Rv0668 - c.1362G>C
Drug resistance types
7 Sensitive
21 RR-TB
7 HR-TB
18 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.2.2 | 1 |
| lineage4.1.1.1 | 2 |
| lineage5 | 2 |
| lineage3 | 2 |
| lineage4.8 | 7 |
| lineage4.9 | 18 |
| lineage4.3.3 | 3 |
| lineage2.2.1 | 10 |
| lineage4.2.1 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.8.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage3.1.2.1 | 1 |
| lineage3.1.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.3.1 | 1 |
| lineage4.7 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.2.2 | 3 |
| lineage6.1.3 | 1 |
| lineage5.1.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.4.2.1 | 2 |
| La2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage1.1.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 80 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4821310 | Other | lineage5 | None | ERR867567 | RR-TB | lineage3 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR5341330 | Other | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR4829333 | Other | lineage4 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR6046594 | Sensitive | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR6046485 | Other | lineage4.9 | None | SRR18572454 | RR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18572456 | Sensitive | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4829208 | Other | lineage4.8 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4816967 | Other | lineage5 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4821288 | Other | lineage4.7 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | SRR5007204 | Other | lineage4.1.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | ERR4769493 | Other | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | DRR185024 | Other | lineage2.2.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4769554 | RR-TB | lineage4.9 | None |
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