EBG00000313339 - n.2973A>G


Drug resistance types
188 Sensitive 17 RR-TB 39 HR-TB 42 MDR-TB 22 Pre-XDR-TB 1 XDR-TB 90 Other
lineage Counts
lineage Count
lineage2.2.1 57
lineage4.9 111
La1.7.1 2
lineage4.1.2.1 6
lineage4.2.1.1;lineage4.3.3 1
lineage4.1.2 9
La1.8.1 8
lineage2.2.2 12
lineage3.1.2.1 3
lineage4.1.1.3 10
lineage4.3.3 11
lineage3.1.1 4
lineage4.3.4.2.1 13
La1.8.X-unk6 1
lineage4.2.2.2 2
lineage4.8.1 3
lineage4.6.1.2 6
lineage4.4.1.1 13
lineage4.1.1.1 6
La1.3 5
lineage4.4.1.2 4
La1.4 1
lineage5.1.1 3
lineage3 14
lineage1.1.2;lineage4 1
lineage4.9;lineage5.1.1 1
lineage4.5 1
lineage1.2.1.1 1
lineage4.3.2 1
lineage2.2.1;lineage4 2
lineage4.4.1.1.1 3
lineage4.2.1 3
lineage4.3.2.1 12
lineage2;lineage4.9 1
lineage4.8 13
lineage4.6.5 1
lineage4.3.4.1 7
La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.2.1;lineage4.9 3
lineage4.3.4.2 2
lineage4 4
lineage3.1.2.1;lineage4.9 1
lineage1.2.2.2 2
La1.6 2
lineage1.2.1.2 1
lineage3.1.1;lineage4.9 1
lineage1.1.1 2
lineage2;lineage4 1
lineage4.1 1
lineage1.1.3.2 4
lineage1.2.1.2.1 1
La1.2 2
lineage4.7 2
lineage6.1.1 1
lineage1.1.3.1 1
lineage4.1.1.1;lineage4.9 1
La2 1
lineage4.1.2.1.1 1
lineage4.9.1 1
lineage4.3.3;lineage4.9 1
lineage4.6.2.2 1
lineage4.3.4.1;lineage4.9 1
2
La1;lineage4.9 1
lineage3.1.3 1
lineage4.1.1.3;lineage4.9 2
lineage1.2.2.1;lineage4 1
lineage4.1.3 1
spoligotype Counts
spoligotype Count
None 399
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1049674 HR-TB lineage2.2.1 None
ERR190388 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR6982471 Sensitive lineage2.2.1 None
ERR4769444 HR-TB lineage4.9 None
SRR7645853 MDR-TB lineage2.2.1 None
SRR1180406 Sensitive lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR1792232 Other La1.7.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR11342658 RR-TB lineage4.1.2 None
SRR11871419 Pre-XDR-TB lineage2.2.1 None
SRR1792378 Other La1.8.1 None
ERR736805 Sensitive lineage2.2.1 None
ERR6052110 Pre-XDR-TB lineage2.2.2 None
SRR1183680 Other lineage4.9 None
ERR4815022 Other lineage3.1.2.1 None
SRR6045191 Sensitive lineage4.9 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR5153091 HR-TB lineage4.3.3 None
SRR3675552 Other lineage4.9 None
ERR1063890 Sensitive lineage3.1.1 None
SRR6046117 Other lineage4.9 None
SRR6982558 Sensitive lineage4.3.4.2.1 None
SRR7240420 Other La1.8.X-unk6 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR108125 RR-TB lineage4.9 None
ERR216965 Sensitive lineage4.9 None
SRR6896339 MDR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR4769508 RR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR4816964 Sensitive lineage4.9 None
ERR4769433 RR-TB lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR6982414 Sensitive lineage4.9 None
SRR6982022 Sensitive lineage4.4.1.1 None
SRR22424787 Sensitive lineage4.9 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR6856032 Sensitive lineage2.2.1 None
ERR4814639 HR-TB lineage4.9 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR6982011 Sensitive lineage4.1.1.1 None
SRR1172885 HR-TB lineage4.9 None
ERR4769552 Sensitive La1.3 None
ERR6358951 Sensitive lineage4.9 None
ERR4769493 Other lineage4.9 None
SRR5152904 Other lineage2.2.1 None
SRR1175512 Sensitive lineage4.9 None
ERR4821679 Other lineage4.3.3 None
SRR6153231 Sensitive lineage4.4.1.2 None
SRR12199468 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR16278274 Other La1.4 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR867573 Other lineage4.9 None
ERR502480 Other lineage5.1.1 None
ERR2851356 Sensitive lineage4.9 None
SRR2100532 Sensitive lineage3 None
SRR1062859 Sensitive lineage2.2.1 None
ERR212033 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR6982178 Sensitive lineage2.2.1 None
SRR7240147 Other La1.8.1 None
ERR181708 RR-TB lineage1.1.2;lineage4 None
ERR2660536 Sensitive lineage2.2.1 None
ERR1082121 Sensitive lineage4.9;lineage5.1.1 None
ERR161047 Sensitive lineage4.4.1.1 None
SRR21737226 Sensitive lineage4.5 None
ERR4769439 HR-TB lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR1792247 Other La1.7.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4819357 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR6982115 Sensitive lineage4.3.2 None
ERR867568 Other lineage2.2.1;lineage4 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1180440 Other lineage4.9 None
SRR6982057 HR-TB lineage4.3.3 None
ERR161173 Sensitive lineage4.3.4.2.1 None
SRR1180237 Sensitive lineage4.1.2 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR473323 HR-TB lineage4.9 None
SAMN02585942 Sensitive lineage4.1.2 None
SRR2101529 Sensitive lineage4.3.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR17567930 Sensitive lineage4.4.1.1 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR1172717 Sensitive lineage4.9 None
SRR11342669 Other lineage4.8 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR5152926 MDR-TB lineage2.2.1 None
ERR161014 Sensitive lineage4.3.4.2.1 None
ERR4814745 Other lineage4.6.5 None
SRR7069800 Other lineage3.1.2.1 None
SRR2101689 Sensitive lineage4.3.4.1 None
ERR4817667 HR-TB lineage4.8 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR867526 MDR-TB lineage2.2.1 None
ERR216901 Other lineage3.1.1 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR3275709 HR-TB lineage3 nl
ERR4769408 Other La1.3 None
ERR176741 Other lineage4.9 None
ERR867569 Other lineage4.9 None
ERR176450 Sensitive lineage4.1.1.3 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR1465744 Sensitive lineage4.1.2.1 None
SRR12708371 HR-TB lineage4.1.1.3 None
SRR7645856 Sensitive lineage4.4.1.1 None
ERR987719 HR-TB lineage3 None
SRR2101312 MDR-TB lineage2.2.1 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR4033203 Sensitive lineage4.9 None
ERR176780 Sensitive lineage4.9 None
ERR2229198 Sensitive lineage4.8 None
SRR11342686 MDR-TB lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1180148 Sensitive lineage4.9 None
SRR6981962 Sensitive lineage4.3.2.1 None
SRR6855718 Sensitive lineage4.8 None
SRR6982465 Sensitive lineage4.3.4.2 None
SRR6982472 Sensitive lineage4.4.1.1 None
ERR161184 Sensitive lineage4.3.4.2.1 None
SRR2101681 Sensitive lineage4.8 None
ERR4816852 Other lineage4.9 None
SRR21714045 Other lineage2.2.1 None
ERR190339 Sensitive lineage4.3.4.2.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR10315567 HR-TB lineage2.2.1 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR7496471 Sensitive lineage4 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR16157123 Other lineage4.9 None
ERR4819933 Sensitive lineage4.9 None
ERR1873446 Pre-XDR-TB lineage4.1.1.3 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR1182885 Other lineage4.9 None
SRR18002945 Other lineage2.2.1 None
SRR12708392 Other lineage2.2.1 None
ERR867572 Other lineage4.9 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR133816 MDR-TB lineage2.2.1 None
ERR485006 HR-TB lineage4.9 None
SRR2101803 Sensitive lineage4.3.3 None
SRR10993957 Other La1.6 None
SRR6982427 Sensitive lineage4.1.1.1 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR6896255 Sensitive lineage4.3.3 None
SRR7240506 Other La1.8.1 None
SRR20969475 Other lineage1.2.1.2 None
SRR6982257 Sensitive lineage4.1.2.1 None
ERR171142 Other lineage3.1.1;lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR4816417 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR11342698 RR-TB lineage4.4.1.1 None
ERR2660499 Sensitive lineage4.1.1.3 None
SRR18003049 Other lineage2.2.1 None
DRR184913 Sensitive lineage2.2.1 None
SRR10869017 Pre-XDR-TB lineage4.3.3 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR7240350 Other La1.8.1 None
ERR473367 Sensitive lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
ERR867566 Other lineage4.9 None
ERR4818831 Other lineage3 None
SRR7236330 Other La1.8.1 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR4769516 Sensitive lineage4.9 None
SRR1181242 Sensitive lineage4.1.2 None
ERR5758436 Other lineage2.2.2 None
SRR11342634 MDR-TB lineage4.8 None
SRR21677886 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR6855851 Other lineage4.3.4.2.1 None
SRR10993953 Other La1.6 None
ERR751729 Other lineage1.1.1 None
SRR9971080 RR-TB lineage2.2.1 None
ERR1873549 Pre-XDR-TB lineage2.2.2 None
ERR502517 Other lineage5.1.1 None
ERR867571 Other lineage4.9 None
SRR6982332 Sensitive lineage4.4.1.1 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1181351 Sensitive lineage4.9 None
SRR10315551 Sensitive lineage2.2.1 None
ERR1873437 HR-TB lineage2.2.2 None
SRR6896340 Sensitive lineage4.4.1.1 None
SRR6982104 Sensitive lineage2.2.1 None
ERR473303 Sensitive lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
ERR3324345 RR-TB lineage4.1 None
ERR473334 HR-TB lineage4.9 None
ERR736831 Other lineage4.9 None
ERR161201 Sensitive lineage1.1.3.2 None
SRR11972274 RR-TB lineage1.2.1.2.1 None
SRR1238557 Other lineage4.9 None
SRR13199734 Other La1.2 None
ERR6359070 Sensitive lineage4.9 None
SRR21657198 HR-TB lineage4.3.3 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1181368 Other lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR1181136 Sensitive lineage2.2.1 None
SRR1180355 Sensitive lineage4.9 None
SRR6982168 Sensitive lineage4.4.1.1 None
SRR7496523 Other lineage4.7 None
SRR9971270 RR-TB lineage2.2.1 None
ERR1873561 XDR-TB lineage2.2.2 None
ERR216930 Sensitive lineage4.3.4.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR6045832 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1180250 Other lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR6896178 Sensitive lineage2.2.1 None
SRR6981912 Sensitive lineage4.3.2.1 None
SRR6982138 Sensitive lineage4.1.1.3 None
ERR4816762 Sensitive lineage4.9 None
ERR176580 Sensitive lineage4.3.4.2.1 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6982099 Sensitive lineage4.3.4.2.1 None
SRR1049675 HR-TB lineage2.2.1 None
ERR4820798 Other lineage3.1.2.1 gb
ERR216949 Sensitive lineage4.3.4.1 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR1082134 Sensitive lineage5.1.1 None
SRR6982037 Sensitive lineage4.1.1.1 None
SRR6981922 Sensitive lineage4.3.2.1 None
ERR6052085 Pre-XDR-TB lineage2.2.2 None
SRR10315556 Sensitive lineage2.2.1 None
SRR1180345 Other lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR163988 Sensitive lineage4.1.2 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
SRR1180300 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR1023250 Sensitive lineage6.1.1 None
SRR1180391 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1181085 Sensitive lineage4.1.2 None
SRR1181397 Sensitive lineage4.9 None
SRR6982328 Sensitive lineage3.1.1 None
ERR1873476 Pre-XDR-TB lineage2.2.2 None
ERR1034638 Pre-XDR-TB lineage2.2.1 None
ERR181940 Sensitive lineage3.1.1 None
SRR6981918 Sensitive lineage4.4.1.1 None
SRR6982342 Sensitive lineage4.3.2.1 None
ERR867538 Other lineage4.2.2.2 None
ERR2513259 Other lineage3 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR867575 Other lineage4.9 None
ERR1873463 MDR-TB lineage2.2.2 None
SRR12708415 HR-TB lineage2.2.1 None
ERR161125 Sensitive lineage4 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR6982070 Sensitive lineage2.2.1;lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
SRR1184021 Sensitive lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR176475 Sensitive lineage4.3.4.2.1 None
SRR2101693 Sensitive lineage4.1.2 None
SRR1011480 MDR-TB lineage4.8 None
ERR2446509 Other lineage3 nl
ERR6359066 HR-TB lineage4.9 None
ERR718268 Sensitive lineage1.1.1 None
SRR7236233 Other La1.8.1 None
SRR5153236 MDR-TB lineage2.2.1 None
ERR4818561 Sensitive lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR12199461 Sensitive lineage1.1.3.1 None
SRR1180420 Sensitive lineage4.9 None
SRR7236390 Other La1.8.1 None
SRR6982297 Sensitive lineage4.1.1.1;lineage4.9 None
ERR867554 Other lineage4.3.4.1 None
SRR1181283 Sensitive lineage4.9 None
SRR13888750 Other La2 None
ERR4816470 HR-TB lineage3 None
ERR181761 Sensitive lineage4.3.4.2.1 None
ERR323068 Sensitive lineage4.9 None
ERR6359069 Sensitive lineage4.9 None
SRR21675637 Sensitive lineage4.3.3 None
SAMN02350437 MDR-TB lineage4.8 None
ERR9786258 Sensitive lineage4.3.4.1 None
ERR6359074 HR-TB lineage4.9 None
ERR760877 MDR-TB lineage4.1.2.1.1 None
ERR867540 MDR-TB lineage2.2.1 None
SRR6982410 Sensitive lineage4.8.1 None
SRR1049581 MDR-TB lineage4.6.1.2 None
ERR161170 Sensitive lineage4.3.4.1 None
ERR176781 Sensitive lineage1.1.3.2 None
SRR6855915 Sensitive lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR1180319 Sensitive lineage4.9 None
ERR4769436 Other La1.3 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR1183054 Sensitive lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR323037 Other lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR6982337 Sensitive lineage4.7 None
ERR4596910 Sensitive lineage4.9 None
ERR4814976 Other lineage4.9 None
SRR2101663 Sensitive lineage1.1.3.2 None
ERR163970 Sensitive lineage4.6.1.2 None
ERR473283 Sensitive lineage2.2.1 None
ERR216928 Other lineage4.9.1 None
ERR1023509 Other lineage4.9 None
ERR137226 MDR-TB lineage2.2.1 None
ERR108424 Sensitive lineage4.8 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
SRR1180446 Other lineage4.9 None
ERR3275615 Sensitive lineage4.4.1.1 nl
SRR4033549 Other lineage2.2.2 None
SRR1181319 Sensitive lineage2.2.1 None
SRR4034393 MDR-TB lineage4.1.2.1 None
ERR3324325 MDR-TB lineage4.6.2.2 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR1011488 Sensitive lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR6982053 Sensitive lineage4.3.4.1;lineage4.9 None
ERR10796598 Other lineage4.9 None
SRR6982077 Sensitive lineage4.3.2.1 None
ERR4769514 Other La1.3 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR4769555 Sensitive La1.3 None
SRR1181402 Sensitive lineage4.9 None
SRR12708419 Other lineage4.3.3 None
SRR6982418 Sensitive lineage4.1.1.3 None
ERR144568 Sensitive None
SRR1182994 Sensitive lineage4.1.2 None
SRR9971046 MDR-TB lineage4.8 None
ERR323035 Sensitive lineage4.9 None
ERR4769418 Other La1.2 None
SAMN02350446 Sensitive lineage2.2.1 None
SRR1062851 MDR-TB lineage4.8 None
SRR6982058 HR-TB lineage2.2.1 None
SRR6982102 Sensitive lineage2.2.1 None
ERR1063882 Sensitive lineage4.3.4.2 None
ERR228175 Sensitive lineage3 None
ERR4819462 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
SRR1181256 Other lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR4769530 RR-TB lineage4.9 None
SRR17567887 Sensitive lineage4.4.1.2 None
SRR6855963 Sensitive lineage2.2.1 None
SRR6856087 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR867570 RR-TB lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR4815471 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR2660495 Sensitive lineage1.2.2.2 None
ERR2660498 Sensitive lineage4.3.4.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR4796577 HR-TB None
SRR21240055 Other lineage4.1.2.1 None
ERR216950 Sensitive lineage1.1.3.2 None
ERR736822 Sensitive lineage4.4.1.2 None
ERR4769442 Sensitive lineage4.9 None
SRR11342646 HR-TB lineage3 None
SRR18003024 RR-TB lineage2.2.1 None
SRR2101617 Sensitive lineage4.1.1.1 None
ERR212100 Sensitive lineage1.2.2.1;lineage4 None
SRR11342671 RR-TB lineage4.1.3 None
SRR1140724 Other lineage2.2.1 None
SRR11462861 Other La1.8.1 None
SRR1181214 Other lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR6982050 Sensitive lineage4.3.4.1 None
ERR1873461 Pre-XDR-TB lineage2.2.2 None
SRR6981993 Sensitive lineage4.3.2.1 None
SRR6982213 Sensitive lineage4.3.2.1 None
ERR3275190 Other lineage3 nl
ERR4816322 Other lineage4.9 None