EBG00000313339 - n.507C>T
Drug resistance types
14 Sensitive
31 RR-TB
4 HR-TB
34 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
64 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 34 |
| lineage3.1.2.1 | 1 |
| lineage4.2.1.1 | 11 |
| lineage4.4.1.1 | 4 |
| lineage4.3.4.2 | 2 |
| lineage4.4.2 | 3 |
| lineage2.2.2 | 4 |
| lineage4.8 | 7 |
| lineage4.3.3 | 8 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1 | 23 |
| lineage4.1.1.1 | 3 |
| La2 | 1 |
| lineage4.7 | 1 |
| lineage3;lineage4 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage3 | 5 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.2.2.2 | 3 |
| lineage3.1.1 | 2 |
| lineage4.3.4.2.1 | 5 |
| lineage4.1.1.3 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.2.1 | 5 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.4 | 1 |
| lineage4.1.2.1;lineage4.9 | 2 |
| lineage4.1.3 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage6.1.1 | 2 |
| lineage4.1.2 | 1 |
| lineage1.1.1.1 | 1 |
| 1 | |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.8.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4 | 1 |
| lineage4.3 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.3.3;lineage4.8 | 2 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.4.1.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 159 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6044952 | Other | lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SAMN02058524 | Sensitive | lineage4.2.1.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR1163105 | Sensitive | lineage4.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342669 | Other | lineage4.8 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR7755655 | Other | lineage4.1.2.1 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR14801407 | Sensitive | lineage4.2.1.1 | None | ERR867575 | Other | lineage4.9 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR13888750 | Other | La2 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR7645928 | Other | lineage4.7 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR1168991 | Sensitive | lineage4.2.1.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1173281 | Other | lineage3 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR1173719 | Other | lineage4.9 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184329 | Other | lineage4.9 | None | SRR1172224 | Sensitive | lineage4.2.1.1 | None | SRR924715 | Sensitive | lineage4.2.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR1173185 | Other | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR7131123 | Other | lineage4.8 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR1163371 | Sensitive | lineage4.2.1.1 | None | ERR867572 | Other | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11342646 | HR-TB | lineage3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | SRR19303907 | Other | lineage4.8 | None | SRR1577831 | MDR-TB | lineage6.1.1 | None | ERR867567 | RR-TB | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | SRR14801789 | Sensitive | lineage4.2.1.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR10796589 | Other | lineage4.9 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR4817069 | RR-TB | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR10796635 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR958492 | Sensitive | lineage4.2.1.1 | None | SRR3675265 | Other | lineage4 | None | SRR1577820 | MDR-TB | lineage6.1.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR867573 | Other | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | ERR10796591 | Other | lineage4.9 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR6046087 | Sensitive | lineage4.9 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR10796560 | Other | lineage4.9 | None | ERR10796577 | Other | lineage4.9 | None | SAMN02419632 | Sensitive | lineage4.2.1.1 | by | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR10796598 | Other | lineage4.9 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023509 | MDR-TB | lineage4.9 | None | ERR4817915 | Other | lineage4.9 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1196478 | Other | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR867569 | Other | lineage4.9 | None |
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