EBG00000313339 - n.894G>A
Drug resistance types
7 Sensitive
10 RR-TB
3 HR-TB
15 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
47 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2.1 | 3 |
| lineage4.9 | 7 |
| lineage4.6 | 1 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1 | 13 |
| lineage4.2.2.2 | 3 |
| lineage1.1.2 | 2 |
| lineage1.2.2.2 | 2 |
| lineage3 | 8 |
| lineage4.1.1.1 | 3 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.3.3 | 3 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.8 | 5 |
| lineage4.1.1.3.1 | 2 |
| lineage4.4.1.1 | 4 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.1.2 | 3 |
| lineage4.3.2 | 1 |
| lineage1.2.1.1 | 2 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.8.1 | 2 |
| lineage4.3.1.1 | 2 |
| lineage6.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage2.2.2 | 2 |
| lineage3.1.1 | 1 |
| lineage4.8.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 89 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR867544 | Other | lineage4.9 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR6044936 | Other | lineage4.6 | None | ERR11465590 | Sensitive | lineage4.1.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR15014615 | MDR-TB | lineage1.1.2 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR7070461 | Other | lineage3 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR10315579 | Other | lineage2.2.1.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | SRR7070293 | Other | lineage4.8 | None | SRR6046020 | Other | lineage3 | None | ERR10796595 | Other | lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR7069030 | Other | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796598 | Other | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | ERR10796577 | Other | lineage4.9 | None | ERR10796635 | Other | lineage4.8 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | ERR10796561 | Other | lineage4.3.2 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5007165 | Other | lineage3 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR9117788 | Other | lineage3 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | SRR6044904 | Other | lineage3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR3675527 | Other | lineage4.9 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR18002908 | Other | lineage2.2.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070223 | HR-TB | lineage3 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR7069518 | Other | lineage4.8 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR7070369 | Other | lineage1.2.2.2 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR7070479 | Other | lineage4.1.2 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1735598 | RR-TB | lineage4.9 | None |
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