lineage | Count |
---|---|
3 | |
lineage4.9 | 20 |
lineage4 | 1 |
lineage4.4.1.1 | 1 |
lineage4.8.2 | 1 |
lineage4.1.1.3.1 | 1 |
lineage3 | 1 |
lineage4.6.1.1 | 1 |
lineage2.2.1 | 7 |
lineage4.9;La1.3 | 1 |
lineage2.2.2 | 1 |
lineage4.6.5 | 2 |
lineage4.5;lineage2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 41 |
ID | Drug resistance | Lineage | Country iso2 | ERR4815310 | Other | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | ERR4816322 | Other | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR1023509 | Other | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR1735596 | RR-TB | lineage4.9 | None |
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