Rv0667 - c.1326G>C
Drug resistance types
59 Sensitive
53 RR-TB
30 HR-TB
36 MDR-TB
4 Pre-XDR-TB
1 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 87 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.8 | 9 |
| lineage4.9.1 | 1 |
| lineage4 | 5 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage4.8.1 | 3 |
| lineage2.2.1 | 10 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage4.3.4 | 1 |
| lineage4.4.1.1.1 | 4 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.8.1 | 3 |
| lineage3.1.2.1 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage3 | 5 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.8.2 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage4.1.1.1 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage3.1.1 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage5.1.4 | 1 |
| lineage4.1.1.3.1 | 2 |
| M.canetti;lineage4.9;lineage9 | 1 |
| 2 | |
| La1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.3 | 4 |
| lineage4.4.1.1 | 5 |
| lineage4.4.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.2.1 | 3 |
| lineage2.2.1;lineage4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1;lineage4.9 | 2 |
| M.canetti;lineage1 | 1 |
| lineage4.3.1 | 1 |
| lineage1.1.1 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.3.2.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.1;lineage4.9 | 1 |
| M.canetti;lineage4.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage6.1.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.4 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.5 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 219 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675514 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR037504 | Other | lineage4.9.1 | None | ERR2446382 | Other | lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1180345 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR11462861 | Other | La1.8.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR6866241 | Other | lineage4.3.2 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR3675446 | RR-TB | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675586 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811030 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR2446566 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR4812155 | Other | lineage4.9 | None | ERR3468488 | Other | La1.8.1 | None | ERR4819546 | HR-TB | lineage3 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR1023509 | MDR-TB | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR4796577 | HR-TB | None | SRR12708416 | Sensitive | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR6045832 | Other | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR736831 | Other | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR3439432 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR3675390 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR176741 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4798823 | HR-TB | lineage4 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR4811031 | Other | lineage4.5 | None | ERR400326 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4818259 | RR-TB | lineage4.1.1.1 | None | SRR3675522 | Other | lineage4.9 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR4815079 | RR-TB | lineage3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR18572454 | RR-TB | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None |
|---|
