Rv1630 - c.240T>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
42 Sensitive
15 RR-TB
12 HR-TB
28 MDR-TB
5 Pre-XDR-TB
2 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 4 |
| lineage4.3.4.1 | 1 |
| lineage4.9 | 35 |
| lineage2.2.1;lineage4.9 | 3 |
| 1 | |
| lineage4.1.2.1 | 2 |
| lineage4.8 | 7 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1 | 14 |
| lineage2.2;lineage4.9 | 1 |
| lineage3 | 2 |
| lineage4 | 2 |
| lineage4.6.1.2 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.1.1.1 | 2 |
| lineage3.1.1 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.7 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.8.1 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage2;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.4.1.2 | 1 |
| lineage2.2.2 | 3 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.9.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 119 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12708419 | Other | lineage4.3.3 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR7496471 | Sensitive | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | ERR4769493 | Other | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR2513259 | Other | lineage3 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180148 | Sensitive | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR1181349 | Sensitive | lineage4 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None |
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