EBG00000313325 - n.1256C>T
Drug resistance types
48 Sensitive
37 RR-TB
18 HR-TB
13 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
215 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 7 |
| lineage4.3.4.1 | 3 |
| lineage4.3.4;lineage4.3.3 | 1 |
| lineage1.1.2 | 13 |
| lineage4.9;lineage4.4.2 | 1 |
| lineage2.2.1 | 23 |
| La1.7.1 | 1 |
| lineage2.2.2 | 2 |
| lineage3 | 65 |
| lineage3.1.2 | 3 |
| lineage4.4.1.2 | 1 |
| lineage4.3.3 | 12 |
| lineage4.2.2.2 | 5 |
| lineage4.8 | 18 |
| lineage4.3.4.2.1 | 7 |
| lineage4 | 5 |
| lineage4.4.2 | 1 |
| lineage4.1.2.1 | 42 |
| La1.6 | 2 |
| lineage4.6.2.2 | 8 |
| lineage3.1 | 2 |
| lineage4.1 | 3 |
| lineage4.1.1 | 6 |
| lineage4.6 | 2 |
| lineage3.1.1 | 11 |
| lineage4.2.1 | 5 |
| lineage4.9 | 19 |
| lineage1.1.3 | 2 |
| lineage1.2.1.1 | 1 |
| 8 | |
| lineage4.6.1.2 | 1 |
| lineage4.3.4.2 | 4 |
| lineage4.7 | 5 |
| lineage4.1.1.3.1 | 6 |
| lineage4.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.2.1.1 | 1 |
| lineage1.1.1 | 2 |
| lineage1 | 2 |
| lineage4.5 | 4 |
| lineage1.2.1.2.1 | 1 |
| lineage3.1.3 | 3 |
| lineage4.3.2 | 4 |
| lineage4.4.1.1 | 8 |
| lineage4.3.3;lineage3 | 1 |
| lineage1.2.2.2 | 2 |
| lineage3.1.2.1 | 2 |
| lineage4.6.2 | 1 |
| lineage4.3.1.1 | 3 |
| lineage4.6.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.3.1 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.6.5 | 1 |
| lineage2.2 | 1 |
| La1.8.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 342 |
Geographic prevalence
Country level data for this variant is available for 103 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10315693 | RR-TB | lineage4.1.2 | None | ERR9786258 | Sensitive | lineage4.3.4.1 | None | SRR12830370 | Sensitive | lineage4.3.4;lineage4.3.3 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR13199738 | Other | La1.7.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18213726 | Other | lineage3 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR22175227 | Pre-XDR-TB | lineage3 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | SRR22424743 | Pre-XDR-TB | lineage1.1.2 | None | ERR4815104 | Other | lineage4.8 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | ERR4815613 | Other | lineage3 | None | ERR4815268 | Other | lineage4.8 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR4814312 | Other | lineage4 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | ERR4815359 | Sensitive | lineage4.1.2.1 | None | ERR4814355 | Other | La1.6 | gb | ERR4814399 | Other | lineage4.6.2.2 | gb | ERR4814496 | RR-TB | lineage4.1.2 | None | ERR4815427 | HR-TB | lineage3.1 | gb | ERR4814554 | Other | lineage4.1 | None | ERR4814524 | Other | lineage4.1.1 | gb | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | ERR4814674 | Sensitive | lineage3 | gb | ERR176450 | Sensitive | lineage4.1.1 | None | ERR181749 | Sensitive | lineage4.3.4.2.1 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814699 | HR-TB | lineage4.1.2.1 | gb | ERR4814714 | Other | lineage3 | None | ERR4815467 | Other | lineage3 | None | ERR4814841 | Other | lineage4.1 | None | ERR4814874 | MDR-TB | lineage1.1.2 | None | ERR4814901 | Other | lineage2.2.1 | gb | ERR4815738 | Other | lineage3 | None | ERR4814911 | Other | lineage4.3.3 | None | SRR3675291 | Sensitive | lineage4.6 | gb | ERR4815065 | Other | lineage4.1.2.1 | gb | ERR4815898 | Other | lineage3 | None | ERR4816009 | Other | lineage1.1.2 | None | ERR4815909 | Other | lineage4.8 | None | ERR4815944 | HR-TB | lineage4.1.2.1 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4815917 | Other | lineage2.2.1 | gb | ERR4816968 | Other | lineage4.2.1 | gb | ERR4815994 | Other | lineage3 | gb | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816086 | Other | lineage4.2.2.2 | None | ERR4816093 | Other | lineage1.1.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816183 | Other | None | ERR4816283 | Other | lineage4.1.2.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816231 | Other | lineage4 | None | ERR4817478 | Other | lineage3 | None | SRR3675565 | Other | lineage3 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816334 | Other | lineage4.6.2.2 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4816350 | Other | lineage4.9 | gb | ERR4816422 | Other | lineage4.1.1 | gb | ERR4817392 | Other | lineage4.1.2.1 | gb | ERR4816464 | Other | lineage3 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4816545 | Other | None | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR4816608 | Other | lineage2.2.1 | None | ERR4816649 | Other | lineage3 | None | ERR4816606 | Sensitive | lineage4.3.4.2 | gb | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816696 | Other | lineage3 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816736 | Other | lineage4.8 | gb | ERR4817206 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4816756 | RR-TB | None | ERR4817213 | Other | lineage3 | gb | ERR4816866 | Other | lineage2.2.1 | None | ERR4816782 | Other | lineage4.1.2.1 | None | ERR4816770 | Other | lineage3 | gb | ERR4817294 | Other | lineage4.1.2 | None | ERR4817452 | Other | lineage4.8 | None | ERR4817306 | Other | lineage3 | gb | ERR2179737 | HR-TB | lineage4.2 | None | ERR4816933 | Other | lineage4.1.1.3 | None | ERR4817730 | Other | lineage4.2.1.1 | gb | ERR4817703 | Other | lineage1.1.1 | None | ERR4818988 | Other | lineage1 | None | ERR4818685 | Other | lineage4.6.2.2 | None | ERR4818698 | HR-TB | lineage2.2.1 | gb | ERR4817803 | Other | lineage4.2.2.2 | None | ERR4816425 | Other | lineage2.2.2 | None | ERR4817874 | Other | lineage3 | None | ERR4817834 | Other | lineage1.1.2 | gb | ERR4817915 | RR-TB | lineage4.9 | None | ERR2513056 | HR-TB | lineage4.1.2.1 | gb | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR2513401 | HR-TB | lineage3 | None | ERR4818752 | Other | lineage3 | None | ERR4818753 | Other | lineage3 | gb | ERR4817998 | Other | lineage3 | None | ERR4818000 | Other | lineage3.1.1 | gb | ERR4818050 | Other | lineage4.6.2.2 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4818763 | Other | lineage3 | gb | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818064 | Other | lineage4.8 | None | ERR4818065 | Other | lineage4.1.2.1 | None | ERR2515055 | Other | lineage3 | None | ERR2512443 | Other | lineage4.8 | gb | ERR4818797 | Other | lineage4.5 | None | ERR4818104 | Other | lineage4.1.2 | gb | ERR4818170 | Other | lineage4.1.2.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818801 | Other | lineage4.7 | gb | ERR4818126 | RR-TB | lineage1 | None | ERR2513450 | Other | lineage1.2.1.2.1 | gb | ERR4818188 | Other | lineage4.1.2.1 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR2512536 | Other | lineage3.1.3 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818855 | Other | lineage4.1.2.1 | gb | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818208 | Other | lineage4.1.1.3.1 | gb | ERR4819041 | Sensitive | lineage4.3.3 | gb | ERR4818287 | Other | lineage4.5 | gb | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR2512599 | Other | lineage3 | gb | ERR3148155 | Sensitive | lineage4.3.2 | None | ERR4818918 | Other | lineage1.1.2 | gb | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818922 | Sensitive | lineage3 | None | ERR2512693 | Other | lineage1.1.2 | gb | ERR4819087 | Other | lineage4.3.3 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4818530 | Other | lineage2.2.1 | gb | ERR4818431 | Other | lineage1.1.2 | gb | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR2509886 | RR-TB | lineage3 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR4818538 | Other | lineage3 | gb | ERR4818556 | Other | lineage3 | None | ERR4817568 | Other | lineage4.1.2.1 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR2512884 | Other | lineage4.6.2.2 | gb | ERR4818948 | Sensitive | lineage4.3.3 | gb | SRR5007170 | RR-TB | lineage4.9 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4817619 | Other | lineage4.1.2.1 | gb | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR2513589 | Other | lineage3.1.3 | None | ERR4818629 | Other | lineage4.3.3;lineage3 | gb | ERR4819096 | Other | lineage4.4.1.1 | None | ERR2513652 | Sensitive | lineage4.1.1.3.1 | gb | ERR2513657 | Other | lineage1.2.2.2 | gb | ERR4820717 | Other | lineage1.1.3 | None | ERR4819140 | Other | lineage4.1.2.1 | None | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR4820256 | Other | lineage2.2.1 | None | ERR4819181 | Other | lineage3 | gb | ERR2513830 | RR-TB | lineage4.8 | None | ERR2513903 | Other | lineage4.4.1.1 | gb | ERR2513949 | Other | lineage3 | gb | ERR4819324 | Other | lineage4.8 | gb | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4820324 | Other | lineage4 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR2514173 | Other | lineage4.5 | gb | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820742 | Other | lineage4.3.4.2.1 | None | ERR4819518 | Other | lineage4.1.1 | None | ERR2514261 | Other | lineage3 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4820748 | Other | lineage3 | None | ERR4819522 | Other | lineage4.2.1 | gb | ERR4820397 | Other | lineage4.9 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819565 | Sensitive | lineage4.8 | None | ERR4819561 | Sensitive | lineage4.1.2.1 | gb | ERR2514377 | Sensitive | lineage4.5 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4819655 | Other | lineage4.8 | None | ERR2514565 | Other | lineage3.1.2.1 | gb | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR2514514 | RR-TB | lineage3 | gb | ERR2514522 | Other | lineage3 | gb | ERR4819734 | RR-TB | lineage3 | gb | ERR4820777 | Other | lineage4.1.2.1 | None | ERR2514550 | MDR-TB | lineage3 | gb | ERR4819765 | Other | lineage4.1 | None | ERR2514630 | Other | lineage3.1.2.1 | gb | ERR2513819 | Pre-XDR-TB | lineage4.3.3 | gb | ERR2514645 | Other | lineage4.3.4.1 | None | ERR2514753 | Other | lineage3 | None | ERR2514756 | Other | lineage3 | gb | ERR2514834 | Other | lineage4.7 | None | ERR2514803 | Sensitive | lineage4.6.2 | gb | ERR2514949 | Sensitive | lineage3 | gb | ERR2514854 | Other | lineage4.3.3 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR4819980 | Other | lineage4.1.2.1 | None | ERR4820880 | Other | lineage4.2.2.2 | gb | ERR2514959 | Sensitive | lineage4.2.1 | gb | ERR2514968 | Other | lineage4.3.3 | None | ERR2515013 | Sensitive | lineage2.2.1 | None | ERR4820026 | Other | lineage3 | None | ERR4820833 | HR-TB | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820895 | HR-TB | lineage4.3.4.2.1 | gb | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820107 | RR-TB | None | ERR4820122 | Other | lineage4.3.1.1 | None | ERR4820675 | Sensitive | lineage4.9 | None | ERR4820690 | Other | lineage4.1.1 | gb | ERR4820684 | Other | lineage3 | gb | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4820188 | Other | lineage3 | gb | ERR4820922 | Other | lineage4.1.2.1 | gb | ERR4820907 | Other | lineage4.1.2.1 | gb | ERR4820968 | Other | lineage4.1.2.1 | gb | ERR4821020 | Other | lineage4.1.1.3.1 | None | ERR4821154 | Other | lineage2.2.1 | gb | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR4821039 | Other | lineage3 | gb | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6045432 | Other | lineage3 | gb | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821127 | HR-TB | lineage4.6.2.2 | gb | ERR2660495 | Sensitive | lineage1.2.2.2 | None | ERR4821879 | Other | lineage4.6.1.1 | None | ERR4821167 | Other | lineage4.8 | gb | ERR4821286 | Other | lineage4.8 | None | ERR4821198 | Other | lineage3 | gb | ERR4821232 | HR-TB | lineage4.8 | gb | ERR4822004 | Other | lineage1.1.1.1 | gb | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821325 | Other | lineage3 | None | ERR4821331 | HR-TB | lineage4.8 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4821341 | Other | lineage4.3.4.1 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | ERR4821526 | Other | lineage4.3.2 | None | ERR4821572 | Other | lineage2.1 | None | ERR4822171 | Other | lineage3 | gb | ERR4822176 | Other | lineage4.1.1.2 | None | ERR4821736 | HR-TB | lineage2.2.1 | gb | SRR6045614 | Other | lineage4.8 | None | ERR4821746 | Other | lineage4.4.1.1 | gb | ERR4821761 | Other | lineage3 | gb | ERR4821773 | Other | La1.6 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045743 | Other | lineage3 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6045899 | Other | lineage4.1.2.1 | gb | SRR6044983 | Other | lineage3.1.1 | None | SRR6044904 | Other | lineage3 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6045248 | Other | lineage3.1.1 | None | SRR6044978 | Sensitive | lineage4.1.1.3.1 | gb | SRR6045125 | Other | lineage1.1.2 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR6046064 | Other | lineage3 | gb | SRR6045424 | Other | lineage1.1.2 | None | SRR6046246 | Other | lineage3 | None | SRR6046275 | Other | lineage3.1.1 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR6046291 | Other | lineage3 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR4829359 | Other | lineage4.7 | None | ERR4830753 | RR-TB | lineage1.1.2 | ir | ERR4829835 | HR-TB | lineage4.8 | it | ERR4830479 | RR-TB | lineage1.2.2.1 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR6046848 | Other | lineage4.6.5 | None | SRR6046739 | Other | lineage1.1.2 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046818 | Other | lineage4.2.1 | gb | SRR6046815 | Other | lineage3 | None | SRR6981912 | Sensitive | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR6982070 | RR-TB | None | SRR6981962 | Sensitive | None | SRR6982471 | Sensitive | lineage2.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796595 | Other | lineage4.9 | None | ERR108424 | Sensitive | lineage4.8 | None | ERR3439433 | Other | La1.8.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR8975921 | Sensitive | lineage4.9 | None | ERR6197029 | Other | lineage4.7 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117681 | Other | lineage4.3.3 | None | ERR9117788 | Other | lineage3 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR9117823 | Other | lineage1.1.1 | None |
|---|
