Rv1630 - c.786G>T
Drug resistance types
76 Sensitive
19 RR-TB
21 HR-TB
22 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
69 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 84 |
| lineage3.1.2.1 | 4 |
| lineage2.2.1 | 16 |
| lineage4.8 | 5 |
| lineage4 | 6 |
| lineage4.3.4.2.1 | 4 |
| lineage4.3.3 | 5 |
| lineage3;lineage4 | 2 |
| lineage4.1.1.3 | 3 |
| lineage3 | 15 |
| lineage3.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage2.2.1.1 | 2 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.3.4.2;lineage4.7 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.1.2.1 | 6 |
| lineage4.4.1.1.1 | 3 |
| lineage2.2;lineage4.9 | 1 |
| lineage1.1.3.1 | 2 |
| lineage2.2.1;lineage4 | 2 |
| lineage1.2.2 | 1 |
| lineage4.3.4.2 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage2.2.2 | 5 |
| lineage4.3.2.1 | 4 |
| lineage4.1.1.1 | 4 |
| lineage4.7 | 2 |
| lineage1.1.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage3;lineage4.9 | 2 |
| lineage4.1 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1.2 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.2.1 | 3 |
| lineage4.4.1.1 | 3 |
| lineage4.5 | 1 |
| lineage1.2.1.2 | 1 |
| La1.8.1 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage5 | 1 |
| lineage4.3.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| 1 | |
| lineage4.8.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 216 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046564 | Sensitive | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815909 | Other | lineage4.8 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR3675318 | Other | lineage4.9 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR4815471 | HR-TB | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR1180250 | Other | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR4818522 | Other | lineage3 | None | ERR4814748 | Other | lineage4.8 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4820324 | Other | lineage4 | None | ERR2446382 | Other | lineage4 | None | SRR5007165 | Other | lineage3 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR6197023 | MDR-TB | lineage4.3.4.2;lineage4.7 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR2512606 | HR-TB | lineage3 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR7070223 | HR-TB | lineage3 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | ERR4815910 | Other | lineage4.1.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4816964 | HR-TB | lineage4.9 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4820266 | Sensitive | lineage3 | None | ERR867575 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR4819772 | Other | lineage1.1.3.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR400345 | Other | lineage4.9 | None | ERR4818126 | Other | lineage1.2.2 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR4816470 | HR-TB | lineage3 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR4811030 | Other | lineage4.9 | None | ERR4816425 | Other | lineage2.2.2 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR400326 | Other | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4818259 | RR-TB | lineage4.1.1.1 | None | SRR3675522 | Other | lineage4.9 | None | ERR6197035 | Sensitive | lineage4.7 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR4816093 | Other | lineage1.1.3 | None | ERR10796598 | Other | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR2517475 | Other | lineage4 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4821222 | Other | lineage4.3.2.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR1180345 | Other | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | ERR4818556 | Sensitive | lineage3 | None | ERR2512986 | Other | lineage3 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR369151 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR9786076 | Other | lineage3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR3675552 | Other | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR2513259 | Other | lineage3 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR2512849 | Other | lineage1.1.3.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR4811031 | Other | lineage4.5 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR5311077 | Other | La1.8.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4816967 | Other | lineage5 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR4815901 | Other | lineage2.2.2 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675387 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR1062918 | Other | lineage3 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR12708416 | Sensitive | None | ERR4816852 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1181368 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR1181402 | Sensitive | lineage4.9 | None |
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