EBG00000313339 - n.2096C>T


Drug resistance types
21 Sensitive 36 RR-TB 46 HR-TB 25 MDR-TB 16 Pre-XDR-TB 0 XDR-TB 127 Other
lineage Counts
lineage Count
lineage4.8 48
lineage4.9 76
lineage2.2.1 27
lineage4.2.1 9
lineage3;lineage4.9 1
lineage1.1.3.1 2
3
lineage4.4.1.2 1
lineage4.1.1.3 5
lineage3.1.3 1
lineage4.2.2.2 2
lineage4.8;lineage4.9 2
lineage4.1.2.1 11
lineage4.3.3 3
lineage2.2.1.2 1
lineage1.2.1.1 3
lineage4.1.1.1 1
lineage4.3 1
lineage3;lineage4 1
lineage2.2.1.1 5
lineage6.1.3 1
lineage5.2 2
lineage4.4 1
lineage4.4.1.1 3
lineage3 8
lineage1.1.2 2
lineage3.1.2;lineage4.1.1.3.1 1
lineage4.7 1
La1.3 1
La3;lineage4.9 8
lineage4.1.2 2
lineage1.1.1.1 1
lineage4.1.1.3.1 2
La1.7;lineage4.9;lineage6 1
lineage4.3.4.2 1
lineage1.2.2.2 2
lineage4.3.4.2.1 1
lineage2.2;lineage4.9 1
lineage4.3.4.1 1
lineage4.3.2.1 1
lineage4 2
lineage2.1;lineage4.9 1
lineage6 1
lineage4.3.2 1
La1.2 2
La1.8.1 4
lineage1.1.1 1
La1;lineage4.1.2 1
lineage2.2.1;lineage4.9 1
La3;lineage4 1
lineage4.6.2.2 2
lineage4.1.1.2 1
lineage2.2.1;lineage4.2.1 1
lineage4.4.2 1
La1;lineage4.9 1
lineage2.2;lineage4 1
lineage1.1.3.2 1
lineage4.6.1.1 1
lineage2.2.2 1
La1.7.X-unk4 1
lineage3.1.1 1
spoligotype Counts
spoligotype Count
None 271
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2229147 Other lineage4.8 None
ERR502510 HR-TB lineage4.9 None
ERR978726_ERR978727 RR-TB lineage4.8 None
SRR6045892 Sensitive lineage4.9 None
SRR18002908 Other lineage2.2.1 None
SRR7646014 MDR-TB lineage4.2.1 None
SRR5341396 Other lineage3;lineage4.9 None
SRR5709926 MDR-TB lineage2.2.1 None
SRR7645924 Pre-XDR-TB lineage4.2.1 None
ERR4796929 Sensitive lineage4.9 None
ERR978761 Other lineage4.8 None
ERR736856 HR-TB lineage4.9 None
SAMEA3501046 RR-TB lineage4.8 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR8692887 Other None
SRR1173568 Sensitive lineage4.9 None
ERR4816852 Other lineage4.9 None
SRR6397733 Other lineage4.4.1.2 None
ERR978733 RR-TB lineage4.8 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR2513382 RR-TB lineage4.1.1.3 None
ERR2513121 Sensitive lineage3.1.3 None
SRR7069931 Other lineage4.2.2.2 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR978756 Other lineage4.8 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR5341298 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR702405 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR978694_ERR978693 Other lineage4.8 None
ERR4822138 Other lineage4.1.2.1 None
SRR8692807 Other lineage4.9 None
SRR7755655 Other lineage4.1.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR6866410 HR-TB lineage4.9 None
SRR7535082 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR7755642 MDR-TB lineage4.2.1 None
SRR19303840 Sensitive lineage1.2.1.1 None
ERR978757 RR-TB lineage4.8 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR3275941 RR-TB lineage4.3 nl
SRR5341300 HR-TB lineage4.9 None
SRR7131152 MDR-TB lineage2.2.1 None
ERR323115 Sensitive lineage4.9 None
SRR3675230 Other lineage3;lineage4 None
SRR7645927 Other lineage4.8 None
SRR10315579 Other lineage2.2.1.1 None
ERR9787256 Other lineage6.1.3 None
ERR978762 Other lineage4.8 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR4819002 HR-TB lineage4.8 None
SRR16627752 RR-TB lineage4.4 None
ERR4816868 Other lineage4.4.1.1 None
ERR1063883 HR-TB lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR18213736 Other lineage3 None
SRR5341310 Other lineage1.1.2 None
SRR7645972 MDR-TB lineage4.2.1 None
ERR323066 HR-TB lineage4.9 None
ERR5979454 Pre-XDR-TB lineage3 None
ERR2514430 Other lineage3.1.2;lineage4.1.1.3.1 None
SRR8692782 Other lineage4.9 None
SRR7645928 Other lineage4.7 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR1180996 Other lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SAMEA3450033 Other lineage4.8 None
ERR4818052 Sensitive lineage1.2.1.1 gb
ERR323062 HR-TB lineage4.9 None
ERR3275190 Other lineage3 nl
ERR4769495 Other La1.3 None
SRR10808490 Sensitive lineage2.2.1.1 None
SRR5153833 Other lineage2.2.1 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR323107 HR-TB lineage4.9 None
SRR9613550 HR-TB lineage4.1.2.1 None
ERR3283014 Other La3;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR4821616 Other lineage1.1.3.1 None
SRR1173719 Other lineage4.9 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
ERR2512423 Other lineage4.1.1.3 None
SRR11342658 RR-TB lineage4.1.2 None
SRR1158918 Other lineage4.9 None
ERR978734 RR-TB lineage4.8 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR1173777 Sensitive lineage4.9 None
ERR4872077 Pre-XDR-TB lineage5.2 None
ERR2514351 Sensitive lineage3 gb
ERR736834 HR-TB lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR1735598 RR-TB lineage4.9 None
ERR978754 RR-TB lineage4.8 None
ERR978760 RR-TB lineage4.8 None
SRR5341469 HR-TB lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
SRR7070157 Other lineage4.1.1.3.1 None
ERR1063896 HR-TB None
ERR4817069 RR-TB None
SAMEA3501065 RR-TB lineage4.8 None
ERR137286 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR6358979 HR-TB lineage4.9 None
ERR4819175 Other lineage4.1.1.3 gb
ERR4797474 Other lineage4.9 None
SRR6044952 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR7069922 Other lineage2.2.1 None
SRR8692894 Other lineage4.9 None
ERR4815783 Other lineage4.1.2.1 gb
ERR978694 Other lineage4.8 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR7645971 Other lineage2.2.1 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR8692858 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
ERR2229436 Other lineage4.8 None
ERR978747 Other lineage4.8 None
ERR9786592 Other lineage4.3.4.2 None
DRR184629 Other lineage2.2.1 None
SRR7069784 Other lineage1.2.2.2 None
SRR18909918 Other lineage2.2.1.1 None
ERR978726 RR-TB lineage4.8 None
ERR4769433 RR-TB lineage4.9 None
SAMEA3501015 Other lineage4.8 None
ERR3283031 Other La3;lineage4.9 None
ERR983238 MDR-TB lineage2.2.1.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR4817434 Other lineage3 None
ERR2446509 Other lineage3 nl
SRR5341384 HR-TB lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
ERR978748 Other lineage4.8 None
ERR10796563 Other lineage4.3.3 None
SRR6046250 Other lineage4.9 None
ERR867554 Other lineage4.3.4.1 None
SRR7070293 Other lineage4.8 None
SRR3675245 Other lineage4.1.2.1 None
ERR978727 Other lineage4.8 None
SRR5341308 HR-TB lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
ERR4821769 Other lineage4.1.2.1 None
SRR5341461 HR-TB lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR8692893 Other lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
SRR5341323 Sensitive lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR7646018 MDR-TB lineage4.2.1 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4814976 Other lineage4.9 None
ERR978751 Other lineage4.8 None
SAMEA3501063 RR-TB lineage4.8 None
ERR4796254 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR5818672 Other lineage1.2.2.2 None
ERR9787362 Sensitive lineage6 None
SRR10808399 Sensitive lineage4.9 None
ERR4818272 Other lineage4.3.2 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR2228900 Other lineage4.8 None
ERR4769418 Other La1.2 None
SRR7236330 Other La1.8.1 None
ERR4817554 Other lineage1.1.1 None
SRR9970978 Other La1;lineage4.1.2 None
ERR911929 Other lineage4.8 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
SRR5341467 Other lineage4.9 None
SRR7851312 Other La1.2 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR8692898 Other lineage4.9 None
SAMEA3501070 RR-TB lineage4.8 None
DRR034348 Other lineage2.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR18002987 Other lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502511 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR2514215 Other lineage2.2.1 gb
ERR3806850 HR-TB lineage4.1.2.1 None
SRR11444077 Sensitive lineage4.6.2.2 None
ERR978755 RR-TB lineage4.8 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR7069473 Other lineage4.1.1.2 None
SRR7755657 Other lineage4.8 None
ERR911929_ERR911930 Other lineage4.8 None
ERR4769530 RR-TB lineage4.9 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4816702 Other lineage4.6.2.2 None
ERR4798099 HR-TB lineage4.9 None
SRR7645977 MDR-TB lineage4.2.1 None
SRR16156697 RR-TB lineage2.2.1 None
SRR1159378 Other lineage4.9 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1791747 Other La1.8.1 None
SRR7617847 Other La1.8.1 None
ERR6866639 HR-TB lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR10315466 RR-TB lineage2.2.1 None
ERR4457829 MDR-TB lineage4.1.2.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4816322 Other lineage4.9 None
ERR867575 Other lineage4.9 None
SRR8651616 MDR-TB lineage2.2.1 None
ERR3283044 Other lineage4 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
ERR4769508 RR-TB lineage4.9 None
ERR978735 Other lineage4.8 None
ERR2503533 Other lineage4.1.2.1 fi
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR7755652 Pre-XDR-TB lineage2.2.1;lineage4.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR20969542 Other lineage4.4.2 None
SRR14801749 HR-TB lineage4.9 None
SRR7236177 Other La1.8.1 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR124636 HR-TB lineage4.9 None
SRR7645901 MDR-TB lineage2.2.1 None
ERR911930 Other lineage4.8 None
ERR3283011 Other La3;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR7645906 Other lineage2.2.1 None
SRR7645899 Other lineage2.2.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR1035122 HR-TB lineage4.9 None
ERR978693 Other lineage4.8 None
ERR5865106 MDR-TB lineage4.2.1 None
SRR8692863 Other lineage2.2;lineage4 None
ERR2514801 Other lineage1.1.3.2 gb
ERR2228910 Other lineage4.8 None
SRR5341453 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
SAMEA3501067 RR-TB lineage4.8 None
DRR185024 Other lineage2.2.2 None
SRR6044904 Other lineage3 None
ERR3445487 Other La1.7.X-unk4 None
SRR6045158 Other lineage4.9 None
ERR978752 Other lineage4.8 None
SRR16156775 Other lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
ERR4814905 Sensitive lineage4.8 gb
ERR978746 RR-TB lineage4.8 None
ERR978750 RR-TB lineage4.8 None
SRR5341425 Other lineage4.9 None
SRR1173310 Other lineage3.1.1 None