lineage | Count |
---|---|
lineage4.4.2 | 1 |
lineage4.2.1 | 1 |
La1.3 | 1 |
lineage4.9 | 10 |
lineage4.4.1.1.1 | 2 |
lineage4.8 | 13 |
La1.4 | 1 |
lineage3.1.2.1 | 2 |
lineage2.2.1;lineage4.9 | 1 |
lineage2.2.1 | 13 |
lineage4.8.1 | 1 |
lineage4.6.5 | 2 |
lineage2.2.1.1 | 1 |
lineage4.1.1.1 | 1 |
lineage2.2;lineage4.9 | 1 |
lineage4.5 | 1 |
lineage4.1.1.3 | 1 |
lineage2;lineage4 | 1 |
lineage2.2.2 | 2 |
lineage4.3.2.1 | 1 |
lineage4.3.3 | 1 |
lineage3 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.1.1.3.1;lineage4.9 | 1 |
lineage4.1.2.1 | 1 |
lineage4.2.2.2 | 1 |
lineage4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 64 |
ID | Drug resistance | Lineage | Country iso2 | SRR20969542 | Other | lineage4.4.2 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4769436 | Other | La1.3 | None | ERR1023509 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR978735 | Other | lineage4.8 | None | SRR16278274 | Other | La1.4 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR978694 | Other | lineage4.8 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR26139264 | Other | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR978756 | Other | lineage4.8 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4796351 | Sensitive | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR26139263 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | DRR473823 | Sensitive | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR978748 | Other | lineage4.8 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR4820586 | Other | lineage3 | gb | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR18572454 | RR-TB | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR10315567 | HR-TB | lineage2.2.1 | None |
---|