EBG00000313325 - n.278A>G
Drug resistance types
11 Sensitive
13 RR-TB
3 HR-TB
11 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
74 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 5 |
| lineage4.3.3 | 7 |
| lineage2.2.1 | 13 |
| lineage4.9 | 16 |
| lineage3 | 10 |
| lineage4.2.2 | 2 |
| lineage2.2.1.1 | 3 |
| lineage1.2.1.2 | 1 |
| lineage4.1.2.1 | 11 |
| lineage2.2 | 1 |
| lineage4.5 | 5 |
| lineage4.4.2 | 1 |
| 1 | |
| lineage3.1.1 | 2 |
| lineage4.1.1 | 1 |
| lineage4 | 4 |
| lineage1.1.2 | 3 |
| lineage1.1.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage6.2.3 | 1 |
| lineage4.4.1.1 | 5 |
| lineage4.3.2 | 1 |
| lineage4.8.2 | 2 |
| lineage1.1.3.1 | 2 |
| lineage3.1.2 | 1 |
| lineage4.3.1.1 | 2 |
| lineage6.1.3 | 1 |
| lineage4.7 | 2 |
| lineage3.1.2.2 | 2 |
| lineage4.2.2.2 | 2 |
| lineage3.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.6 | 1 |
| La1.8.1 | 1 |
| lineage4.9;La1.3 | 1 |
| La1.2 | 1 |
| La1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 120 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9117747 | HR-TB | lineage4.8 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315486 | MDR-TB | lineage2.2.1 | None | SRR10315635 | RR-TB | lineage2.2.1 | None | SRR1173311 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR15014619 | Pre-XDR-TB | lineage3 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR4814821 | Other | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR22424753 | MDR-TB | lineage3 | None | ERR4815118 | Other | lineage2.2 | None | SRR1723899 | Sensitive | lineage4.5 | cn | ERR4815281 | Other | lineage4.4.2 | None | SRR22175240 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR22424771 | Sensitive | lineage3 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4815310 | Other | None | ERR4815334 | Other | lineage3.1.1 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR4814709 | Other | lineage4.1.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4815792 | Other | lineage4.1.2.1 | None | ERR4815550 | Other | lineage4 | None | ERR4814976 | Other | lineage4.9 | None | ERR4818949 | Sensitive | lineage3.1.1 | None | ERR4816001 | Other | lineage3 | None | ERR4816417 | Other | lineage4.9 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4816907 | Other | lineage1.1.1 | None | ERR4818797 | Other | lineage4.5 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4815956 | Other | lineage1.1.2 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816231 | Other | lineage4 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816403 | Other | lineage6.2.3 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4820318 | Other | lineage4.2.2 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4817533 | Sensitive | lineage4.1.2.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4820290 | Other | lineage3 | None | ERR4820729 | Other | lineage2.2.1 | None | ERR4819842 | Other | lineage4.1.2.1 | None | ERR4820369 | Other | lineage2.2.1 | None | SRR6152838 | Other | lineage2.2.1.1 | ca | ERR4820829 | Other | lineage4.8 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4820614 | Other | lineage3.1.2 | None | ERR4820918 | Other | lineage4.9 | None | ERR4821438 | Other | lineage3 | None | SRR6045445 | Other | lineage4.3.1.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821325 | Other | lineage3 | None | ERR4822222 | Other | lineage3.1.2.2 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6045642 | Other | lineage3.1.2.2 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR6045778 | Other | lineage3.1 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6044993 | Other | lineage3 | None | ERR4829360 | Sensitive | lineage4.7 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046250 | Other | lineage4.9 | None | ERR2179662 | Sensitive | lineage4.5 | cn | SRR6046291 | Other | lineage3 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR4814905 | Sensitive | lineage4.8 | gb | ERR2503533 | Other | lineage4.1.2.1 | fi | SRR7131047 | MDR-TB | lineage4.3.3 | None | ERR4817948 | Other | lineage3 | gb | ERR323035 | Sensitive | lineage4.9 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR4818431 | Other | lineage1.1.2 | gb | ERR4818432 | HR-TB | lineage4.5 | gb | ERR10796564 | Other | lineage4.3.3 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796597 | Other | lineage4 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR4821725 | Sensitive | lineage4.8.2 | gb | ERR4821718 | Sensitive | lineage4.2.2.2 | gb | ERR4769419 | Other | lineage4.9 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4178161 | Other | lineage4.4.1.1 | None | ERR4187995 | Other | La1.8.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR6865446 | Other | lineage4.4.1.1 | None | ERR4769478 | Other | La1.2 | None | ERR4769495 | Other | La1.3 | None |
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