EBG00000313325 - n.1029C>T
Drug resistance types
14 Sensitive
13 RR-TB
11 HR-TB
10 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
74 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 15 |
| lineage4.9 | 34 |
| La1.4 | 1 |
| lineage2.2.1.1 | 2 |
| lineage2.2.2 | 2 |
| lineage4.8 | 5 |
| lineage3.1.3 | 2 |
| lineage4.1.2.1 | 9 |
| lineage3 | 9 |
| lineage4 | 8 |
| lineage1.1.1 | 3 |
| lineage1.2.1.2 | 1 |
| lineage4.5 | 3 |
| 4 | |
| lineage4.1.2 | 1 |
| lineage4.1 | 1 |
| lineage3.1 | 1 |
| La1.2.BCG | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3.3 | 7 |
| lineage4.1.1.3 | 3 |
| lineage4.2.2.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.1 | 1 |
| La1.8.1 | 2 |
| lineage4.7 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.9;La1.3 | 1 |
| La1.2 | 1 |
| La1.3 | 1 |
| La1.6 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 132 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18213909 | Other | lineage4.1.2.1 | None | SRR18913779 | Other | lineage3 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21713567 | Sensitive | lineage4.5 | None | ERR1750908 | Sensitive | lineage4 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR1750907 | RR-TB | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4815714 | Sensitive | lineage4.1.2.1 | gb | ERR4815471 | Other | lineage4.9 | None | ERR1750944 | Other | lineage4.1.2 | za | ERR4815502 | Other | lineage4.1 | None | ERR1750943 | Sensitive | lineage4 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816090 | Other | La1.2.BCG | None | ERR4816964 | Other | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816369 | Pre-XDR-TB | lineage4.2.1 | gb | ERR4816417 | Other | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818831 | Other | lineage3 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR4818272 | Other | lineage4.3.2 | None | ERR4818536 | Other | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR4818583 | Other | lineage4.3.3 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4819546 | HR-TB | lineage3 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | ERR1023509 | Other | None | ERR2514576 | Other | lineage4.8 | gb | ERR4819910 | Other | lineage4.9 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821492 | HR-TB | lineage3 | None | ERR4820193 | Other | lineage3 | None | ERR4821718 | Other | lineage4.2.2.2 | gb | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6046250 | Other | lineage4.9 | None | ERR2851354 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR7131145 | Other | lineage4.1.2.1 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR5087623 | Other | La1.8.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR7496471 | Sensitive | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796597 | Other | lineage4 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10796635 | Other | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR9117826 | Other | lineage3.1.3 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR9117747 | HR-TB | lineage4.8 | None | SRR11462861 | Other | La1.8.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR15315984 | Sensitive | lineage4.5 | None |
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