EBG00000313339 - n.1226T>C


Drug resistance types
6 Sensitive 13 RR-TB 9 HR-TB 29 MDR-TB 17 Pre-XDR-TB 0 XDR-TB 108 Other
lineage Counts
lineage Count
lineage2.2.1 43
lineage4.1.1.3.1 2
lineage2.2.1.1 2
lineage6.2.3 1
lineage4.6.2.2 3
lineage4.4.2 2
lineage4.8 15
lineage4.1.2.1 16
lineage4.2.2.2 4
lineage4.9 26
lineage4.2.1 2
lineage4.1.1.3 7
lineage4.1.3 1
lineage4.1.1.1 2
lineage5.1.1 1
lineage4.4.1.1 5
lineage2.2.2 6
lineage4.5 1
lineage3 8
lineage3.1.1;lineage4.9 1
lineage4.3.3;lineage4.9 1
lineage4.3.3 4
lineage4.3.4.1 2
lineage3.1.1 1
lineage4.3.4.2 3
lineage4.3.2 2
lineage4.8.1 2
lineage4.3.4.2.1 1
lineage3.1.2.1;lineage4.9 1
lineage1.2.2.2 2
lineage6.3.1 1
lineage4.7 2
lineage2.2.1;lineage2.2.2 1
lineage4.1;lineage4.9 1
lineage4.4.1.1.1 1
lineage1.2.1.1 1
lineage4 1
lineage4.1.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.2.2 1
lineage4.3.4.1;lineage4.9 1
lineage4.6.5 1
lineage4.3 1
lineage3.1.1;lineage4 1
spoligotype Counts
spoligotype Count
None 182
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR867522 Pre-XDR-TB lineage2.2.1 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR11349207 RR-TB lineage2.2.1 None
SAMN02360579 HR-TB lineage2.2.1.1 None
ERR10796630 Other lineage6.2.3 None
SRR18003015 MDR-TB lineage2.2.1 None
ERR773806 Sensitive lineage2.2.1 None
ERR4815121 HR-TB lineage4.6.2.2 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
SRR7131123 Other lineage4.8 None
SRR7131229 Other lineage4.1.2.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR3283043 Other lineage4.9 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR6045603 Other lineage4.1.1.3 None
SRR11342671 RR-TB lineage4.1.3 None
SRR7070535 HR-TB lineage4.1.2.1 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR10796568 Other lineage4.9 None
ERR10796559 Other lineage4.9 None
SRR18002874 MDR-TB lineage2.2.1 None
ERR10796592 Other lineage4.9 None
ERR751330 MDR-TB lineage5.1.1 None
SRR11342684 HR-TB lineage4.4.1.1 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SRR18003007 MDR-TB lineage4.5 None
SRR7070329 Other lineage3 None
ERR4820829 Other lineage4.8 None
ERR171142 Other lineage3.1.1;lineage4.9 None
ERR10796615 Other lineage4.3.3;lineage4.9 None
SRR11342640 MDR-TB lineage4.3.3 None
ERR867540 MDR-TB lineage2.2.1 None
SRR3675509 Other lineage4.9 None
SRR7131145 Other lineage4.1.2.1 None
ERR10796589 Other lineage4.9 None
SRR18003024 RR-TB lineage2.2.1 None
SRR11349201 MDR-TB lineage4.1.1.3 None
ERR4820075 Other lineage4.1.2.1 None
SRR3675389 Other lineage4.9 None
SRR7131195 Other lineage2.2.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR18003045 Other lineage2.2.1 None
ERR2515032 Other lineage3 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
SRR19303899 Other lineage3 None
SRR6046442 Other lineage3 None
ERR10796562 Other lineage4.3.4.1 None
SRR7069922 Other lineage2.2.1 None
SRR7069347 Other lineage4.1.2.1 None
SRR7070134 Other lineage3.1.1 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR405191 Sensitive lineage4.9 None
ERR10796561 Other lineage4.3.2 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
ERR4819641 Other lineage4.6.2.2 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR18002974 Other lineage2.2.1 None
SRR7131147 Other lineage4.1.2.1 None
ERR10796628 Other lineage4.3.3 None
ERR10796626 Other lineage4.1.2.1 None
SRR6046117 Other lineage4.9 None
SRR6045464 Other lineage4.1.1.3 None
ERR4829208 Other lineage4.8 None
SRR21727760 Other lineage2.2.1 None
SRR6046497 Sensitive lineage4.9 None
SRR22048474 RR-TB lineage4.8 None
ERR2027257 Other lineage4.1.2.1 None
SRR7131196 Other lineage4.8 None
SRR6045909 Other lineage4.8.1 None
SRR18002976 Other lineage2.2.1 None
SRR5818647 Other lineage4.3.4.2.1 None
SRR18002963 Other lineage2.2.1 None
ERR10796640 Other lineage4.1.2.1 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR18002956 Other lineage2.2.1 None
ERR10796555 Other lineage4.1.2.1 None
ERR4819242 HR-TB lineage4.6.2.2 None
SRR3675582 Other lineage4.9 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SRR18002997 Other lineage2.2.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR6046484 Other lineage1.2.2.2 None
SRR11342688 Other lineage4.2.2.2 None
SRR6044841 Other lineage4.9 None
SRR5007204 Other lineage4.1.2.1 None
ERR4818440 Other lineage6.3.1 None
SRR6046359 Other lineage4.7 None
ERR867541 MDR-TB lineage4.2.1 None
ERR10796617 Other lineage4.3.4.1 None
ERR9117788 Other lineage3 None
SRR7131121 Other lineage4.3.3 None
SRR18002967 HR-TB lineage2.2.1 None
ERR10796560 Other lineage4.9 None
ERR10796577 Other lineage4.9 None
ERR2600422 MDR-TB lineage2.2.1 None
SRR6045986 Other lineage3 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
ERR4830549 MDR-TB lineage4.1.1.3 None
SRR6045928 Other lineage4.9 None
SRR7131216 Other lineage4.1.2.1 None
SRR18002876 MDR-TB lineage2.2.1;lineage2.2.2 None
ERR3283008 Other lineage4.9 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR11342689 Other lineage4.1.2.1 None
ERR10796629 Other lineage4.1;lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18002964 Other lineage2.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR405190 Sensitive lineage4.9 None
ERR10796635 Other lineage4.8 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR7131236 Other lineage4.3.4.2 None
SRR3675265 Other lineage4 None
SRR11342669 Other lineage4.8 None
ERR10796599 Other lineage4.8 None
SRR7068873 Other lineage4.8 None
ERR10796581 Other lineage4.1.2 None
ERR10219876 Other lineage4.3.4.2 None
ERR751317 Sensitive lineage4.9 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SRR19303817 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
ERR10796620 Other lineage4.1.1.1 None
ERR10796634 Other lineage4.7 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR10796571 Other lineage4.9 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002937 Other lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR7070293 Other lineage4.8 None
SRR19304104 Other lineage4.8 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003009 MDR-TB lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR7069835 Other lineage2.2.1 None
ERR10796591 Other lineage4.9 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
SRR18002981 Other lineage2.2.1 None
ERR867570 RR-TB lineage4.9 None
ERR10796594 Other lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
ERR10796596 Other lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR4034391 MDR-TB lineage4.1.2.1 None
SRR12062542 Pre-XDR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SAMN02360580 HR-TB lineage2.2.1 None
ERR9117805 Other lineage4.3.2 None
SRR11342646 HR-TB lineage3 None
ERR405217 Sensitive lineage2.2.1 None
ERR4819622 Other lineage4.1.2.1 None
SRR11342648 MDR-TB lineage4.1.1.3 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR19303907 Other lineage4.8 None
SRR11349203 MDR-TB lineage4.4.1.1 None
SRR6046848 Other lineage4.6.5 None
SRR7069946 Other lineage4.8 None
ERR3283051 Other lineage4.9 None
SRR11342685 HR-TB lineage4.4.1.1 None
ERR867538 Other lineage4.2.2.2 None
SRR19303820 RR-TB lineage4.8 None
SRR18003023 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR7070154 Other lineage4.4.1.1 None
ERR4815517 Other lineage1.2.2.2 None
ERR10796553 Other lineage4.9 None
SRR18002980 Other lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
ERR4818128 Other lineage4.1.2.1 None
SRR7070461 Other lineage3 None
ERR10796593 Other lineage4.3 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR6045621 Other lineage4.1.1.3 None
SRR6046275 Other lineage3.1.1;lineage4 None