EBG00000313325 - n.223T>G
Drug resistance types
11 Sensitive
47 RR-TB
7 HR-TB
20 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
118 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 21 |
| lineage4.1.1 | 4 |
| lineage3 | 25 |
| lineage6 | 2 |
| lineage3.1.2.1 | 2 |
| lineage1 | 2 |
| lineage4.4.1.1 | 6 |
| lineage4.3.2 | 3 |
| lineage4.1.1.3.1 | 2 |
| lineage4.8.2 | 2 |
| lineage4.9 | 28 |
| lineage4.8 | 16 |
| lineage1.1.2 | 4 |
| lineage4 | 12 |
| lineage1.2.1.2.1 | 1 |
| lineage4.5 | 1 |
| lineage3.1.1 | 2 |
| lineage4.1 | 3 |
| lineage1.1.3.1 | 2 |
| lineage4.3.4.1 | 4 |
| lineage3.1.2 | 2 |
| lineage4.8.1 | 1 |
| lineage4.7 | 3 |
| 8 | |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1 | 27 |
| lineage4.3.1.1 | 2 |
| lineage1.1.1.1 | 2 |
| lineage4.3.3 | 8 |
| lineage5 | 2 |
| lineage4.1.3 | 1 |
| lineage4.1.1.3 | 1 |
| La1.8.1 | 1 |
| lineage2.2.2 | 3 |
| lineage4.1.2 | 2 |
| lineage4.3.4 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.8;lineage4.3.3 | 2 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3.1.3 | 1 |
| lineage1.1.3 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 217 |
Geographic prevalence
Country level data for this variant is available for 29 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2513056 | HR-TB | lineage4.1.2.1 | gb | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818752 | Other | lineage3 | None | ERR4818763 | Other | lineage3 | gb | ERR4818787 | MDR-TB | lineage6 | None | ERR4817948 | Other | lineage3 | gb | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818766 | Other | lineage3 | gb | ERR4818126 | RR-TB | lineage1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818407 | Other | lineage4.3.2 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR4818538 | Other | lineage3 | gb | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR2513298 | Other | lineage4.8 | gb | ERR4817555 | RR-TB | lineage3 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR2513681 | Other | lineage1.1.2 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4820324 | Other | lineage4 | None | ERR4820334 | Other | lineage4.4.1.1 | gb | ERR4820328 | Other | lineage3 | gb | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR2514173 | Other | lineage4.5 | gb | ERR4820397 | Other | lineage4.9 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819765 | Other | lineage4.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR2514668 | Other | lineage4.8.1 | gb | ERR2514834 | Other | lineage4.7 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR2514756 | Other | lineage3 | gb | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820833 | HR-TB | None | ERR4820026 | Other | lineage3 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820907 | Other | lineage4.1.2.1 | gb | ERR4820161 | Other | lineage3 | None | ERR4821796 | Other | lineage4.1.1 | None | ERR4820922 | Other | lineage4.1.2.1 | gb | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821116 | Sensitive | lineage2.2.1 | gb | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821891 | Other | lineage4.8 | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821197 | Other | lineage1.1.1.1 | gb | ERR4821214 | RR-TB | None | ERR4821286 | Other | lineage4.8 | None | ERR4821958 | Other | lineage4.3.3 | gb | ERR4821310 | Other | lineage5 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4822004 | Other | lineage1.1.1.1 | gb | ERR4821331 | HR-TB | lineage4.8 | None | ERR4821341 | Other | lineage4.3.4.1 | None | ERR4821409 | Other | lineage4.8 | None | ERR4822129 | Other | lineage4.9 | None | ERR4822093 | Sensitive | lineage4.1.1 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821526 | Other | lineage4.3.2 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821761 | Other | lineage3 | gb | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6044936 | Other | lineage4 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6045267 | RR-TB | lineage4 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR5087846 | Other | La1.8.1 | None | ERR3275190 | Other | lineage3 | nl | SRR7496471 | Sensitive | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR10796572 | Other | lineage4.3.4.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR7496523 | Other | lineage4.7 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | DRR184932 | Other | lineage2.2.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796627 | Other | lineage4 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796634 | Other | lineage4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR10796635 | Other | lineage4 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR9117788 | Other | lineage3 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9787033 | Sensitive | lineage6 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1140736 | RR-TB | None | SRR1173311 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR20632814 | Sensitive | lineage4 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814362 | Other | lineage4.8 | None | ERR4815407 | Other | lineage1.1.2 | gb | ERR4814874 | MDR-TB | lineage1.1.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815467 | Other | lineage3 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815898 | Other | lineage3 | None | ERR4815909 | Other | lineage4.8 | None | ERR4815919 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4815994 | Other | lineage3 | gb | ERR2027220 | Other | lineage3.1.3 | None | ERR4817060 | RR-TB | None | ERR4816093 | Other | lineage1.1.3 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4816493 | Other | lineage4.1.2.1 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR2446509 | Other | lineage3 | nl | ERR4817131 | Pre-XDR-TB | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816549 | Other | lineage2.2.1 | None | ERR4817426 | Other | lineage4.1 | gb | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4817175 | Other | lineage4.8 | None | ERR4816756 | RR-TB | None | ERR4817526 | Other | lineage4.4.1.1 | gb | ERR4816818 | Other | lineage4.8.2 | None | ERR4817276 | Other | lineage2.2.1 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4818988 | Other | lineage1 | None |
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