Rv0668 - c.1275G>C
Drug resistance types
26 Sensitive
31 RR-TB
65 HR-TB
27 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
72 Other
lineage Counts
| lineage | Count |
|---|---|
| 34 | |
| lineage4 | 19 |
| lineage4.2.1 | 1 |
| lineage4.9 | 61 |
| lineage4.6.1.1 | 4 |
| lineage4.4.1.2 | 1 |
| lineage1.2.1.2.1 | 2 |
| La1.8.1 | 3 |
| La1.3 | 1 |
| lineage4.9;La1.3 | 1 |
| La1 | 1 |
| lineage3 | 15 |
| lineage2.2.1 | 24 |
| lineage2.2 | 1 |
| lineage4.1.2.1 | 11 |
| lineage4.3.4 | 1 |
| lineage4.6.5 | 2 |
| lineage5.1.1 | 2 |
| lineage4.3.4.2.1 | 4 |
| lineage6.1.3 | 1 |
| lineage3.1.1 | 2 |
| lineage6 | 1 |
| lineage4.8 | 7 |
| lineage2.2.2 | 2 |
| lineage4.3.2.1 | 1 |
| La2 | 1 |
| lineage1.1.1 | 1 |
| La1.4 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.4.2 | 1 |
| La1.7.1 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.1.1.3 | 5 |
| lineage4.5 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4;lineage3 | 1 |
| lineage4.8.2 | 1 |
| lineage4.3.3 | 2 |
| lineage1.1.3.1 | 2 |
| lineage4.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 232 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1063859 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3439265 | Other | lineage4.9 | None | ERR400443 | Sensitive | lineage1.2.1.2.1 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3468561 | HR-TB | lineage4.9 | None | ERR3797043 | HR-TB | None | ERR400350 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769423 | Other | La1.3 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4798262 | HR-TB | La1 | None | ERR4797141 | Sensitive | lineage3 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796577 | MDR-TB | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR736875 | HR-TB | lineage4 | None | ERR751345 | Other | lineage5.1.1 | None | ERR9119669 | HR-TB | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR8975534 | Sensitive | lineage4.3.4.2.1 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787336 | Other | lineage6 | None | ERR9891961 | HR-TB | lineage4.8 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1173281 | RR-TB | lineage3 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173740 | Other | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR13837805 | Sensitive | lineage4.9 | None | SRR13861153 | Other | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861399 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861376 | Other | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR17658565 | Other | lineage3 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19304064 | MDR-TB | lineage2.2.1 | None | SRR19303788 | Sensitive | lineage4.8 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR19303813 | HR-TB | lineage4.8 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR21469201 | Other | La1.7.1 | None | ERR176779 | HR-TB | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | SRR3675486 | HR-TB | None | SRR6325445 | HR-TB | None | ERR4815310 | Other | None | ERR4812763 | Other | lineage2.2.1 | None | ERR1750907 | RR-TB | None | ERR4815556 | RR-TB | lineage3 | None | ERR4815550 | Other | lineage4 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR192070 | Other | None | ERR3275220 | Other | lineage3 | nl | ERR212138 | HR-TB | lineage4 | None | ERR4816322 | Other | lineage4.9 | None | ERR4817069 | RR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4817832 | Sensitive | lineage1.2.1.2.1 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816852 | Other | lineage4.9 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR2446144 | Other | lineage3 | nl | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR2513682 | Sensitive | lineage3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4820394 | Other | lineage4.3.4.2.1 | None | SRR5341456 | Other | None | ERR4819357 | Other | lineage4.9 | None | ERR4820324 | Other | lineage4 | None | ERR4819462 | Other | lineage4 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR1035138 | MDR-TB | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR1023509 | Other | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4819910 | Other | lineage4.9 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | ERR2693237 | Other | lineage4.9 | None | ERR4819933 | Other | lineage4.9 | None | ERR2515032 | Other | lineage3 | None | ERR4821796 | Other | lineage4.1.1 | None | ERR2517528 | Other | lineage3 | nl | SRR6046210 | Other | lineage4 | None | ERR4821057 | HR-TB | lineage4 | None | ERR278594 | HR-TB | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6325442 | HR-TB | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6325448 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046737 | Other | lineage4.9 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6046815 | Other | lineage3 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7535086 | Other | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR323108 | HR-TB | lineage4 | None | ERR037504 | Other | lineage4.9.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR5311077 | RR-TB | La1.8.1 | None | ERR323045 | HR-TB | None | ERR037234 | Sensitive | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None |
|---|
