Rv1630 - c.240T>C
Drug resistance types
40 Sensitive
27 RR-TB
12 HR-TB
24 MDR-TB
12 Pre-XDR-TB
1 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 2 |
| lineage2.2.1 | 15 |
| lineage4.8 | 6 |
| lineage4 | 12 |
| lineage4.9 | 51 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| 11 | |
| lineage4.1.2.1 | 4 |
| lineage3 | 6 |
| lineage4.4.1.1 | 1 |
| lineage3.1 | 1 |
| lineage2.1 | 1 |
| lineage4.6.1.2 | 4 |
| lineage4;lineage3 | 1 |
| lineage4.8.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.3.3 | 2 |
| La1.7.X-unk4 | 1 |
| lineage4.4.1.2 | 1 |
| La1.8.1 | 3 |
| lineage4.9;La1.3 | 2 |
| La1.3 | 4 |
| lineage2.2.2 | 2 |
| lineage3.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.3.2.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 150 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18909918 | Other | lineage2.2.1.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815310 | Other | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4815550 | Other | lineage4 | None | SRR3675230 | RR-TB | lineage3 | None | ERR1750916 | Other | lineage2.2.1.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675456 | HR-TB | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR3675555 | HR-TB | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816470 | Other | lineage3 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2229233 | Sensitive | lineage4 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2513259 | Other | lineage3 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR5007168 | RR-TB | lineage4.9 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5341432 | HR-TB | lineage4 | None | ERR4820324 | Other | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819910 | Other | lineage4.9 | None | SRR5341313 | HR-TB | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4820107 | RR-TB | None | ERR4821286 | Other | lineage4.8 | None | SRR5341315 | Sensitive | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6046743 | Other | lineage3 | None | SRR6046644 | HR-TB | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6982246 | Sensitive | lineage4 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR1034652 | Other | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4796577 | MDR-TB | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR9117714 | Other | lineage3.1.2 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1175473 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181368 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR1792022 | Other | La1.8.1 | None |
|---|
