EBG00000313339 - n.630T>C
Drug resistance types
4 Sensitive
5 RR-TB
13 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 1 |
| lineage4.1.2.1 | 2 |
| lineage1.2.1.1 | 1 |
| 8 | |
| lineage1.2.2.2 | 1 |
| lineage4 | 4 |
| lineage4.6.2.2 | 2 |
| lineage3 | 7 |
| lineage4.4.1.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.7 | 1 |
| lineage4.3.3 | 1 |
| lineage4.8 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.4.2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 36 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4814976 | Other | lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR21677874 | Sensitive | None | SRR3675456 | HR-TB | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR4816231 | Other | lineage4 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | SRR3675555 | HR-TB | None | ERR4817434 | Other | lineage3 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR3275190 | Other | lineage3 | nl | ERR4818107 | Sensitive | lineage3 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819192 | Other | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | ERR4820746 | RR-TB | lineage3 | None | ERR2446509 | Other | lineage3 | nl | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR2514834 | Other | lineage4.7 | None | ERR4820092 | Other | lineage3 | None | SRR6046299 | HR-TB | None | SRR6855910 | Sensitive | lineage4.3.3 | None | SRR6896147 | Sensitive | lineage4.8 | None | ERR3283021 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445504 | HR-TB | None | ERR387051 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | SRR1181130 | Other | lineage4.1.1.3 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None |
|---|
