EBG00000313339 - n.791T>C
Drug resistance types
10 Sensitive
36 RR-TB
1 HR-TB
15 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
91 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 26 |
| lineage4.2.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.8 | 17 |
| lineage2.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1.2 | 4 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.1 | 1 |
| lineage3 | 13 |
| lineage4.9 | 13 |
| lineage4.3.4.2 | 3 |
| lineage4.1.2.1 | 15 |
| lineage1.2.1.1 | 1 |
| lineage3.1 | 1 |
| 2 | |
| lineage4.6.2.2 | 1 |
| lineage4.7 | 1 |
| lineage4.3.3 | 8 |
| lineage1 | 2 |
| lineage4.6 | 1 |
| lineage5.1.3 | 1 |
| lineage4.1.1.3.1 | 4 |
| lineage4.4.1.1 | 4 |
| lineage6 | 1 |
| lineage4.8.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.3.1 | 3 |
| lineage4 | 8 |
| lineage4.5 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage4.3.4.1 | 2 |
| lineage1.1.2 | 1 |
| lineage6.1.3 | 1 |
| lineage3.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.1.1 | 2 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.2.1 | 5 |
| lineage5.1.1 | 1 |
| lineage4.3.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 159 |
Geographic prevalence
Country level data for this variant is available for 22 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18002908 | Other | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4815118 | Other | lineage2.2 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR19303985 | Other | lineage4.8 | None | SRR19304109 | Other | lineage4.8 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4815261 | Other | lineage4.8 | gb | ERR4814362 | Other | lineage4.8 | None | ERR4814496 | RR-TB | lineage4.1.2 | None | ERR4815413 | Other | lineage4.3.4.2.1 | None | ERR4815784 | Other | lineage2.2.1 | gb | ERR4814709 | Other | lineage4.1.1 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR4815467 | Other | lineage3 | None | ERR4814821 | Other | lineage2.2.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814905 | Other | lineage4.8 | gb | SRR3675527 | RR-TB | lineage4.9 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR2027232 | Other | lineage4.3.4.2 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR4817060 | RR-TB | None | ERR4816334 | Other | lineage4.6.2.2 | None | ERR4816464 | Other | lineage3 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4818988 | Other | lineage1 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4817214 | Other | lineage4.8 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4817735 | Other | lineage4.8 | None | ERR4818384 | Other | lineage4.8 | None | ERR4817822 | Other | lineage4.6 | None | ERR2513401 | HR-TB | lineage3 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR2512532 | Other | lineage5.1.3 | gb | ERR4818208 | Other | lineage4.1.1.3.1 | gb | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2513223 | Other | lineage4.1.2.1 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4818013 | Other | lineage4.3.3 | gb | ERR4819017 | RR-TB | lineage3 | None | ERR4818126 | RR-TB | lineage1 | None | ERR2512494 | Other | lineage4.3.3 | gb | SRR4114385 | Sensitive | lineage4.3.4.2 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818574 | Other | lineage6 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4817555 | RR-TB | lineage3 | None | ERR2513657 | Other | lineage1.2.2.2 | gb | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR4820256 | Other | lineage2.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4819310 | Sensitive | lineage4.1.2.1 | gb | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819368 | Sensitive | lineage4.8 | gb | ERR4820324 | Other | lineage4 | None | ERR4820335 | Other | lineage4.1.2.1 | None | ERR4820369 | Other | lineage2.2.1 | None | ERR4819549 | Other | lineage3 | gb | ERR4819555 | Other | lineage4.8 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR2514173 | Other | lineage4.5 | gb | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR4819830 | Other | lineage2.2.1 | None | ERR2514896 | Other | lineage3 | gb | ERR2514943 | Other | lineage4.8 | gb | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4819980 | Other | lineage4.1.2.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR2514968 | Other | lineage4.3.3 | None | ERR2516136 | Pre-XDR-TB | lineage4.8 | es | ERR4820107 | RR-TB | None | ERR4821829 | Other | lineage1.1.2 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827690 | Sensitive | lineage3 | None | ERR4821409 | Other | lineage4.8 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR6046210 | Other | lineage4 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6046541 | Other | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | ERR2851354 | RR-TB | lineage4.9 | None | SRR6046281 | Other | lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6153166 | Other | lineage1.2.1.2.1 | ca | SRR6046852 | MDR-TB | lineage3 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR6832071 | Sensitive | lineage4.2.1 | None | SRR6832700 | Sensitive | lineage4.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796627 | Other | lineage4 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796634 | Other | lineage4 | None | ERR10796635 | Other | lineage4 | None | ERR11049937 | Sensitive | lineage4.2.1 | None | SRR16088442 | Sensitive | lineage4.2.1 | None | SRR14164581 | Sensitive | lineage4.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None |
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