lineage | Count |
---|---|
lineage4.1.1.3 | 1 |
lineage4.9 | 24 |
lineage4.8 | 18 |
lineage4.1.2.1;lineage4.9 | 1 |
lineage2.2.1 | 13 |
lineage4.3.4.2.1 | 4 |
lineage4.2.1 | 2 |
lineage2.2.2 | 1 |
lineage5.1.1 | 1 |
lineage4.1.1.1 | 2 |
lineage2.2;lineage4 | 1 |
La1.3;lineage4.4.1 | 2 |
La1.3 | 1 |
lineage4.1.2.1 | 3 |
lineage4.4.1.1.1 | 2 |
lineage3 | 6 |
La1.6 | 2 |
lineage4.3.3 | 3 |
lineage4.6.5 | 2 |
lineage4.1.2 | 1 |
lineage4.6.1.2 | 3 |
La2 | 1 |
lineage4.2.2.2 | 2 |
lineage4.1.1.3.1 | 2 |
La1.7.X-unk4 | 1 |
lineage4.3.2.1 | 2 |
lineage4.1.2.1;lineage4.4.1.1 | 1 |
lineage4.8.1 | 2 |
lineage4.1.2.1;lineage4.4.1 | 1 |
lineage2.2.1;lineage4.5 | 1 |
lineage3.1.1 | 1 |
spoligotype | Count |
---|---|
None | 107 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR11342647 | MDR-TB | lineage4.1.1.3 | None |
ERR3797065 | RR-TB | lineage4.9 | None |
ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None |
ERR978735 | Other | lineage4.8 | None |
SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None |
ERR502470 | RR-TB | lineage4.9 | None |
SRR9971112 | Other | lineage2.2.1 | None |
SAMEA3501052 | RR-TB | lineage4.8 | None |
ERR978757 | RR-TB | lineage4.8 | None |
SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None |
SRR1181256 | Other | lineage4.9 | None |
SRR16156804 | Sensitive | lineage4.9 | None |
ERR323044 | HR-TB | lineage4.3.4.2.1 | None |
SRR14782539 | MDR-TB | lineage4.2.1 | None |
ERR4822261 | RR-TB | lineage2.2.1 | None |
ERR978765 | RR-TB | lineage4.8 | None |
SRR10315558 | Sensitive | lineage2.2.1 | None |
ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1735596 | RR-TB | lineage4.9 | None |
ERR751345 | Other | lineage5.1.1 | None |
ERR9119733 | MDR-TB | lineage2.2.1 | None |
SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None |
SAMEA3501073 | RR-TB | lineage4.8 | None |
SRR11342642 | MDR-TB | lineage4.1.1.1 | None |
SRR16156832 | RR-TB | lineage2.2;lineage4 | None |
ERR108125 | RR-TB | lineage4.9 | None |
ERR4769508 | RR-TB | lineage4.9 | None |
SRR11342651 | MDR-TB | lineage4.1.1.1 | None |
ERR978748 | Other | lineage4.8 | None |
ERR502479 | RR-TB | lineage4.9 | None |
SRR10315567 | HR-TB | lineage2.2.1 | None |
SRR10808749 | HR-TB | La1.3;lineage4.4.1 | None |
ERR4769436 | Other | La1.3 | None |
ERR4821272 | RR-TB | lineage4.1.2.1 | None |
SRR1196545 | Sensitive | lineage4.9 | None |
ERR5987263 | MDR-TB | lineage2.2.1 | None |
ERR978767 | RR-TB | lineage4.8 | None |
SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None |
SRR1062871 | RR-TB | lineage4.3.4.2.1 | None |
ERR3283006 | RR-TB | lineage4.9 | None |
SRR1173281 | Other | lineage3 | None |
ERR4769530 | RR-TB | lineage4.9 | None |
SRR1140736 | Other | lineage4.1.2.1 | None |
ERR4808964 | RR-TB | lineage2.2.1 | None |
ERR4818646 | Sensitive | lineage4.1.2.1 | None |
SRR10993951 | RR-TB | La1.6 | None |
SRR1181403 | Other | lineage4.9 | None |
SRR1049673 | Pre-XDR-TB | lineage3 | None |
SRR11342649 | MDR-TB | lineage4.3.3 | None |
ERR978756 | Other | lineage4.8 | None |
ERR7801176 | RR-TB | lineage4.6.5 | None |
SRR1049672 | Other | lineage3 | None |
SRR11342682 | Other | lineage4.1.2 | None |
SAMEA3501065 | RR-TB | lineage4.8 | None |
ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None |
SRR1062880 | MDR-TB | lineage4.6.1.2 | None |
SRR13888750 | Other | La2 | None |
ERR4821811 | Sensitive | lineage4.9 | None |
SAMN02380990 | MDR-TB | lineage4.6.1.2 | None |
ERR502473 | RR-TB | lineage4.9 | None |
SRR11342636 | MDR-TB | lineage4.3.3 | None |
SRR5818586 | RR-TB | lineage4.2.2.2 | None |
ERR4820030 | Other | lineage4.9 | None |
ERR8686160 | Sensitive | lineage2.2.1 | None |
SRR5007193 | RR-TB | lineage4.1.1.3.1 | None |
ERR2517627 | Sensitive | lineage4.8 | nl |
ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None |
SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None |
ERR3797062 | RR-TB | lineage4.9 | None |
ERR3445487 | Other | La1.7.X-unk4 | None |
SRR1180446 | Other | lineage4.9 | None |
SRR9971113 | Other | lineage2.2.1 | None |
ERR4819383 | RR-TB | lineage4.9 | None |
ERR4821773 | Other | La1.6 | None |
SRR9971168 | Other | lineage4.3.2.1 | None |
SRR1062918 | Other | lineage3 | None |
SAMEA3501067 | RR-TB | lineage4.8 | None |
SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None |
SRR11342693 | MDR-TB | lineage4.8.1 | None |
SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None |
SRR6480596 | HR-TB | La1.3;lineage4.4.1 | None |
SRR1140716 | Other | lineage3 | None |
SRR1173170 | Other | lineage4.9 | None |
SRR11342662 | MDR-TB | lineage4.8.1 | None |
SRR1140712 | MDR-TB | lineage4.6.1.2 | None |
ERR4815079 | RR-TB | lineage3 | None |
ERR4816610 | Other | lineage4.3.3 | None |
ERR502481 | RR-TB | lineage4.9 | None |
ERR502474 | RR-TB | lineage4.9 | None |
SRR5007167 | RR-TB | lineage4.1.1.3.1 | None |
ERR7801175 | HR-TB | lineage4.6.5 | None |
ERR4821172 | RR-TB | lineage4.9 | None |
SRR11342687 | RR-TB | lineage4.2.2.2 | None |
ERR978752 | Other | lineage4.8 | None |
SRR10869071 | MDR-TB | lineage2.2.1 | None |
ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None |
SRR11342660 | MDR-TB | lineage2.2.1 | None |
SRR16156188 | Sensitive | lineage4.9 | None |
ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None |
ERR502478 | RR-TB | lineage4.9 | None |
SRR9970981 | RR-TB | lineage4.3.2.1 | None |
ERR867541 | MDR-TB | lineage4.2.1 | None |
ERR4813263 | MDR-TB | lineage4.8 | None |
ERR978766 | RR-TB | lineage4.8 | None |
SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None |
ERR4820410 | RR-TB | lineage3.1.1 | None |
SRR16156697 | RR-TB | lineage2.2.1 | None |