EBG00000313339 - n.1226T>C
Drug resistance types
6 Sensitive
13 RR-TB
9 HR-TB
29 MDR-TB
17 Pre-XDR-TB
0 XDR-TB
108 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 15 |
| lineage2.2.1 | 43 |
| lineage4.1.1.3 | 7 |
| lineage4.3.4.2.1 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.9 | 26 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.2.2.2 | 4 |
| lineage4.7 | 2 |
| lineage4.2.1 | 2 |
| lineage4.1.2.1 | 16 |
| lineage4.3 | 1 |
| lineage4.4.1.1 | 5 |
| lineage3 | 8 |
| lineage2.2.2 | 6 |
| lineage5.1.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage3.1.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.8.1 | 2 |
| lineage6.2.3 | 1 |
| lineage4.3.4.1 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.3.4.2 | 3 |
| lineage6.3.1 | 1 |
| lineage4.3.3 | 4 |
| lineage4.4.2 | 2 |
| lineage4 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.6.5 | 1 |
| lineage4.2.2 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage3.1.1;lineage4 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.3.2 | 2 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 182 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7131196 | Other | lineage4.8 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | SRR3675582 | Other | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR4820829 | Other | lineage4.8 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR6045928 | Other | lineage4.9 | None | ERR10796593 | Other | lineage4.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | ERR4820075 | Other | lineage4.1.2.1 | None | SRR7070154 | Other | lineage4.4.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR2515032 | Other | lineage3 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303899 | Other | lineage3 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SRR7070134 | Other | lineage3.1.1 | None | ERR4815517 | Other | lineage1.2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR19303907 | Other | lineage4.8 | None | SRR6045909 | Other | lineage4.8.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR10796630 | Other | lineage6.2.3 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR405191 | Sensitive | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR3675265 | Other | lineage4 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796640 | Other | lineage4.1.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | ERR4829208 | Other | lineage4.8 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SRR7069946 | Other | lineage4.8 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR7070293 | Other | lineage4.8 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR19304104 | Other | lineage4.8 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR7070329 | Other | lineage3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR10796617 | Other | lineage4.3.4.1 | None | SRR3675509 | Other | lineage4.9 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR9117788 | Other | lineage3 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR4819641 | Other | lineage4.6.2.2 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR3283043 | Other | lineage4.9 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR10796553 | Other | lineage4.9 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR4818128 | Other | lineage4.1.2.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6046442 | Other | lineage3 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | ERR10796635 | Other | lineage4.8 | None | SRR11342646 | HR-TB | lineage3 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002956 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | ERR10796599 | Other | lineage4.8 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR405190 | Sensitive | lineage4.9 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR7069347 | Other | lineage4.1.2.1 | None | ERR773806 | Sensitive | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR7070461 | Other | lineage3 | None | SRR7068873 | Other | lineage4.8 | None | SRR6046117 | Other | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SRR6046497 | Sensitive | lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | SRR3675389 | Other | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR11342689 | Other | lineage4.1.2.1 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR10796596 | Other | lineage4.9 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4819622 | Other | lineage4.1.2.1 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR10796568 | Other | lineage4.9 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002980 | Other | lineage2.2.1 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR3283051 | Other | lineage4.9 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR10796577 | Other | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | ERR3283008 | Other | lineage4.9 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR4034391 | MDR-TB | lineage4.1.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR10796592 | Other | lineage4.9 | None | SRR6045986 | Other | lineage3 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796591 | Other | lineage4.9 | None | ERR10796560 | Other | lineage4.9 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR11342669 | Other | lineage4.8 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6046210 | Other | lineage4.9 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR10796634 | Other | lineage4.7 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR10796559 | Other | lineage4.9 | None | SRR22048474 | RR-TB | lineage4.8 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR10796581 | Other | lineage4.1.2 | None |
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