EBG00000313339 - n.1405A>T
Drug resistance types
51 Sensitive
28 RR-TB
19 HR-TB
19 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
91 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 2 |
| lineage4.1.2.1 | 15 |
| 26 | |
| lineage3 | 8 |
| lineage4 | 42 |
| lineage4.9 | 18 |
| lineage1.1.2 | 4 |
| lineage2.2.1.2 | 1 |
| lineage1.1.3.1 | 3 |
| lineage4.3 | 1 |
| lineage6 | 1 |
| lineage4.8 | 9 |
| lineage2.2.1.1 | 8 |
| lineage6.1.3 | 1 |
| lineage2.2.1 | 31 |
| lineage4.8.1 | 1 |
| lineage4.2.2 | 2 |
| lineage2.2.2 | 1 |
| lineage1.2.2 | 1 |
| lineage4.7 | 3 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4 | 2 |
| lineage4.1.3 | 1 |
| lineage1.2.1.1 | 2 |
| lineage4.3.3 | 7 |
| lineage2.1 | 1 |
| lineage3.1.1 | 3 |
| lineage4.1.2 | 2 |
| lineage1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage3.1.3 | 2 |
| lineage4.4.1.1 | 2 |
| lineage4.3.4.2.1 | 3 |
| lineage4.1.1.3.1 | 2 |
| lineage4.8.2 | 1 |
| lineage4.4 | 1 |
| lineage4.3.1.1 | 3 |
| lineage4.1.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.5 | 1 |
| lineage5.1.1 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 221 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797073 | HR-TB | La1.8.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4024991 | Other | None | ERR400529 | Other | lineage3 | None | ERR4188247 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4797264 | Sensitive | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4798099 | Other | None | ERR6866022 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR6866410 | Sensitive | None | ERR736872 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736848 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR751326 | Sensitive | lineage4 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9787362 | Sensitive | lineage6 | None | ERR9117789 | Sensitive | lineage4.8 | None | ERR970441 | RR-TB | lineage2.2.1.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR1173777 | Other | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR14801749 | Sensitive | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | ERR4814312 | Other | lineage4 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4814362 | Other | lineage4.8 | None | ERR4814341 | Other | lineage4.7 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814554 | Other | lineage4.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675488 | HR-TB | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4814507 | Other | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR181744 | HR-TB | None | SRR3675230 | RR-TB | lineage3 | None | SRR3675222 | Other | None | SRR3675509 | Other | lineage4.9 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR4814911 | Other | lineage4.3.3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR212123 | Other | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4817060 | RR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816462 | Other | lineage4.1.2.1 | None | SRR3675571 | HR-TB | None | ERR4816464 | Other | lineage3 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4818691 | Other | lineage4.8 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4818810 | Other | lineage2.2.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2513223 | Other | lineage4.1.2.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818449 | Other | lineage4.3.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR2513681 | Other | lineage1.1.2 | None | SRR5341453 | Sensitive | None | SRR5341366 | Sensitive | lineage4 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4820742 | Other | lineage4.3.4.2.1 | None | ERR4820284 | Other | lineage4.9 | None | ERR4820318 | Other | lineage4.2.2 | None | SRR5341425 | Other | lineage4 | None | SRR5341387 | Other | lineage4 | None | ERR4820369 | Other | lineage2.2.1 | None | SRR5341298 | Sensitive | lineage4 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4820478 | Other | lineage3.1.3 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819842 | Other | lineage4.1.2.1 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4820833 | HR-TB | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | SRR5341308 | Sensitive | lineage4 | None | ERR2514962 | Other | lineage4.4 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820122 | Other | lineage4.3.1.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | ERR4820959 | Other | lineage4.1.2.1 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | ERR4821796 | Other | lineage4.1.1 | None | SRR6045519 | HR-TB | None | SRR6045516 | Other | lineage3.1.1 | None | SRR5341469 | Other | lineage4 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821417 | Other | lineage1.1.3.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821288 | Other | lineage4.7 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR6045158 | Other | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045892 | Sensitive | None | SRR6045071 | Other | lineage4.3.1.1 | None | ERR4830353 | Other | None | SRR6046397 | Other | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | SRR6046874 | Other | lineage4.5 | None | ERR4832054 | MDR-TB | lineage2.2.1.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6981999 | Sensitive | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR7535082 | Sensitive | lineage4 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | ERR323107 | Other | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR323066 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR323085 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR1063883 | Sensitive | lineage4 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR1063896 | Sensitive | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796629 | Other | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796597 | Other | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None |
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