EBG00000313339 - n.894G>A


Drug resistance types
17 Sensitive 23 RR-TB 4 HR-TB 19 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 93 Other
lineage Counts
lineage Count
lineage4.1.1.3.1 3
lineage3 21
lineage4.8.2 1
lineage4.9 18
lineage4.1.2.1 9
lineage4.4.1.1 7
lineage4.8 9
lineage4.3.4.2 1
lineage2.2.1.1 4
lineage4.3.1.1 4
lineage4.1.1.3 4
lineage4.6.2.2 4
lineage4.2.1 2
lineage3.1 2
lineage4 7
lineage3.1.1 5
lineage4.2.1.1 1
lineage2.2.1 18
lineage1.1.2 4
lineage4.7 2
lineage4.1.1 2
lineage1.1.3.3 1
lineage1.1.3.1 1
lineage4.2.2.2 3
lineage3.1.2 1
lineage3.1.2.2 2
lineage1.1.1.1 1
2
lineage4.6.5 1
lineage4.4.2 1
lineage4.3.2 1
lineage4.3 1
lineage4.3.3 3
lineage4.6 2
lineage4.3.4.1 1
lineage1.2.2.2 2
lineage4.3.2.1 1
lineage4.1.2 1
lineage4.4.1.1.1 1
lineage2.2.2 2
lineage6 1
lineage4.4.1.2 1
lineage1.2.1.1 2
spoligotype Counts
spoligotype Count
None 160
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007165 MDR-TB lineage3 None
SRR5007169 RR-TB lineage4.8.2 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007170 RR-TB lineage4.9 None
ERR4820777 Other lineage4.1.2.1 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR4819305 RR-TB lineage4.9 None
ERR3275239 Sensitive lineage4.8 nl
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4820746 RR-TB lineage3 None
SRR6045447 Other lineage3 gb
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4820862 Other lineage2.2.1.1 None
ERR4820968 Other lineage4.1.2.1 gb
SRR6045422 Other lineage4.3.1.1 None
SRR6045464 Other lineage4.1.1.3 None
SRR6045485 Other lineage4.9 None
SRR6045805 Other lineage4.3.1.1 None
SRR6045565 Other lineage4.6.2.2 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045664 Other lineage4.2.1 None
SRR6045705 Other lineage4.9 None
SRR6045743 Other lineage3 None
SRR6045778 Other lineage3.1 None
SRR6044784 MDR-TB lineage3 None
SRR5818663 Sensitive lineage4.1.2.1 dj
SRR6045944 Other lineage4.1.2.1 None
SRR6045909 Other lineage4.8 None
SRR6044904 Other lineage3 None
SRR6044958 Other lineage4.4.1.1 None
SRR6044936 Other lineage4 None
SRR6044945 HR-TB lineage4.1.2.1 gb
SRR6044983 Other lineage3.1.1 None
SRR6044993 Other lineage3 None
SRR6045052 HR-TB lineage4.2.1.1 None
SRR6045056 Other lineage2.2.1 gb
SRR6046020 Other lineage3 None
SRR6045125 Other lineage1.1.2 None
SRR6045295 Other lineage4.7 None
SRR6045243 Sensitive lineage4.1.1 gb
SRR6045267 RR-TB lineage4 None
SRR6046064 Other lineage3 gb
SRR6045312 Other lineage1.1.3.3 None
SRR6045321 Other lineage1.1.3.1 None
SRR6046246 Other lineage3 None
SRR6045424 Other lineage1.1.2 None
SRR6045843 Other lineage4.2.2.2 None
SRR6046359 Other lineage4.7 None
SRR6046275 Other lineage3.1.1 None
SRR6046273 Other lineage3.1.2 None
SRR6046291 Other lineage3 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046343 Other lineage2.2.1 None
SRR6046447 Sensitive lineage4.8 gb
SRR6046463 Other lineage4.4.1.1 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046616 Other lineage4.3.1.1 None
SRR6046612 Other lineage1.1.1.1 None
SRR6046679 Other lineage3 gb
SRR6046668 Sensitive lineage1.1.2 gb
SRR6046701 Other lineage3.1.2.2 None
SRR6046729 Other None
SRR6046818 Other lineage4.2.1 gb
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046766 Other lineage3.1.1 None
SRR6046905 Other lineage3 gb
SRR6046815 Other lineage3 None
SRR6046848 Other lineage4.6.5 None
SRR6046852 MDR-TB lineage3 None
SRR6397642 RR-TB None
SRR9971246 MDR-TB lineage4.1.1.3 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR7131004 Other lineage4.6.2.2 None
SRR7131221 Other lineage4.6.2.2 None
ERR10796558 Sensitive lineage4 None
SRR7131287 Other lineage2.2.1.1 None
SRR9971088 RR-TB lineage2.2.1 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
ERR10796555 Other lineage4.1.2.1 None
ERR10796561 Other lineage4.3.2 None
ERR10796582 HR-TB lineage4.3 None
ERR10796563 Other lineage4.3.3 None
ERR10796564 Other lineage4.3.3 None
ERR10796574 Other lineage4.9 None
ERR10796575 RR-TB lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796578 Other lineage2.2.1 None
ERR10796580 RR-TB lineage4.6 None
ERR10796595 Other lineage4.9 None
ERR10796583 Other lineage2.2.1 None
ERR10796586 Other lineage4.9 None
ERR10796599 Other lineage4 None
ERR10796598 RR-TB lineage4.9 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796615 Other lineage4 None
ERR10796620 Other lineage4.1.1 None
ERR10796635 Other lineage4 None
ERR10796627 Other lineage4 None
ERR6197024 RR-TB lineage4.9 None
ERR9117678 Other lineage4.6.2.2 None
ERR9117729 Other lineage3 None
ERR9117676 Other lineage4.2.2.2 None
ERR9117788 Other lineage3 None
ERR9117732 Other lineage1.2.2.2 None
ERR9117740 Other lineage3.1.1 None
ERR9117763 HR-TB lineage3 None
ERR9117812 Other lineage4.3.1.1 None
ERR9117806 Other lineage4.8 None
SRR10315556 Sensitive lineage2.2.1 None
ERR9117827 Other lineage1.2.2.2 None
SRR10315464 MDR-TB lineage4.4.1.1 None
ERR9285844 Sensitive lineage3.1.1 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR10315579 Other lineage2.2.1.1 None
SRR10315640 MDR-TB lineage4.8 None
SRR10315696 Sensitive lineage4.3.2.1 None
SRR10315693 RR-TB lineage4.1.2 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
SRR1181161 Other lineage4.9 None
SRR11342688 Other lineage4.2.2.2 None
SRR1180252 Other lineage4.9 None
SRR1183080 RR-TB lineage4.9 None
SRR1181250 Other lineage4.9 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR1735591 Other lineage4.1.2.1 None
SRR15014615 MDR-TB lineage1.1.2 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002908 Other lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003042 Other lineage2.2.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR18213726 Other lineage3 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18213736 MDR-TB lineage3 None
SRR19304094 Other lineage6 None
SRR18913750 Other lineage2.2.1 None
SRR19303808 Sensitive lineage4.1.2.1 None
SRR19303985 Other lineage4.8 None
SRR19304057 Sensitive lineage4.4.1.2 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR22048392 Other lineage4.8 None
SRR22048374 Sensitive lineage4.8 None
SRR3675230 RR-TB lineage3 None
SRR3675261 Other lineage1.2.1.1 None
ERR4814896 Other lineage2.2.1.1 None
SRR3675291 Sensitive lineage4.6 gb
ERR4818691 Other lineage4.8 None
SRR3675552 RR-TB lineage4.9 None
SRR3675527 RR-TB lineage4.9 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027290 RR-TB lineage3.1 None
ERR4817187 Sensitive lineage4.9 gb
ERR3276170 Other lineage4.1.2.1 nl