EBG00000313339 - n.694G>T
Drug resistance types
18 Sensitive
45 RR-TB
22 HR-TB
50 MDR-TB
25 Pre-XDR-TB
0 XDR-TB
108 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2 | 1 |
| lineage4.9 | 56 |
| lineage2.2.1.1 | 3 |
| lineage4.3.3 | 10 |
| lineage4.8 | 27 |
| lineage4.4.1.1 | 2 |
| lineage4.1.3 | 1 |
| lineage2.2.1 | 66 |
| lineage4.4 | 1 |
| lineage4 | 3 |
| lineage4.2.2 | 1 |
| La2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage3 | 9 |
| lineage4.1.1.3 | 3 |
| lineage4.3.1.1 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.2.1 | 7 |
| La1.3 | 4 |
| lineage4.1.2.1 | 8 |
| La1.8.1 | 2 |
| lineage4.4.1.1.1 | 3 |
| lineage4.2.2.2 | 2 |
| lineage4.4.2 | 4 |
| lineage4.1.2 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage2.2.2 | 4 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage4.1.1.1 | 4 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.6.1.2 | 2 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.8.1 | 3 |
| lineage3.1.3 | 1 |
| lineage3.1.1 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.9.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.7 | 2 |
| lineage4.1.1.3.1 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage6.1.3 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.8.2 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.6.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 268 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6866241 | Other | lineage4.3.2 | None | SRR6045832 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR867575 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4798823 | HR-TB | lineage4 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR19304104 | Other | lineage4.8 | None | SRR13888750 | Other | La2 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR10796591 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7070329 | Other | lineage3 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342646 | HR-TB | lineage3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR9117788 | Other | lineage3 | None | ERR4769552 | Sensitive | La1.3 | None | SRR18912069 | Other | lineage4.1.2.1 | None | ERR2228910 | Other | lineage4.8 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR3468488 | Other | La1.8.1 | None | SRR3675509 | Other | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR10808730 | Other | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023509 | MDR-TB | lineage4.9 | None | ERR4817915 | Other | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR1238558 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR6045359 | HR-TB | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR978755 | RR-TB | lineage4.8 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR7755657 | Other | lineage4.8 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR9786076 | Other | lineage3 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR6046117 | Other | lineage4.9 | None | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | ERR867574 | Other | lineage4.9 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR1063855 | Other | lineage4.9 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR978727 | Other | lineage4.8 | None | SRR6982141 | Other | lineage4.3.3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR5311077 | Other | La1.8.1 | None | ERR2027220 | Sensitive | lineage3.1.3 | None | ERR867544 | Other | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR4821704 | Other | lineage4.3.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR2228900 | Other | lineage4.8 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR10796589 | Other | lineage4.9 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR10796598 | Other | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | ERR4769555 | Sensitive | La1.3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR867571 | Other | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | ERR867569 | Other | lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR1181256 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | SRR11342669 | Other | lineage4.8 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675552 | Other | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR867573 | Other | lineage4.9 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR4769514 | Other | La1.3 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645928 | Other | lineage4.7 | None | SRR3675582 | Other | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR3675389 | Other | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR978750 | RR-TB | lineage4.8 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR18002908 | Other | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR4820586 | Other | lineage3 | gb | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR19303899 | Other | lineage3 | None | ERR4769442 | Sensitive | lineage4.9 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR7070144 | Other | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4819166 | Other | lineage3 | gb | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR7070320 | Other | lineage4.8 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR4769408 | Other | La1.3 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None |
|---|
