EBG00000313339 - n.1264C>T
Drug resistance types
172 Sensitive
5 RR-TB
9 HR-TB
31 MDR-TB
9 Pre-XDR-TB
2 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 225 |
| lineage4.9 | 10 |
| La1.4 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.3 | 1 |
| lineage4.1.2.1 | 5 |
| lineage1.1.1 | 2 |
| lineage3 | 5 |
| lineage4.1.2.1;lineage4.3.3 | 1 |
| lineage2.2.1 | 3 |
| lineage4.4.1.1 | 1 |
| lineage1.2.1.2 | 1 |
| La1.2 | 2 |
| La1.8.1 | 1 |
| lineage4.3.3;lineage4.4.1.1 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 267 |
Geographic prevalence
Country level data for this variant is available for 20 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4829355 | Sensitive | lineage4.3.3 | None | SRR21239981 | Sensitive | lineage4.3.3 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6397602 | Sensitive | lineage4.3.3 | ca | ERR4972530 | Pre-XDR-TB | lineage4.3.3 | None | SRR9224946 | MDR-TB | lineage4.3.3 | None | ERR4812250 | Sensitive | lineage4.3.3 | None | SRR14164513 | Sensitive | lineage4.3.3 | None | SRR21240102 | Sensitive | lineage4.3.3 | None | SRR16278274 | Other | La1.4 | None | ERR12117945 | MDR-TB | lineage4.3.3 | None | SRR12830403 | Sensitive | lineage4.3.3 | None | SRR12830417 | Sensitive | lineage4.3.3 | None | SRR21240180 | Sensitive | lineage4.3.3 | None | SRR6397648 | Sensitive | lineage4.3.3 | ca | SRR21240240 | Sensitive | lineage4.3.3 | None | ERR4812140 | Sensitive | lineage4.3.3 | None | ERR4972528 | Pre-XDR-TB | lineage4.3.3 | None | SRR12830395 | Sensitive | lineage4.3.3 | None | SRR21239995 | Sensitive | lineage4.3.3 | None | SRR14164728 | Sensitive | lineage4.3.3 | None | SRR14165078 | Sensitive | lineage4.3.3 | None | SRR12830399 | Sensitive | lineage4.3.3 | None | ERR1213891 | MDR-TB | lineage4.3.3 | co | SRR21240198 | Sensitive | lineage4.3.3 | None | SRR14164981 | Sensitive | lineage4.3.3 | None | SRR19226962 | Other | lineage4.3.3 | None | ERR6865676 | Sensitive | lineage4.3.3 | None | SRR21240243 | Sensitive | lineage4.3.3 | None | SRR14164662 | Sensitive | lineage4.3.3 | None | SRR12830388 | Sensitive | lineage4.3.3 | None | SRR14164377 | Sensitive | lineage4.3.3 | None | SRR14164523 | Sensitive | lineage4.3.3 | None | SRR21239792 | Sensitive | lineage4.3.3 | None | SRR6398130 | Sensitive | lineage4.3.3 | ca | ERR4813046 | HR-TB | lineage4.3.3 | pe | SRR12830402 | Sensitive | lineage4.3.3 | None | ERR11068430 | Sensitive | lineage4.3.3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR21240081 | Sensitive | lineage4.3.3 | None | ERR4972493 | MDR-TB | lineage4.3.3 | None | SRR21240132 | Sensitive | lineage4.3.3 | None | SRR21239964 | Sensitive | lineage4.3.3 | None | SRR14164864 | RR-TB | lineage4.3.3 | None | SRR12830379 | Sensitive | lineage4.3.3 | None | SRR21240045 | Sensitive | lineage4.3.3 | None | SRR14164928 | Sensitive | lineage4.3.3 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR16509481 | MDR-TB | lineage4.3.3 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR6866374 | Sensitive | lineage4.3.3 | None | SRR21240082 | Sensitive | lineage4.3.3 | None | ERR2184383 | Sensitive | lineage4.3.3 | None | SRR21239987 | Sensitive | lineage4.3.3 | None | SRR6046250 | Other | lineage4.9 | None | SRR21239886 | Sensitive | lineage4.3.3 | None | SRR21239927 | Sensitive | lineage4.3.3 | None | ERR6879030 | MDR-TB | lineage4.3.3 | None | SRR21239858 | Other | lineage4.3.3 | None | SRR12830401 | Sensitive | lineage4.3.3 | None | SRR14164733 | Sensitive | lineage4.3.3 | None | SRR21240085 | Sensitive | lineage4.3.3 | None | SRR21240211 | Sensitive | lineage4.3.3 | None | SRR12830423 | Sensitive | lineage4.3.3 | None | SRR14164944 | Sensitive | lineage4.3.3 | None | ERR4812832 | RR-TB | lineage4.3.3 | None | ERR4813303 | HR-TB | lineage4.3.3 | None | SRR12830386 | Sensitive | lineage4.3.3 | None | ERR4972500 | Pre-XDR-TB | lineage4.3.3 | None | ERR6865425 | Other | lineage4.3.3 | None | SRR21240089 | Sensitive | lineage4.3.3 | None | ERR4769495 | Other | La1.3 | None | SRR21240168 | Sensitive | lineage4.3.3 | None | SRR12830376 | Sensitive | lineage4.3.3 | None | ERR4812731 | Sensitive | lineage4.3.3 | pe | SRR14164443 | Sensitive | lineage4.3.3 | None | SRR12830385 | Sensitive | lineage4.3.3 | None | ERR4812645 | Sensitive | lineage4.3.3 | pe | ERR4024942 | Sensitive | lineage4.3.3 | None | ERR4829928 | HR-TB | lineage4.3.3 | it | SRR21239969 | Sensitive | lineage4.3.3 | None | SRR12830389 | Sensitive | lineage4.3.3 | None | SRR13583387 | MDR-TB | lineage4.3.3 | None | SRR9224945 | MDR-TB | lineage4.3.3 | None | SRR12830387 | Sensitive | lineage4.3.3 | None | SRR6397532 | Sensitive | lineage4.3.3 | ca | SRR14164530 | Sensitive | lineage4.3.3 | None | ERR1034735 | MDR-TB | lineage4.3.3 | pe | SRR21239919 | Sensitive | lineage4.3.3 | None | SRR14164546 | Sensitive | lineage4.3.3 | None | SRR21240056 | Sensitive | lineage4.3.3 | None | SRR21240013 | RR-TB | lineage4.3.3 | None | SRR12830380 | Sensitive | lineage4.3.3 | None | SRR21240105 | Other | lineage4.3.3 | None | ERR4195362 | HR-TB | lineage4.3.3 | None | SRR21240004 | Sensitive | lineage4.3.3 | None | SRR14164818 | Sensitive | lineage4.3.3 | None | SRR14164510 | Sensitive | lineage4.3.3 | None | SRR14164400 | Sensitive | lineage4.3.3 | None | ERR6866897 | Sensitive | lineage4.3.3 | None | SRR28394005 | MDR-TB | lineage4.3.3 | None | SRR12830404 | Sensitive | lineage4.3.3 | None | SRR7070153 | Sensitive | lineage4.1.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR9029858 | MDR-TB | lineage4.3.3 | None | SRR21239942 | Sensitive | lineage4.3.3 | None | SRR14164830 | Sensitive | lineage4.3.3 | None | ERR6866696 | Sensitive | lineage4.3.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR12830364 | MDR-TB | lineage4.3.3 | None | SRR14164551 | Sensitive | lineage4.3.3 | None | SRR14164840 | Sensitive | lineage4.3.3 | None | ERR4812575 | Sensitive | lineage4.3.3 | pe | SRR21239806 | Sensitive | lineage4.3.3 | None | ERR4769493 | Other | lineage4.9 | None | SRR21240052 | Sensitive | lineage4.3.3 | None | SRR9224977 | MDR-TB | lineage4.3.3 | None | SRR14164826 | Sensitive | lineage4.3.3 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21240019 | Sensitive | lineage4.3.3 | None | SRR9225003 | MDR-TB | lineage4.3.3 | None | SRR7069391 | Other | lineage4.9 | None | SRR14164451 | Sensitive | lineage4.3.3 | None | SRR21240186 | Sensitive | lineage4.3.3 | None | SRR21239819 | Sensitive | lineage4.3.3 | None | ERR4812315 | Sensitive | lineage4.3.3 | None | SRR12830424 | Sensitive | lineage4.3.3 | None | ERR3287686 | MDR-TB | lineage4.3.3 | None | ERR4816322 | Other | lineage4.9 | None | SRR21240091 | Sensitive | lineage4.3.3 | None | SRR9224973 | MDR-TB | lineage4.3.3 | None | ERR4972572 | MDR-TB | lineage4.3.3 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | SRR14164539 | Sensitive | lineage4.3.3 | None | SRR21239930 | Sensitive | lineage4.3.3 | None | SRR21240152 | Other | lineage4.3.3 | None | SRR14164401 | Sensitive | lineage4.3.3 | None | ERR2446509 | Other | lineage3 | nl | SRR21240121 | Sensitive | lineage4.3.3 | None | SRR21239803 | Sensitive | lineage4.3.3 | None | SRR21239823 | Sensitive | lineage4.1.2.1;lineage4.3.3 | None | ERR6866183 | Sensitive | lineage4.3.3 | None | SRR12830361 | Sensitive | lineage4.3.3 | None | SRR12830406 | Sensitive | lineage4.3.3 | None | SRR21240099 | Sensitive | lineage4.3.3 | None | SRR12830415 | Sensitive | lineage4.3.3 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR21239873 | Sensitive | lineage4.3.3 | None | SRR6397973 | Sensitive | lineage4.3.3 | ca | ERR6866102 | Sensitive | lineage4.3.3 | None | ERR6866429 | Sensitive | lineage4.3.3 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR12830372 | Sensitive | lineage4.3.3 | None | SRR12830384 | Sensitive | lineage4.3.3 | None | SRR14164822 | Sensitive | lineage4.3.3 | None | SRR21240030 | Sensitive | lineage4.3.3 | None | SRR13583442 | MDR-TB | lineage4.3.3 | None | SRR10808638 | Sensitive | lineage4.3.3 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR20969475 | Other | lineage1.2.1.2 | None | SRR21240188 | Sensitive | lineage4.3.3 | None | ERR3275190 | Other | lineage3 | nl | SRR21239975 | Other | lineage4.3.3 | None | SRR9224932 | MDR-TB | lineage4.3.3 | None | ERR4814976 | Other | lineage4.9 | None | ERR2184323 | Other | lineage4.3.3 | pe | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR21240206 | Sensitive | lineage4.3.3 | None | ERR4820193 | Other | lineage3 | None | SRR21240115 | Sensitive | lineage4.3.3 | None | SRR14164752 | Sensitive | lineage4.3.3 | None | SRR14164531 | Sensitive | lineage4.3.3 | None | SRR21240136 | Sensitive | lineage4.3.3 | None | ERR4769418 | Other | La1.2 | None | ERR4818831 | Other | lineage3 | None | SRR7236330 | Other | La1.8.1 | None | SRR14164993 | Sensitive | lineage4.3.3 | None | SRR14164385 | Sensitive | lineage4.3.3 | None | SRR26112765 | Sensitive | lineage4.3.3 | None | SRR12830418 | Sensitive | lineage4.3.3 | None | SRR12830377 | Sensitive | lineage4.3.3 | None | SRR16156775 | Other | lineage4.9 | None | SRR12830383 | Sensitive | lineage4.3.3 | None | ERR4829447 | Sensitive | lineage4.3.3 | None | ERR4972485 | MDR-TB | lineage4.3.3 | None | SRR21239821 | Sensitive | lineage4.3.3 | None | SRR14164757 | Sensitive | lineage4.3.3 | None | ERR4972534 | XDR-TB | lineage4.3.3;lineage4.4.1.1 | None | SRR12830362 | Sensitive | lineage4.3.3 | None | SRR21240145 | Sensitive | lineage4.3.3 | None | ERR4972492 | MDR-TB | lineage4.3.3 | None | SRR21240173 | Sensitive | lineage4.3.3 | None | SRR7851312 | Other | La1.2 | None | ERR4025150 | Other | lineage4.3.3 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR21239920 | Other | lineage4.3.3 | None | SRR12830411 | Sensitive | lineage4.3.3 | None | SRR10808920 | Sensitive | lineage4.3.3 | None | SRR21239793 | Sensitive | lineage4.3.3 | None | SRR12830405 | Sensitive | lineage4.3.3 | None | SRR9224995 | MDR-TB | lineage4.3.3 | None | SRR28394168 | MDR-TB | lineage4.3.3 | None | SRR28409528 | Sensitive | lineage4.3.3 | None | SRR12830428 | Sensitive | lineage4.3.3 | None | SRR21239889 | Sensitive | lineage4.3.3 | None | SRR21240176 | Sensitive | lineage4.3.3 | None | SRR17657962 | MDR-TB | lineage4.3.3 | None | SRR21239797 | Sensitive | lineage4.3.3 | None | SRR10808704 | Other | lineage4.3.3 | None | SRR14164716 | Sensitive | lineage4.3.3 | None | SRR21240067 | Sensitive | lineage4.3.3 | None | SRR12830408 | Sensitive | lineage4.3.3 | None | SRR12830363 | Sensitive | lineage4.3.3 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR4972510 | Pre-XDR-TB | lineage4.3.3 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR21240076 | Sensitive | lineage4.3.3 | None | SRR21240216 | Sensitive | lineage4.3.3 | None | SRR9224987 | MDR-TB | lineage4.3.3 | None | SRR12830394 | Sensitive | lineage4.3.3 | None | SRR21240158 | Sensitive | lineage4.3.3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR1034799 | HR-TB | lineage4.3.3 | pe | SRR9224970 | MDR-TB | lineage4.3.3 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR21239982 | Sensitive | lineage4.3.3 | None | SRR21239822 | Sensitive | lineage4.3.3 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR12830397 | Sensitive | lineage4.3.3 | None | SRR14165032 | Sensitive | lineage4.3.3 | None | SRR21239943 | Sensitive | lineage4.3.3 | None | SRR12931676 | Sensitive | lineage4.3.3 | None | SRR12830398 | Sensitive | lineage4.3.3 | None | SRR13583388 | MDR-TB | lineage4.3.3 | None | SRR22048435 | HR-TB | lineage4.3.3 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR12931698 | Sensitive | lineage4.3.3 | None | SRR21240023 | Sensitive | lineage4.3.3 | None | SRR21239816 | Sensitive | lineage4.3.3 | None | SRR14164511 | Sensitive | lineage4.3.3 | None | SRR21239882 | Sensitive | lineage4.3.3 | None | SRR12830368 | Sensitive | lineage4.3.3 | None | SRR14165011 | Sensitive | lineage4.3.3 | None | SRR12830366 | Sensitive | lineage4.3.3 | None | SRR12830419 | Sensitive | lineage4.3.3 | None | ERR4972529 | MDR-TB | lineage4.3.3 | None | SRR12830425 | Sensitive | lineage4.3.3 | None | SRR14164934 | Sensitive | lineage4.3.3 | None | SRR21240162 | Sensitive | lineage4.3.3 | None | SRR12830420 | HR-TB | lineage4.3.3 | None | SRR12830426 | Sensitive | lineage4.3.3 | None | ERR3287778 | MDR-TB | lineage4.3.3 | pe | SRR15315965 | Sensitive | lineage2.2.1 | None | ERR2184587 | Sensitive | lineage4.3.3 | pe | SRR14165085 | Sensitive | lineage4.3.3 | None | ERR6865330 | Sensitive | lineage4.3.3 | None | ERR4972575 | XDR-TB | lineage4.3.3;lineage4.4.1.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287521 | MDR-TB | lineage4.3.3 | None | SRR21239895 | Sensitive | lineage4.3.3 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR21239780 | Sensitive | lineage4.3.3 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR21240187 | Sensitive | lineage4.3.3 | None | SRR21240073 | Sensitive | lineage4.3.3 | None | SRR21240101 | Sensitive | lineage4.3.3 | None | SRR16370202 | Other | lineage4.3.3 | None |
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