lineage | Count |
---|---|
lineage2.2.1 | 10 |
lineage2.2.2 | 1 |
lineage4.1.2.1;lineage4.4.1 | 1 |
lineage4.8.1 | 2 |
lineage4.1.2 | 2 |
lineage3.1.2.1 | 1 |
lineage4.9 | 7 |
lineage3 | 1 |
lineage4.1.1.3.1;lineage4.9 | 1 |
lineage4.3.3 | 2 |
lineage4.2.1 | 2 |
lineage4.8 | 6 |
lineage4.4.1.1 | 2 |
lineage4.6.1.1 | 1 |
lineage4.9.1 | 1 |
lineage4.1.3 | 1 |
lineage4.3.4.2 | 1 |
lineage4.1.2.1 | 1 |
lineage4.2.2.2 | 1 |
lineage4.1.1.1 | 2 |
lineage4.4 | 1 |
lineage4.4.1.1.1 | 2 |
lineage4.4.1.2 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 51 |
ID | Drug resistance | Lineage | Country iso2 | SRR26112601 | Sensitive | lineage2.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR037504 | Other | lineage4.9.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR20969366 | Sensitive | lineage2.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None |
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