| lineage | Count |
|---|---|
| La1.6 | 2 |
| lineage4.1.2 | 1 |
| lineage4.8 | 17 |
| lineage4.9 | 24 |
| lineage3 | 6 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.8.1 | 2 |
| lineage4.1.2.1 | 3 |
| La1.3;lineage4.4.1 | 2 |
| lineage2.2.1 | 13 |
| lineage2.2;lineage4 | 1 |
| lineage4.6.1.2 | 3 |
| lineage4.2.1 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4.4.1.1.1 | 2 |
| La2 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage3.1.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.6.5 | 2 |
| lineage5.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.3.2.1 | 2 |
| La1.3 | 1 |
| lineage4.3.3 | 2 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| spoligotype | Count |
|---|---|
| None | 105 |
| ID | Drug resistance | Lineage | Country iso2 | SRR10993951 | RR-TB | La1.6 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | ERR978735 | Other | lineage4.8 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | SRR1173281 | Other | lineage3 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR6480596 | HR-TB | La1.3;lineage4.4.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR978756 | Other | lineage4.8 | None | ERR978752 | Other | lineage4.8 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR978748 | Other | lineage4.8 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821811 | Sensitive | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4821773 | Other | La1.6 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR13888750 | Other | La2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1181256 | Other | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1140716 | Other | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR1049672 | Other | lineage3 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR4820030 | Other | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1196545 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR8686160 | Sensitive | lineage2.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1181403 | Other | lineage4.9 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | ERR4815079 | RR-TB | lineage3 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR10808749 | HR-TB | La1.3;lineage4.4.1 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None |
|---|