EBG00000313339 - n.872A>G
Drug resistance types
20 Sensitive
24 RR-TB
8 HR-TB
28 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
94 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.3 | 2 |
| lineage3.1.1 | 6 |
| lineage4.9 | 20 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage2.2.1 | 19 |
| lineage1.2.2.2 | 2 |
| lineage4.8 | 12 |
| lineage4.3.1.1 | 4 |
| lineage4 | 8 |
| lineage4.6.2.2 | 5 |
| lineage4.1.1 | 2 |
| lineage3 | 16 |
| lineage6 | 3 |
| lineage4.6.1.2 | 5 |
| lineage4.1.2 | 2 |
| lineage4.4.1.1 | 9 |
| lineage2.2.2 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.3.3 | 4 |
| lineage4.2.1 | 2 |
| lineage4.1.2.1 | 13 |
| lineage4.1.1.3 | 4 |
| lineage4.4.1.2 | 1 |
| 4 | |
| lineage1.1.3.1 | 2 |
| lineage1.2.1.1 | 2 |
| lineage3.1 | 1 |
| lineage1.1.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage4.3.4.1 | 4 |
| lineage4.8.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.1.2 | 2 |
| lineage1.1.3.3 | 1 |
| lineage3.1.2 | 1 |
| lineage3.1.2.2 | 2 |
| lineage1.1.1.1 | 2 |
| lineage4.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.6 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 183 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769453 | Other | La1.3 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769436 | Other | La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117806 | Other | lineage4.8 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6197036 | Other | lineage4 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9117725 | Other | lineage4.1.1 | None | ERR9117729 | Other | lineage3 | None | ERR9117763 | HR-TB | lineage3 | None | ERR9117788 | Other | lineage3 | None | ERR9787033 | Sensitive | lineage6 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR10315640 | MDR-TB | lineage4.8 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10315486 | MDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR15723193 | Sensitive | lineage2.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR1735591 | Other | lineage4.1.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002991 | Pre-XDR-TB | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18213726 | Other | lineage3 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR22048392 | Other | lineage4.8 | None | SRR18913750 | Other | lineage2.2.1 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR19303808 | Sensitive | lineage4.1.2.1 | None | SRR19304094 | Other | lineage6 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR4815419 | Other | lineage4.8 | None | ERR4814656 | Other | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814623 | Other | lineage4.8 | None | ERR4812763 | Other | lineage2.2.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR3675234 | Other | None | ERR4814930 | Other | lineage4.4.1.1 | None | ERR4815517 | Other | lineage1.2.2.2 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027285 | MDR-TB | lineage4.6.2.2 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR2229198 | MDR-TB | lineage4.8 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816746 | Sensitive | lineage4.8 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4817703 | Other | lineage1.1.1 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4819017 | RR-TB | lineage3 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4818190 | Other | lineage4.8 | None | ERR4818176 | Other | lineage4.1.2.1 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818285 | HR-TB | lineage4.1.2.1 | None | ERR4818440 | Other | lineage6.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2512832 | Other | lineage4.3.4.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4820290 | Other | lineage3 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4820829 | Other | lineage4.8 | None | ERR4819920 | MDR-TB | lineage3 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR2514708 | Sensitive | lineage4.1.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4820133 | Sensitive | lineage1.1.3.1 | None | ERR4821214 | RR-TB | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045743 | Other | lineage3 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6044904 | Other | lineage3 | None | ERR4821572 | Other | lineage2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6044936 | Other | lineage4 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046246 | Other | lineage3 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR6046291 | Other | lineage3 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6046729 | Other | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6046767 | RR-TB | lineage2.2.1 | None | SRR6046852 | MDR-TB | lineage3 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR7131071 | Sensitive | lineage4.1.2.1 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7131221 | Other | lineage4.6.2.2 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR8649119 | Other | lineage4.6 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR11466514 | Sensitive | lineage4.3.4.1 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796627 | Other | lineage4 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3806588 | Other | lineage6 | None |
|---|
