sensitive lineage4.9 None
ERR502497 Sensitive lineage4.9 None
ERR502489 Sensitive lineage4.9 None
ERR502490 Sensitive lineage4.9 None
ERR502492 Sensitive lineage4.9 None
ERR502498 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
SRR6982239 HR-TB lineage4.1.1.3 None
ERR10796582 HR-TB lineage4.3 None
SRR7131004 Other lineage4.6.2.2 None
SRR7131221 Other lineage4.6.2.2 None
ERR10796561 Other lineage4.3.2 None
ERR10796563 Other lineage4.3.3 None
ERR10796564 Other lineage4.3.3 None
SRR9971246 MDR-TB lineage4.1.1.3 None
ERR10796558 Sensitive lineage4 None
ERR10796586 Other lineage4.9 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR10796598 RR-TB lineage4.9 None
ERR10796620 Other lineage4.1.1 None
ERR10796595 Other lineage4.9 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR4769419 Other lineage4.9 None
ERR4769453 Other La1.3 None
ERR4769418 Other La1.2 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR9117729 Other lineage3 None
ERR4769472 Other lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6197024 RR-TB lineage4.9 None
ERR9117678 Other lineage4.6.2.2 None
ERR9117732 Other lineage1.2.2.2 None
ERR4769495 Other La1.3 None
ERR9117812 Other lineage4.3.1.1 None
ERR9117806 Other lineage4.8 None
ERR9117763 HR-TB lineage3 None
ERR9117788 Other lineage3 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315464 MDR-TB lineage4.4.1.1 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR10315579 Other lineage2.2.1.1 None
SRR10315640 MDR-TB lineage4.8 None
SRR1173385 Sensitive lineage4.9 None
SRR18002908 Other lineage2.2.1 None
SRR1184308 Sensitive lineage4.9 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR1173515 HR-TB lineage4.9 None
SRR11972175 MDR-TB lineage2.2.1 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR16156188 HR-TB lineage4.9 None
SRR1735591 Other lineage4.1.2.1 None
SRR19303808 Sensitive lineage4.1.2.1 None
SRR18213726 Other lineage3 None
SRR18213736 MDR-TB lineage3 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR19303985 Other lineage4.8 None
ERR4814656 Other None
SRR19304057 Sensitive lineage4.4.1.2 None
SRR22048392 Other lineage4.8 None
SRR22424765 MDR-TB lineage4 None
SRR3105736 Other lineage1.2.2.2 None
SRR3675234 Other None
SRR3675261 Other lineage1.2.1.1 None
SRR3675527 RR-TB lineage4.9 None
ERR4814930 Other lineage4.4.1.1 None
ERR4814976 Other lineage4.9 None
ERR4817294 Other lineage4.1.2 None
ERR2027290 RR-TB lineage3.1 None
SRR3675552 RR-TB lineage4.9 None
ERR4816322 Other lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR4817452 Other lineage4.8 None