EBG00000313325 - n.93T>A
Drug resistance types
46 Sensitive
3 RR-TB
25 HR-TB
3 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 5 |
| lineage3 | 6 |
| La1.8.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.9 | 67 |
| lineage4 | 14 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage2 | 1 |
| La1.7.1 | 1 |
| lineage3.1.3 | 1 |
| 4 | |
| lineage4;lineage2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage1.1.1 | 1 |
| La3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.1 | 2 |
| lineage6.1.1 | 1 |
| lineage4.8.1 | 1 |
| La1.3 | 7 |
| lineage4.9;La1.3 | 2 |
| lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 124 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9786076 | Sensitive | lineage3 | None | SRR11462861 | Other | La1.8.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR3675488 | HR-TB | None | SRR2100532 | Sensitive | lineage3 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4814976 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | ERR4816800 | Other | lineage4.8 | gb | ERR216965 | HR-TB | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816852 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR228175 | Sensitive | lineage3 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4819462 | Other | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4820290 | Other | lineage3 | None | ERR4820185 | Sensitive | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819952 | Sensitive | La3 | None | SRR6045519 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | SRR6046141 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR6046385 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR998592 | Sensitive | lineage6.1.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769404 | Other | La1.3 | None | ERR4769419 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736837 | Other | lineage4.9 | None |
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