Rv1630 - c.846C>T
Drug resistance types
39 Sensitive
35 RR-TB
67 HR-TB
22 MDR-TB
15 Pre-XDR-TB
0 XDR-TB
55 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 42 |
| 39 | |
| lineage4 | 42 |
| lineage4.3.1 | 1 |
| lineage4.8 | 4 |
| lineage4.5 | 1 |
| lineage4.4.1.1 | 2 |
| La1.8.1 | 5 |
| lineage4.7 | 1 |
| lineage4.4.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2.1 | 18 |
| lineage2.2.2 | 2 |
| lineage2.2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage3 | 17 |
| lineage4.1.2.1 | 7 |
| lineage4;lineage3.1 | 1 |
| La1.3 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage1.1.2 | 2 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage1.1.1.1 | 2 |
| lineage6 | 1 |
| lineage4.3.4.2 | 3 |
| lineage4.3.4.2.1 | 6 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.8;lineage4.3.3 | 1 |
| La1.6 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.3.3 | 2 |
| lineage4.2.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage3.1.3 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage2.1 | 1 |
| lineage3.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage1.1.1 | 1 |
| lineage3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 233 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045320 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | ERR4828628 | MDR-TB | lineage4.5 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR7496471 | Sensitive | None | SRR6046737 | Other | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR323107 | Other | lineage4 | None | SRR7496523 | Other | lineage4.7 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323045 | HR-TB | None | DRR184629 | Other | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR1063858 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063857 | HR-TB | None | ERR067712 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063855 | Other | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283028 | Other | None | ERR3283025 | HR-TB | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3283047 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797063 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR473332 | Other | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4769551 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358979 | Other | None | ERR6358951 | HR-TB | lineage4 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR9119669 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736839 | Other | None | ERR736848 | HR-TB | None | ERR9787336 | Other | lineage6 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049672 | Other | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR10808805 | Sensitive | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1140736 | RR-TB | None | SRR1173170 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR8692905 | HR-TB | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692893 | Other | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | ERR176779 | HR-TB | None | ERR176778 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR1750908 | Sensitive | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | ERR4814841 | Other | lineage4.1 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR181887 | HR-TB | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR176651 | HR-TB | None | ERR4814976 | Other | lineage4.9 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4815954 | Sensitive | lineage1.1.1.1 | gb | SRR3675531 | Sensitive | lineage4.1.2 | None | SRR3675552 | RR-TB | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675509 | Other | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4816852 | Other | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2512986 | Other | lineage3 | None | ERR2515055 | Other | lineage3 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4819051 | Other | lineage4 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR2512606 | MDR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR5341315 | Sensitive | None | SRR5341313 | HR-TB | None | SRR6045519 | HR-TB | None | ERR4820030 | Other | lineage4.9 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR5818685 | Sensitive | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044936 | Other | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6045045 | Other | lineage2.2.1 | None |
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