Rv0668 - c.1362G>C
Drug resistance types
10 Sensitive
38 RR-TB
13 HR-TB
13 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.2.2 | 1 |
| lineage6 | 2 |
| lineage4.1.2.1 | 8 |
| lineage4.1.1 | 1 |
| lineage3 | 10 |
| lineage1 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.3.2 | 2 |
| lineage4.1.1.3.1 | 3 |
| lineage4.9 | 21 |
| lineage4.3.3 | 1 |
| lineage4 | 8 |
| lineage1.2.1.2.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.8 | 7 |
| lineage4.1.2 | 3 |
| 10 | |
| lineage5 | 2 |
| lineage4.7 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.1 | 1 |
| lineage2.2.2 | 3 |
| lineage2.2.1 | 14 |
| lineage5.1.1 | 1 |
| lineage4.9;La1.3 | 2 |
| lineage2.2 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.9;lineage2.2.1 | 1 |
| La2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 123 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR2515055 | Other | lineage3 | None | ERR4818126 | RR-TB | lineage1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818407 | Other | lineage4.3.2 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR2509886 | RR-TB | lineage3 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4820324 | Other | lineage4 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR2514655 | Sensitive | lineage3 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819655 | Other | lineage4.8 | None | ERR4820827 | Other | lineage4.1.2 | None | ERR2515032 | Other | lineage3 | None | ERR4820833 | HR-TB | None | SRR5341330 | HR-TB | None | ERR4821310 | Other | lineage5 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR6046096 | Other | lineage4.1.2.1 | None | ERR4821214 | RR-TB | None | ERR4821288 | Other | lineage4.7 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6046133 | HR-TB | None | SRR6045909 | Other | lineage4.8 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045267 | RR-TB | lineage4 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6045384 | Other | lineage4.1.2 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | SRR6046594 | HR-TB | lineage4 | None | ERR4829208 | RR-TB | lineage4.8 | None | ERR4829333 | RR-TB | lineage4 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR6046729 | Other | None | DRR185024 | Other | lineage2.2.2 | None | DRR184629 | Other | lineage2.2.1 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796630 | HR-TB | None | ERR3797036 | HR-TB | None | ERR751345 | Other | lineage5.1.1 | None | ERR400350 | Sensitive | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR1013527 | RR-TB | lineage2.2 | None | ERR9787336 | Other | lineage6 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR18572456 | Sensitive | lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18572454 | RR-TB | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR4815301 | Other | lineage4.4.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4814312 | Other | lineage4 | None | ERR4815777 | Other | lineage4.9 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4815694 | Sensitive | lineage4.9 | None | ERR4814623 | Other | lineage4.8 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4814841 | Other | lineage4.1 | None | ERR4814767 | MDR-TB | lineage2.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4816466 | HR-TB | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816397 | Other | lineage1.1.2 | None | ERR4815923 | Sensitive | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4817131 | Pre-XDR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4815815 | Sensitive | lineage4 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR2512986 | Other | lineage3 | None | ERR4817826 | RR-TB | lineage4.5 | None |
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