EBG00000313325 - n.1029C>T


Drug resistance types
14 Sensitive 13 RR-TB 11 HR-TB 10 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 74 Other
lineage Counts
lineage Count
lineage2.2.1 15
lineage4.9 34
La1.4 1
lineage2.2.1.1 2
lineage2.2.2 2
lineage4.8 5
lineage3.1.3 2
lineage4.1.2.1 9
lineage3 9
lineage4 8
lineage1.1.1 3
lineage1.2.1.2 1
lineage4.5 3
4
lineage4.1.2 1
lineage4.1 1
lineage3.1 1
La1.2.BCG 1
lineage4.2.1 1
lineage1.1.2 1
lineage4.6.2.2 1
lineage4.3.2 1
lineage4.3.3 7
lineage4.1.1.3 3
lineage4.2.2.2 1
lineage1.1.3.1 1
lineage4.3.4.1 1
La1.8.1 2
lineage4.7 1
lineage4.3.4.2 1
lineage4.9;lineage4.1 1
lineage4.1.1 1
lineage4.4.1.1 2
lineage4.9;La1.3 1
La1.2 1
La1.3 1
La1.6 1
lineage4.3.2.1 1
spoligotype Counts
spoligotype Count
None 132
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR18002947 MDR-TB lineage2.2.1 None
SRR16156775 Other lineage4.9 None
SRR16278274 Other La1.4 None
SRR18002887 MDR-TB lineage2.2.1.1 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002963 Other lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR19303820 RR-TB lineage4.8 None
SRR18003031 HR-TB lineage2.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR18003049 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18213909 Other lineage4.1.2.1 None
SRR18913779 Other lineage3 None
SRR21727760 Other lineage2.2.1 None
SRR20632814 Sensitive lineage4 None
SRR21658550 Other lineage1.1.1 None
SRR20969475 Other lineage1.2.1.2 None
SRR21240055 Other lineage4.1.2.1 None
SRR21713567 Sensitive lineage4.5 None
ERR1750908 Sensitive lineage4 None
SRR22424778 RR-TB lineage2.2.1.1 None
ERR1750907 RR-TB None
SRR22424787 Sensitive lineage4.9 None
ERR4815714 Sensitive lineage4.1.2.1 gb
ERR4815471 Other lineage4.9 None
ERR1750944 Other lineage4.1.2 za
ERR4815502 Other lineage4.1 None
ERR1750943 Sensitive lineage4 None
SRR3675245 Other lineage4.1.2.1 None
ERR4814976 Other lineage4.9 None
ERR2027290 RR-TB lineage3.1 None
ERR4816090 Other La1.2.BCG None
ERR4816964 Other lineage4.9 None
ERR4816470 Other lineage3 None
ERR4816322 Other lineage4.9 None
ERR4816369 Pre-XDR-TB lineage4.2.1 gb
ERR4816417 Other lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR4817667 HR-TB lineage4.8 None
ERR4816571 Other lineage1.1.2 None
ERR4816852 Other lineage4.9 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4818710 Sensitive lineage4.9 None
ERR4818265 Other lineage4.1.2.1 None
ERR4818831 Other lineage3 None
ERR4818432 HR-TB lineage4.5 gb
ERR4818272 Other lineage4.3.2 None
ERR4818536 Other lineage4.9 None
ERR2513259 Other lineage3 None
ERR2503533 Other lineage4.1.2.1 fi
ERR4818583 Other lineage4.3.3 None
ERR4817554 Other lineage1.1.1 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4819175 Other lineage4.1.1.3 gb
ERR4819546 HR-TB lineage3 None
ERR4819314 Other lineage1.1.1 None
ERR4819357 Other lineage4.9 None
ERR4819462 Other lineage4 None
ERR4819933 Other lineage4.9 None
ERR1023509 Other None
ERR2514576 Other lineage4.8 gb
ERR4819910 Other lineage4.9 None
ERR4822138 Other lineage4.1.2.1 None
ERR4821769 Other lineage4.1.2.1 None
ERR4821962 Other lineage4.1.1.3 gb
ERR4821492 HR-TB lineage3 None
ERR4820193 Other lineage3 None
ERR4821718 Other lineage4.2.2.2 gb
ERR4821616 Other lineage1.1.3.1 None
SRR6045191 Sensitive lineage4.9 None
SRR6045124 Other lineage4.9 None
SRR6832644 Other lineage4.3.3 None
SRR6045359 Sensitive lineage4.9 None
SRR6982141 RR-TB lineage4.3.3 None
SRR6046250 Other lineage4.9 None
ERR2851354 RR-TB lineage4.9 None
ERR502470 RR-TB lineage4.9 None
SRR7131145 Other lineage4.1.2.1 None
ERR2984800 Pre-XDR-TB lineage4.3.4.1 None
ERR5087623 Other La1.8.1 None
SRR7131195 Other lineage2.2.1 None
SRR9971270 RR-TB lineage2.2.1 None
SRR7496523 Other lineage4.7 None
SRR7496471 Sensitive None
SRR9971122 MDR-TB lineage4.8 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR1023502 MDR-TB lineage2.2.1 None
DRR185024 Other lineage2.2.2 None
ERR10219876 Other lineage4.3.4.2 None
ERR10796564 Other lineage4.3.3 None
ERR10762291 MDR-TB lineage2.2.1 None
ERR10796560 MDR-TB lineage4.9;lineage4.1 None
ERR10796563 Other lineage4.3.3 None
ERR10796596 Other lineage4.9 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796620 Other lineage4.1.1 None
ERR10796597 Other lineage4 None
ERR4178161 Other lineage4.4.1.1 None
ERR10796632 Other lineage4.3.3 None
ERR10796635 Other lineage4 None
ERR4596910 Sensitive lineage4 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769419 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769418 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769472 Other lineage4.9 None
ERR4769495 Other La1.3 None
ERR6197024 RR-TB lineage4.9 None
ERR4796577 MDR-TB None
ERR4798823 HR-TB lineage4 None
ERR6197030 Other lineage4.9 None
ERR6197034 Other lineage4.9 None
ERR6197028 Other lineage4.9 None
SRR10315551 Sensitive lineage2.2.1 None
ERR6359070 Other lineage4.9 None
ERR6359069 Other lineage4.9 None
ERR9117826 Other lineage3.1.3 None
ERR6865446 Other lineage4.4.1.1 None
ERR9117747 HR-TB lineage4.8 None
SRR11462861 Other La1.8.1 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR10993951 RR-TB La1.6 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR1172987 HR-TB lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR15315984 Sensitive lineage4.5 None