EBG00000313325 - n.127T>C
Drug resistance types
8 Sensitive
24 RR-TB
19 HR-TB
10 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 2 |
| lineage4.1.2.1 | 2 |
| lineage4.8 | 13 |
| lineage3 | 4 |
| lineage4 | 9 |
| lineage1.1.1 | 2 |
| lineage4.9 | 27 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1 | 5 |
| lineage4.3.3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.7 | 1 |
| lineage2.2.2 | 1 |
| lineage4.9.1 | 1 |
| 6 | |
| La1.8.1 | 2 |
| lineage4.6.4 | 1 |
| lineage4.9;La1.3 | 1 |
| La1.3 | 1 |
| lineage6 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4;lineage2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 90 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818904 | Other | lineage4.8 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4818561 | HR-TB | lineage4 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR4820290 | Other | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR6045359 | Sensitive | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | DRR185024 | Other | lineage2.2.2 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR037504 | Other | lineage4.9.1 | None | ERR3283021 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR10680173 | MDR-TB | lineage1.1.1 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR387051 | HR-TB | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR3994100 | Other | lineage4 | None | ERR4407466 | HR-TB | lineage4.6.4 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769472 | Other | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4798823 | HR-TB | lineage4 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR9787033 | Sensitive | lineage6 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140736 | RR-TB | None | SRR11462861 | Other | La1.8.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173740 | Other | None | SRR16156804 | RR-TB | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | SRR22175229 | MDR-TB | lineage4.2.2.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4816729 | Sensitive | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR4815079 | RR-TB | lineage3 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR4814976 | Other | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816852 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR4817667 | HR-TB | lineage4.8 | None |
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