EBG00000313339 - n.3004A>G
Drug resistance types
101 Sensitive
32 RR-TB
38 HR-TB
33 MDR-TB
18 Pre-XDR-TB
0 XDR-TB
96 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 24 |
| lineage4;lineage2 | 2 |
| lineage4.6.1.2 | 6 |
| lineage4.4.1.1 | 7 |
| lineage4.9 | 106 |
| lineage3 | 17 |
| lineage4.2.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.8 | 13 |
| lineage1 | 2 |
| lineage4.3.4.2 | 3 |
| lineage4 | 22 |
| lineage3.1.2.1 | 2 |
| lineage4.1.2.1 | 13 |
| lineage4.2.2.2 | 2 |
| lineage6.3.1 | 1 |
| lineage4.3.3 | 4 |
| lineage1.1.1 | 2 |
| lineage1.1.2 | 3 |
| lineage1.1.3.1 | 1 |
| 12 | |
| lineage4.1.2 | 5 |
| lineage3.1.1 | 2 |
| lineage4.1.1 | 4 |
| lineage4.1.1.3 | 4 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.8.1 | 2 |
| lineage2.2 | 3 |
| lineage4.3.2.1 | 3 |
| lineage4.4.1 | 1 |
| lineage5.1.4 | 1 |
| lineage5.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.7 | 2 |
| lineage4.4.2 | 1 |
| lineage4.3.4.2.1 | 7 |
| lineage4.1 | 1 |
| La1.8.1 | 3 |
| La1.3 | 6 |
| lineage4.9;La1.3 | 2 |
| La1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.8;lineage4.3.3 | 1 |
| La1.6 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 2 |
| La1.7.1 | 1 |
| La1.4 | 1 |
| lineage3.1.3 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.3.4 | 1 |
| lineage4.6.5 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage5 | 1 |
| lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 318 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR228175 | Sensitive | lineage3 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818988 | Other | lineage1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR2432997 | Other | lineage4.8 | None | ERR4818176 | Other | lineage4.1.2.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818869 | Other | lineage4.2.2.2 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4818561 | HR-TB | lineage4 | None | ERR2513259 | Other | lineage3 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818538 | Other | lineage3 | gb | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR5153236 | MDR-TB | lineage2.2.1 | None | SRR5152904 | Other | lineage2.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5152926 | MDR-TB | lineage2.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819456 | Other | lineage4.8 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4819462 | Other | lineage4 | None | ERR4819834 | Other | lineage4.8 | gb | ERR4819533 | Other | lineage1.1.2 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820829 | Other | lineage4.8 | None | ERR4820833 | HR-TB | None | ERR4820161 | Other | lineage3 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR2515230 | Sensitive | lineage4.8 | None | ERR4820922 | Other | lineage4.1.2.1 | gb | SRR6045424 | Other | lineage1.1.2 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045480 | Other | lineage4.1.1 | None | ERR4821054 | Other | lineage3 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821214 | RR-TB | None | SRR6046141 | Other | lineage4.9 | None | ERR4821409 | Other | lineage4.8 | None | ERR4822200 | Other | lineage4.3.4.1 | gb | ERR4822085 | Other | lineage4.8 | gb | ERR4821679 | Other | lineage4.3.3 | None | SRR6046385 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | SRR6046815 | Other | lineage3 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | ERR485006 | HR-TB | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | SRR6982410 | Other | lineage4.8.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6981962 | Sensitive | None | SRR6981912 | Sensitive | None | SRR6981918 | Sensitive | lineage4.4.1 | None | ERR323036 | HR-TB | None | SRR6982070 | RR-TB | None | ERR502507 | Sensitive | lineage5.1.4 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR7496471 | Sensitive | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR8346061 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796559 | Other | lineage4.9 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR1063855 | Other | lineage4 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR1082121 | Sensitive | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR3324329 | HR-TB | lineage4.1.1.3 | None | ERR3324345 | RR-TB | lineage4.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4596910 | Sensitive | lineage4 | None | ERR144568 | Pre-XDR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4796577 | MDR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4798262 | HR-TB | La1 | None | ERR6197022 | Other | lineage4.9 | None | ERR6197040 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR718268 | Sensitive | lineage1.1.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049672 | Other | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11294512 | Other | La1.8.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173719 | HR-TB | lineage3 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR124452 | HR-TB | lineage2 | None | SRR1792247 | Other | La1.7.1 | None | SRR16278274 | Other | La1.4 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR20632814 | Sensitive | lineage4 | None | SRR2100532 | Sensitive | lineage3 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | ERR190388 | Sensitive | lineage4.9 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | ERR4815777 | Other | lineage4.9 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR161125 | Sensitive | lineage4.3.4 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4815471 | Other | lineage4.9 | None | ERR1750909 | RR-TB | lineage4.1.1.2 | None | ERR4814690 | Sensitive | lineage2.2.1 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR4815550 | Other | lineage4 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675509 | Other | lineage4.9 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4817526 | Other | lineage4.4.1.1 | gb | ERR4816964 | Other | lineage4.9 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4816101 | Other | lineage4.1.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR216965 | HR-TB | lineage4.9 | None | ERR216949 | Sensitive | lineage4 | None | ERR4816688 | Other | lineage4.2.2.2 | gb | ERR4816711 | Sensitive | lineage4.1.1 | gb | SRR4033203 | Sensitive | lineage4.9 | None |
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