EBG00000313325 - n.640delGinsTA
Drug resistance types
5 Sensitive
1 RR-TB
0 HR-TB
2 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.1.2 | 1 |
| lineage4.9 | 23 |
| lineage4.1.2.1 | 2 |
| lineage4.4.1.1 | 2 |
| La1.8.1 | 3 |
| lineage4.2.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.3 | 1 |
| La1.4 | 1 |
| lineage2.2.1 | 3 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage3 | 3 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.2.1.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 47 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20969475 | Other | lineage1.2.1.2 | None | ERR4814976 | Other | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | SRR5818459 | Other | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | SRR7236399 | Other | La1.8.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR5818386 | Other | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | SRR5818425 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR12420628 | MDR-TB | lineage2.2.1 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818455 | Sensitive | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | SRR5818415 | Sensitive | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR7236330 | Other | La1.8.1 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR5818408 | Other | lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR5818414 | Other | lineage4.9 | None | SRR7069931 | Other | lineage4.2.2.2 | None | SRR5818394 | Other | lineage4.9 | None | SRR7617847 | Other | La1.8.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR2446509 | Other | lineage3 | nl |
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