EBG00000313339 - n.3004A>G
Drug resistance types
79 Sensitive
18 RR-TB
23 HR-TB
25 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
45 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 2 |
| lineage4.9 | 80 |
| lineage3 | 10 |
| lineage4.4.1.1 | 4 |
| lineage4.1.1.3 | 5 |
| lineage4.3.4.2.1 | 6 |
| lineage3;lineage4 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage2.2.1 | 20 |
| lineage4.1 | 1 |
| La1.3 | 3 |
| lineage4.6.1.2 | 4 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.4.1.1.1 | 3 |
| La1.8.1 | 1 |
| 1 | |
| lineage4 | 3 |
| La1.7.1 | 1 |
| La1.6 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage6.3.1 | 1 |
| lineage4.1.2 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.8 | 5 |
| lineage4.3.3 | 3 |
| lineage4.1.1.1 | 2 |
| lineage4.1.2.1 | 4 |
| lineage2.2.2 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| La1.4 | 1 |
| La1.2.BCG | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.8.1 | 3 |
| lineage4.3.2.1 | 6 |
| lineage4.2.2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1.1;lineage4.9 | 1 |
| lineage4.3.4.1 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.7 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 200 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR323037 | Other | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR1180413 | Sensitive | lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821054 | Sensitive | lineage3 | None | ERR3324345 | RR-TB | lineage4.1 | None | ERR4769555 | Sensitive | La1.3 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1181214 | Other | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4816322 | Other | lineage4.9 | None | SRR1140716 | Other | lineage3 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR10993951 | RR-TB | La1.6 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR6982115 | Sensitive | lineage4.3.2 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR5152926 | MDR-TB | lineage2.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR867569 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982257 | Sensitive | lineage4.1.2.1 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4769493 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR1181319 | Sensitive | lineage2.2.1 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | SRR1181136 | Sensitive | lineage2.2.1 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR6045832 | Other | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR5153236 | MDR-TB | lineage2.2.1 | None | ERR1063855 | Other | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6982297 | Sensitive | lineage4.1.1.1;lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR4816852 | Other | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR6982410 | Sensitive | lineage4.8.1 | None | ERR867572 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4769514 | Other | La1.3 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6982178 | Sensitive | lineage2.2.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2513259 | Other | lineage3 | None | ERR4769408 | Other | La1.3 | None | ERR176741 | Other | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR4033203 | Sensitive | lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR6981962 | Sensitive | lineage4.3.2.1 | None | ERR4816470 | HR-TB | lineage3 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR10040408 | MDR-TB | lineage2.2.1 | None |
|---|
