lineage | Count |
---|---|
lineage4.9 | 10 |
lineage4.4.1.1 | 1 |
lineage4.8.1 | 2 |
lineage4.8 | 6 |
lineage2.2.1 | 11 |
lineage4.2.2.2 | 1 |
lineage4.4 | 1 |
lineage4.6.1.2 | 2 |
lineage4.3.2.1 | 1 |
lineage4.2.1 | 3 |
lineage4.4.1.1.1 | 2 |
lineage2.2.2 | 2 |
lineage3 | 1 |
lineage4.1.2 | 1 |
lineage4.1.1.1 | 2 |
lineage2;lineage4 | 1 |
lineage4.3.3 | 3 |
lineage4.1.2.1 | 1 |
lineage2.2;lineage4 | 1 |
lineage4.1.1.3 | 2 |
spoligotype | Count |
---|---|
None | 54 |
ID | Drug resistance | Lineage | Country iso2 | ERR3283006 | RR-TB | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR6832271 | Sensitive | lineage4.8 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR16627752 | RR-TB | lineage4.4 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR1023509 | Other | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4821276 | Sensitive | lineage3 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None |
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