EBG00000313339 - n.1405A>T


Drug resistance types
54 Sensitive 28 RR-TB 20 HR-TB 19 MDR-TB 13 Pre-XDR-TB 0 XDR-TB 108 Other
lineage Counts
lineage Count
lineage4 42
26
lineage1.1.3.1 3
lineage4.3 1
lineage2.2.1 32
lineage4.8 14
lineage2.2.1.1 8
lineage4.1.2.1 20
lineage6.1.3 1
lineage6 1
lineage4.8.1 1
lineage4.9 19
La1.8.1 2
lineage4.2.2 2
lineage2.2.2 1
lineage1.2.2 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.7 3
lineage4.1.3 1
lineage4.3.4 2
lineage4.1 1
lineage4.3.3 7
lineage1.2.1.1 2
lineage3 12
lineage2.1 1
lineage4.6.2.2 1
lineage3.1.1 3
lineage4.1.2 2
lineage4.3.2.1 1
lineage4.1.1 4
lineage1.1.2 5
lineage3.1.2.1 1
lineage1 1
lineage3.1.3 2
lineage4.4.1.1 2
lineage4.3.4.2.1 3
lineage4.1.1.3.1 2
lineage4.8.2 2
lineage4.5 2
lineage4.4 1
lineage4.3.1.1 3
lineage4.2.2.2 1
lineage5.1.1 1
lineage2.2.1.2 1
spoligotype Counts
spoligotype Count
None 242
Geographic prevalence
Country level data for this variant is available for 22 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR736834 Sensitive lineage4 None
ERR6866022 Other None
ERR6866410 Sensitive None
ERR6866547 Sensitive lineage4 None
ERR6866639 Other None
ERR736856 HR-TB lineage4 None
ERR736848 HR-TB None
ERR736872 Sensitive lineage4 None
ERR751326 Sensitive lineage4 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9117760 HR-TB lineage4.3 None
ERR970413 MDR-TB lineage2.2.1 None
ERR9117789 Sensitive lineage4.8 None
SRR10808399 Sensitive lineage4 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR970445 MDR-TB lineage2.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787256 Other lineage6.1.3 None
ERR9787362 Sensitive lineage6 None
SRR10808668 Sensitive lineage2.2.1 None
SRR10808490 Sensitive lineage2.2.1.1 None
SRR11349187 Pre-XDR-TB lineage4.8.1 None
SRR10809074 Sensitive lineage4 None
SRR10808805 Sensitive None
SRR1158918 Sensitive lineage4 None
SRR1183144 Other lineage2.2.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1173568 Other lineage4.9 None
SRR1173777 Other lineage4 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180172 Other lineage2.2.1 None
SRR1180996 HR-TB lineage4 None
SRR1181091 Other lineage2.2.1.1 None
SRR14801749 Sensitive None
SRR1184024 Other lineage2.2.1.1 None
SRR1183965 Sensitive lineage4.9 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18002908 Other lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
ERR4814362 Other lineage4.8 None
SRR19295647 Sensitive lineage4.9 None
ERR4815225 RR-TB lineage1.2.2 None
ERR4814312 Other lineage4 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR18213721 Other lineage4.8 None
SRR19303820 RR-TB lineage4.8 None
ERR4814341 Other lineage4.7 None
ERR4815780 MDR-TB lineage4.1.3 None
SRR3675488 HR-TB None
ERR161039 Sensitive lineage4.3.4 None
ERR4814507 Other lineage2.2.1 None
ERR4814554 Other lineage4.1 None
ERR4815452 Other lineage4.3.3 None
ERR4815784 Other lineage2.2.1 gb
ERR181744 HR-TB None
ERR4814734 Other lineage1.2.1.1 None
SRR3675222 Other None
SRR3675230 RR-TB lineage3 None
SAMEA3501073 RR-TB lineage4.8 None
SRR3675246 Sensitive lineage4 None
ERR4814789 Other lineage3 gb
ERR702405 Sensitive lineage2.1 None
ERR4814911 Other lineage4.3.3 None
ERR4816462 Other lineage4.1.2.1 None
SRR3675527 RR-TB lineage4.9 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR4816184 Other lineage4.1.2.1 None
ERR4817060 RR-TB None
ERR212123 Other None
SRR3675509 Other lineage4.9 None
ERR4816110 Sensitive lineage4.9 gb
SRR5341384 Sensitive lineage4.9 None
ERR4816464 Other lineage3 None
SRR3675571 HR-TB None
ERR4818050 Other lineage4.6.2.2 None
ERR4816549 Other lineage2.2.1 None
ERR4817398 Other lineage3.1.1 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4816692 Other lineage4.1.2.1 None
ERR4817294 Other lineage4.1.2 None
ERR2513392 Other lineage4.3.2.1 gb
ERR4819002 HR-TB lineage4.8 None
ERR4818724 Other lineage4.1.2.1 gb
ERR2513059 Other lineage4.1.1 gb
ERR2513082 Other lineage4.1.2.1 gb
ERR4816561 Sensitive lineage3 gb
ERR4816571 Other lineage1.1.2 None
ERR4817189 Other lineage4.7 None
ERR4816800 Other lineage4.8 gb
ERR4816856 Other lineage4.1.2.1 None
ERR4818691 Other lineage4.8 None
ERR4819011 Other lineage3.1.2.1 None
ERR4818126 RR-TB lineage1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4818810 Other lineage2.2.1 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4818128 RR-TB lineage4.1.2.1 None
ERR4818280 Other lineage4.1.2.1 gb
ERR2513223 Other lineage4.1.2.1 None
ERR4818449 Other lineage4.3.3 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR4818522 Pre-XDR-TB lineage3 None
SRR5007168 RR-TB lineage4.9 None
SRR5007165 MDR-TB lineage3 None
ERR2513298 Other lineage4.8 gb
SRR5007169 RR-TB lineage4.8.2 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR4817584 MDR-TB lineage3 None
SRR5341453 Sensitive None
ERR2513681 Other lineage1.1.2 None
SRR5341366 Sensitive lineage4 None
ERR4819198 Other lineage2.2.1 None
ERR4820720 Other lineage4.1.2.1 None
ERR2513949 Other lineage3 gb
SRR5341387 Other lineage4 None
ERR4820284 Other lineage4.9 None
ERR4820742 Other lineage4.3.4.2.1 None
SRR5341425 Other lineage4 None
ERR2514173 Other lineage4.5 gb
ERR4820318 Other lineage4.2.2 None
ERR4820736 Other lineage4.1.2.1 gb
ERR4820369 Other lineage2.2.1 None
ERR4820746 RR-TB lineage3 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR2514351 Sensitive lineage3 gb
SRR5341298 Sensitive lineage4 None
SRR5341455 Sensitive lineage4 None
ERR4819622 Other lineage4.1.2.1 None
ERR4820478 Other lineage3.1.3 None
SRR5341303 RR-TB lineage4 None
ERR2514673 Other lineage4.1.2.1 gb
SRR5341300 Other lineage4 None
SRR5341299 Sensitive lineage4 None
ERR4819842 Other lineage4.1.2.1 None
ERR4820833 HR-TB None
SRR5341308 Sensitive lineage4 None
ERR2514943 Other lineage4.8 gb
ERR2514962 Other lineage4.4 None
ERR4820019 Other lineage4.3.4.2.1 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR4820075 Other lineage4.1.2.1 None
ERR4820122 Other lineage4.3.1.1 None
ERR2515093 Other lineage4.8.2 gb
SRR5341467 Other lineage4 None
ERR4820151 RR-TB lineage4.8 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341461 Sensitive lineage4 None
ERR4820959 Other lineage4.1.2.1 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR4821796 Other lineage4.1.1 None
ERR4821119 Other lineage4.4.1.1 None
SRR5341469 Other lineage4 None
SRR6045537 Pre-XDR-TB lineage2.2.1 None
SRR6045516 Other lineage3.1.1 None
SRR6045519 HR-TB None
SRR6046117 RR-TB lineage4.9 None
ERR4821167 Other lineage4.8 gb
ERR4821417 Other lineage1.1.3.1 None
ERR4821288 Other lineage4.7 None
ERR4821679 Other lineage4.3.3 None
ERR4821563 HR-TB lineage1.1.2 gb
ERR4821655 Sensitive lineage4 None
ERR4822150 Other lineage4.8 gb
ERR4822261 RR-TB lineage2.2.1 None
SRR5818586 RR-TB lineage4.2.2.2 None
ERR4821704 MDR-TB lineage4.3.3 None
ERR2693227 Other lineage4.9 None
SRR6045071 Other lineage4.3.1.1 None
SRR6045892 Sensitive None
SRR6045749 Other lineage4.1.1 gb
SRR6045158 Other lineage4.9 None
ERR4830353 Other None
SRR6046397 Other None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046616 Other lineage4.3.1.1 None
ERR502510 Sensitive lineage4 None
SRR6511621 HR-TB None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR6046852 MDR-TB lineage3 None
SRR6046874 Other lineage4.5 None
ERR4832054 MDR-TB lineage2.2.1.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR6981999 Sensitive lineage2.2.1 None
SRR7535082 Sensitive lineage4 None
ERR502517 MDR-TB lineage5.1.1 None
SRR9613550 HR-TB lineage4.1.2.1 None
ERR323107 Other lineage4 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970979 Sensitive lineage4.8 None
ERR1063896 Sensitive None
ERR323066 Sensitive lineage4 None
ERR323085 Sensitive lineage4 None
ERR067699 HR-TB lineage4 None
ERR1035122 Sensitive None
ERR1063883 Sensitive lineage4 None
ERR10796565 RR-TB lineage4.9 None
ERR10796564 Other lineage4.3.3 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796571 Other lineage4.9 None
ERR10796576 RR-TB lineage4.9 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796598 RR-TB lineage4.9 None
ERR10796629 Other lineage4 None
ERR10796597 Other lineage4 None
ERR10796620 Other lineage4.1.1 None
ERR3273109 MDR-TB lineage4 None
ERR133825 Sensitive lineage4 None
ERR137286 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR3797073 HR-TB La1.8.1 None
ERR4188247 HR-TB None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4024991 Other None
ERR400529 Other lineage3 None
ERR4796254 Sensitive lineage4 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4796929 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4797184 Sensitive lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4797474 Other None
ERR4799378 Sensitive lineage4 None
ERR4798099 Other None
ERR4798139 Sensitive lineage1.1.2 None