EBG00000313339 - n.1275C>T


Drug resistance types
113 Sensitive 32 RR-TB 43 HR-TB 43 MDR-TB 19 Pre-XDR-TB 0 XDR-TB 138 Other
lineage Counts
lineage Count
lineage4.1.2.1 12
lineage2.2.1;lineage4.9 4
lineage4.9 170
lineage3 13
lineage4 4
lineage4.8 14
lineage1.1.1 1
lineage2.2.1 46
lineage4.8.1 3
lineage4.6.1.2 4
lineage4.5 1
lineage1.2.1.1 1
lineage4.3.3 10
4
lineage2.2.1;lineage4 2
lineage4.2.1 7
lineage4.7 3
lineage1.1.2 1
lineage4.2.2.2 2
La1.3 3
lineage4.3 1
lineage4.1.1.3 6
lineage4.3.2.1 5
lineage2.2.2 5
lineage4.1;lineage4.9 2
lineage4.4.1.1 4
lineage4.1.1.1 2
lineage4.1.3 2
lineage1.2.2.2 2
lineage1.2.1.2 1
La1.8.1 4
lineage6 1
lineage4.4.1.2 1
lineage4.4.1.1.1 3
lineage4.1.2.1;lineage4.9 1
La1.2 1
lineage4.1.1.3;lineage4.9 2
lineage3.1.1 2
lineage4.1.2.1;lineage4.4.1 1
lineage4.3.4.2.1 9
lineage2.2;lineage4.9 1
lineage6.1.3 1
lineage1.1.3.3 1
lineage4.3.4.1;lineage4.9 1
lineage4.3.2 1
lineage3.1.1;lineage4.9 1
La1;lineage4.9 3
lineage1.1.3.1 1
lineage4.3.3;lineage4.9 1
lineage1.1.1.1 1
lineage4.9.1 2
lineage2.2.1.1 3
lineage4.3.4.2 1
lineage4.4.2 1
lineage4.2.1.1;lineage4.3.3 1
lineage2;lineage4.9 1
lineage4.1.2 1
lineage2.2;lineage4 1
lineage4.4 1
La1;lineage2;lineage4.9 1
lineage3;lineage4 1
La1;lineage4.1.2 1
lineage4.1.2.1;lineage4.4.1.1 1
spoligotype Counts
spoligotype Count
None 388
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1140736 Other lineage4.1.2.1 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR3275190 Other lineage3 nl
ERR4798823 HR-TB lineage4 None
ERR4818904 Other lineage4.8 None
ERR4819314 Other lineage1.1.1 None
SRR21277591 Sensitive lineage2.2.1 None
SRR1173170 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1158918 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR7131149 Pre-XDR-TB lineage4.8 None
ERR4769444 HR-TB lineage4.9 None
ERR323066 Sensitive lineage4.9 None
SRR7645906 Other lineage2.2.1 None
ERR369162 Other lineage4.9 None
SRR5007204 Other lineage4.1.2.1 None
ERR736872 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR12708414 HR-TB lineage2.2.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR369163 Sensitive lineage4.9 None
ERR1063896 Sensitive None
SRR18003042 Other lineage2.2.1 None
SRR1238559 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR363498 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR3675265 Other lineage4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR6824602 Sensitive lineage2.2.1 cn
SRR7645899 Other lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
ERR10796571 Other lineage4.9 None
ERR10796589 Other lineage4.9 None
ERR10796634 Other lineage4.7 None
SRR5341310 Other lineage1.1.2 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR363506 Sensitive lineage4.9 None
ERR4769408 Other La1.3 None
ERR867569 Other lineage4.9 None
ERR2027257 Other lineage4.1.2.1 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR3275941 RR-TB lineage4.3 nl
SRR5341300 HR-TB lineage4.9 None
ERR363479 Sensitive lineage4.9 None
ERR067712 Sensitive lineage4.9 None
SRR6045603 Other lineage4.1.1.3 None
SRR7131121 Other lineage4.3.3 None
SRR7131147 Other lineage4.1.2.1 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
SRR7645927 Other lineage4.8 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR1175487 Sensitive lineage4.9 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002937 Other lineage2.2.1 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR4769433 RR-TB lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR363426 Sensitive lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1180420 Sensitive lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR363449 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR10315567 HR-TB lineage2.2.1 None
SRR3675582 Other lineage4.9 None
ERR4816198 Sensitive lineage4.1.3 None
SRR3675209 Sensitive lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR400326 Other lineage4.9 None
SRR6046484 Other lineage1.2.2.2 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR12708392 Other lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
ERR3273109 HR-TB lineage4 None
ERR4820030 Other lineage4.9 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR20969475 Other lineage1.2.1.2 None
SRR1183054 Sensitive lineage4.9 None
SRR6045928 Other lineage4.9 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR12708372 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
ERR5311077 Other La1.8.1 None
ERR9787362 Sensitive lineage6 None
ERR363445 Other lineage4.9 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR6045158 Other lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR16156697 RR-TB lineage2.2.1 None
SRR1180399 Sensitive lineage4.9 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
ERR502470 RR-TB lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR7131195 Other lineage2.2.1 None
SRR5341299 HR-TB lineage4.9 None
ERR4819863 RR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4769555 Sensitive La1.3 None
SRR19303899 Other lineage3 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR4817069 RR-TB None
SRR7645971 Other lineage2.2.1 None
SRR20632814 Sensitive lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR9971046 MDR-TB lineage4.8 None
ERR4818536 Other lineage4.9 None
SRR11342646 HR-TB lineage3 None
ERR4769418 Other La1.2 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR10796629 Other lineage4.1;lineage4.9 None
SRR11342671 RR-TB lineage4.1.3 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
ERR10796597 Other lineage4.3.3 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1173310 Other lineage3.1.1 None
SRR6045909 Other lineage4.8.1 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR7236177 Other La1.8.1 None
SRR1181325 Sensitive lineage4.9 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR7645928 Other lineage4.7 None
ERR4816762 Sensitive lineage4.9 None
ERR2514647 Sensitive lineage3 gb
SRR18213796 Sensitive lineage3 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR1180406 Sensitive lineage4.9 None
SRR7755657 Other lineage4.8 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR1180345 Other lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR1180300 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR502474 RR-TB lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR18002974 Other lineage2.2.1 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
ERR4822138 Other lineage4.1.2.1 None
SRR1172717 Sensitive lineage4.9 None
SRR11342669 Other lineage4.8 None
SRR6045191 Sensitive lineage4.9 None
SRR7755655 Other lineage4.1.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
SRR7131229 Other lineage4.1.2.1 None
ERR10796626 Other lineage4.1.2.1 None
SRR7131123 Other lineage4.8 None
ERR4821172 RR-TB lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR867538 Other lineage4.2.2.2 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR3275709 HR-TB lineage3 nl
SRR12708415 HR-TB lineage2.2.1 None
SRR12708371 HR-TB lineage4.1.1.3 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR2446509 Other lineage3 nl
ERR6359066 HR-TB lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
SRR5818647 Other lineage4.3.4.2.1 None
SRR3675389 Other lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR4816852 Other lineage4.9 None
SRR7645901 MDR-TB lineage2.2.1 None
ERR4798769 Other lineage1.1.3.3 None
ERR6359069 Sensitive lineage4.9 None
ERR502945 Sensitive lineage2.2.1 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6359074 HR-TB lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR10796596 Other lineage4.9 None
ERR9117805 Other lineage4.3.2 None
DRR184629 Other lineage2.2.1 None
ERR363509 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR171142 Other lineage3.1.1;lineage4.9 None
ERR4596902 MDR-TB lineage3 None
SRR1180977 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR4596910 Sensitive lineage4.9 None
ERR4814976 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
ERR3797062 RR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR363502 Other lineage4.9 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
SRR9971065 RR-TB lineage2.2.1 None
SRR5341308 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
ERR363447 Other lineage4.9 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR4819383 RR-TB lineage4.9 None
ERR037504 Other lineage4.9.1 None
ERR11465189 RR-TB lineage4.9.1 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR12708416 Sensitive None
SRR1062871 RR-TB lineage4.3.4.2.1 None
ERR349296 Sensitive lineage4.9 None
ERR4769514 Other La1.3 None
SRR5341469 HR-TB lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR1181402 Sensitive lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR12708419 Other lineage4.3.3 None
ERR363456 Sensitive lineage4.9 None
SRR18003023 Other lineage2.2.1 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR7070134 Other lineage3.1.1 None
SRR1181368 Other lineage4.9 None
SRR9971122 MDR-TB lineage4.8 None
SRR1173281 Other lineage3 None
ERR4819462 Sensitive lineage4.9 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR1180355 Sensitive lineage4.9 None
SRR19303907 Other lineage4.8 None
SRR1181214 Other lineage4.9 None
SRR6044952 Other lineage4.9 None
SRR7646018 MDR-TB lineage4.2.1 None
SRR6046141 Other lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
ERR363500 Sensitive lineage4.9 None
ERR10796591 Other lineage4.9 None
ERR4796577 HR-TB None
ERR4816322 Other lineage4.9 None
SRR21240055 Other lineage4.1.2.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR1140716 Other lineage3 None
SRR1175506 Sensitive lineage4.9 None
ERR10796560 Other lineage4.9 None
ERR176580 Sensitive lineage4.3.4.2.1 None
SRR6045359 Sensitive lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
ERR363453 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
ERR4815783 Other lineage4.1.2.1 gb
ERR4819357 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1172807 Sensitive lineage4.9 None
SRR11342640 MDR-TB lineage4.3.3 None
SRR1180440 Other lineage4.9 None
SRR19303820 RR-TB lineage4.8 None
ERR502481 RR-TB lineage4.9 None
SRR21727760 Other lineage2.2.1 None
SRR1159378 Other lineage4.9 None
SRR1173719 Other lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR4769554 RR-TB lineage4.9 None
ERR10796628 Other lineage4.3.3 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341455 Sensitive lineage4.9 None
SRR7069835 Other lineage2.2.1 None
SRR18909918 Other lineage2.2.1.1 None
ERR6866410 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR176741 Other lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR4799547 HR-TB lineage2.2.1 None
SRR1184021 Sensitive lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR10796620 Other lineage4.1.1.1 None
SRR3675514 Sensitive lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR216965 Sensitive lineage4.9 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
SRR16156775 Other lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR11342691 MDR-TB lineage2.2.1 None
SRR5341384 HR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
ERR373945 Sensitive lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR16156817 Other lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR21576622 MDR-TB lineage2.2.1 None
SRR19304104 Other lineage4.8 None
ERR124636 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR502473 RR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR751326 Other lineage4.9 None
SRR6046359 Other lineage4.7 None
ERR867541 MDR-TB lineage4.2.1 None
SRR7131145 Other lineage4.1.2.1 None
ERR363499 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR3675541 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR3468488 Other La1.8.1 None
SRR6046250 Other lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR7236330 Other La1.8.1 None
SRR1180446 Other lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR18003032 Other lineage2.2.1 None
ERR3323729 Sensitive lineage4.4.1.1 None
ERR779852 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR3283006 RR-TB lineage4.9 None
SRR9971168 Other lineage4.3.2.1 None
ERR4815815 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
ERR10796577 Other lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4.9 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR10796635 Other lineage4.8 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
ERR349264 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
SRR18003024 RR-TB lineage2.2.1 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
SRR1181256 Other lineage4.9 None
ERR4769550 Sensitive La1;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR1180312 Sensitive lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR2513405 Other lineage2.2.1 None
SRR18002887 MDR-TB lineage2.2.1.1 None
SRR18002981 Other lineage2.2.1 None
ERR867570 RR-TB lineage4.9 None
ERR10796592 Other lineage4.9 None