EBG00000313339 - n.1405A>T
Drug resistance types
54 Sensitive
12 RR-TB
23 HR-TB
20 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 71 |
| lineage4.8 | 5 |
| lineage2.2.1.1 | 6 |
| lineage6 | 1 |
| lineage4.4.1.1.1 | 2 |
| La1;lineage4.1.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.6.2.2 | 1 |
| La1.2.BCG | 2 |
| lineage2.2.1 | 18 |
| lineage4.1.2.1 | 3 |
| La1.7;lineage4.9;lineage6 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.8.1 | 3 |
| 1 | |
| La1.8.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.3 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.1.1.1 | 2 |
| lineage6.1.3 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1;lineage4.9 | 2 |
| lineage1.1.2 | 1 |
| La1.7 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 149 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341453 | Other | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR9787362 | Sensitive | lineage6 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1915485 | Other | La1.2.BCG | None | ERR323085 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | ERR1063896 | Sensitive | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | SRR1173568 | Sensitive | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR736848 | Other | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR161037 | Other | lineage4.9 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1915487 | Other | La1.2.BCG | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | SRR6981999 | Sensitive | lineage2.2.1 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR11466044 | Other | lineage4.1.1.3 | None | SRR5341303 | Sensitive | lineage4.9 | None |
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