EBG00000313339 - n.2867C>T
Drug resistance types
106 Sensitive
51 RR-TB
56 HR-TB
69 MDR-TB
30 Pre-XDR-TB
2 XDR-TB
454 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 4 |
| lineage3 | 58 |
| lineage4.1.2.1 | 51 |
| 13 | |
| lineage4.8 | 56 |
| La3 | 1 |
| lineage4.1.1 | 11 |
| lineage4.9 | 90 |
| lineage4.3.1.1 | 2 |
| lineage4.1.1.3 | 7 |
| lineage6.1.3 | 1 |
| lineage4.5 | 4 |
| lineage4.6.2.2 | 9 |
| lineage4.2.1 | 15 |
| lineage3.1.1 | 6 |
| lineage4.3.2.1 | 2 |
| lineage1.1.3 | 3 |
| lineage4.3.4.1 | 6 |
| lineage5 | 1 |
| lineage1.1.3.1 | 3 |
| lineage4.1.1.2 | 1 |
| lineage3.1.2.2 | 4 |
| lineage1.1.2 | 8 |
| lineage2.2.1 | 193 |
| lineage4.3.3 | 26 |
| lineage4.1.3 | 1 |
| lineage3.1.3 | 5 |
| lineage3.1.2 | 2 |
| lineage3.1 | 4 |
| lineage4.2.2.2 | 3 |
| lineage4 | 26 |
| lineage1.2.2.2 | 5 |
| lineage4.4 | 3 |
| lineage4.1.1.3.1 | 1 |
| lineage4.4.1.1 | 12 |
| lineage4.7 | 7 |
| lineage4.1.2 | 10 |
| lineage1.2.1.2.1 | 3 |
| lineage4.6.5 | 2 |
| lineage4.2.1.1 | 4 |
| lineage1.1.1 | 3 |
| lineage4.3.2 | 6 |
| lineage4.3 | 3 |
| lineage4.3.4.2 | 9 |
| lineage6.3.1 | 3 |
| lineage1.2.1.2 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage4.8;lineage4.2.1 | 1 |
| lineage2.2.2 | 5 |
| La1.8.1 | 3 |
| lineage4.8.1 | 4 |
| lineage1.1.1.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.9;La1.8 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage6.1.1 | 3 |
| La1.3 | 10 |
| lineage4.9;La1.3 | 3 |
| lineage4.6 | 1 |
| lineage6 | 3 |
| lineage4.6.3 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 3 |
| lineage2 | 2 |
| lineage4.4.2 | 6 |
| La2 | 2 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.2.2 | 1 |
| lineage1.2.2 | 1 |
| lineage4.1 | 3 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.2.2.1 | 3 |
| lineage4.6.2 | 1 |
| lineage4;lineage2 | 1 |
| lineage1 | 1 |
| lineage3.1.2.1 | 3 |
| lineage4.6.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 768 |
Geographic prevalence
Country level data for this variant is available for 78 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR8380862 | MDR-TB | lineage2.2.1.1 | in | ERR2515077 | Sensitive | lineage3 | gb | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820107 | RR-TB | None | ERR4820666 | Other | lineage4.8 | gb | ERR4820151 | RR-TB | lineage4.8 | None | ERR2515230 | Sensitive | lineage4.8 | None | ERR4820194 | Other | La3 | None | ERR4820188 | Other | lineage3 | gb | ERR4820907 | Other | lineage4.1.2.1 | gb | SRR6045455 | Sensitive | lineage4.1.1 | gb | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4820967 | HR-TB | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR5818445 | Other | None | ERR4821791 | HR-TB | lineage4.1.2.1 | None | ERR4821054 | Other | lineage3 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR4821198 | Other | lineage3 | gb | SRR6045496 | Other | lineage6.1.3 | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821167 | Other | lineage4.8 | gb | ERR4821887 | Other | lineage4.1.2.1 | None | ERR4821849 | Other | lineage4.5 | gb | SRR6045480 | Other | lineage4.1.1 | None | ERR4821127 | HR-TB | lineage4.6.2.2 | gb | ERR4821136 | Other | lineage4.2.1 | gb | SRR6045516 | Other | lineage3.1.1 | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821264 | Other | lineage1.1.3 | None | ERR4821341 | Other | lineage4.3.4.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821310 | Other | lineage5 | None | ERR4821331 | HR-TB | lineage4.8 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4822169 | Other | lineage4.1.1.3 | gb | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4822176 | Other | lineage4.1.1.2 | None | ERR4822222 | Other | lineage3.1.2.2 | None | ERR4821563 | HR-TB | lineage1.1.2 | gb | ERR4822190 | Other | lineage1.1.3.1 | gb | ERR4822225 | Sensitive | lineage3 | gb | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4822280 | Other | lineage4.1.3 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821719 | Other | lineage3 | gb | ERR4821712 | HR-TB | None | ERR4821761 | Other | lineage3 | gb | SRR6045613 | Other | lineage3.1.3 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045614 | Other | lineage4.8 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR5818388 | Other | lineage4.9 | None | SRR6045778 | Other | lineage3.1 | None | SRR5818572 | Sensitive | lineage4.2.2.2 | None | SRR6045743 | Other | lineage3 | None | SRR6046210 | Other | lineage4 | None | SRR5818653 | Sensitive | dj | SRR6044769 | Other | lineage1.1.2 | None | SRR5818690 | Other | lineage4.2.2.2 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR6044787 | Other | lineage4.4 | None | SRR6044774 | Other | lineage3 | None | SRR6044817 | Other | lineage3 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6044936 | Other | lineage4 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6045986 | Other | lineage3 | None | SRR6046020 | Other | lineage3 | None | SRR6046189 | Other | lineage4.8 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045248 | Other | lineage3.1.1 | None | SRR6046208 | Other | lineage4 | None | SRR6045295 | Other | lineage4.7 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045399 | Other | None | SRR6045384 | Other | lineage4.1.2 | None | SRR1735629 | Other | lineage1.2.2.2 | gb | ERR2851354 | RR-TB | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR2851359 | Other | lineage4.9 | None | ERR4829328 | Other | lineage2.2.1 | None | ERR4829337 | Other | lineage4.8 | None | SRR6046517 | Other | lineage4.8 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046482 | HR-TB | None | SRR6152910 | Sensitive | lineage1.2.1.2.1 | None | SRR6046607 | Other | lineage3 | None | SRR6046641 | Other | lineage4.8 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6046679 | Other | lineage3 | gb | SRR6046729 | Other | None | SRR6046802 | Other | lineage4 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046905 | Other | lineage3 | gb | SRR6397640 | Other | lineage4.2.1.1 | None | ERR2984791 | MDR-TB | lineage4.4.1.1 | None | ERR4831741 | MDR-TB | lineage1.1.1 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None | SRR6896247 | Sensitive | lineage4.1.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6832659 | Other | lineage4.2.1 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR6824572 | MDR-TB | lineage2.2.1 | None | SRR6153170 | Other | lineage4.9 | ca | SRR6257067 | HR-TB | lineage4.2.1 | None | ERR4832029 | HR-TB | lineage2.2.1 | vn | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR6807688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7131068 | Other | lineage4.8 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR7131004 | Other | lineage4.6.2.2 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR7131075 | Other | lineage4.8 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131161 | Other | lineage4.8 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131221 | Other | lineage4.6.2.2 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7131237 | Other | lineage2.2.1 | None | SRR7131234 | Other | lineage4.9 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR7131294 | Other | lineage6.3.1 | None | SRR7131257 | Other | lineage6.3.1 | None | SRR7131297 | Other | lineage1.2.1.2 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR847801 | Pre-XDR-TB | lineage4.3.3 | None | SRR7645808 | HR-TB | lineage4.8;lineage4.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR9971029 | MDR-TB | lineage2.2.2 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7516395 | MDR-TB | lineage2.2.1 | None | SRR8358501 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR9971200 | MDR-TB | lineage4.3.2 | None | DRR213597 | MDR-TB | lineage2.2.2 | None | SRR9971223 | Other | lineage2.2.1 | None | DRR099689 | Sensitive | lineage1.1.1.1 | None | ERR117683 | MDR-TB | lineage3.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR067712 | HR-TB | lineage4 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10796556 | Other | lineage4.3.4.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796581 | HR-TB | lineage4.1.2 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796588 | Other | lineage4 | None | ERR10796590 | Other | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796599 | Other | lineage4 | None | ERR10796615 | Other | lineage4 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR10796627 | Other | lineage4 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796629 | Other | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796634 | Other | lineage4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796635 | Other | lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3439279 | Other | lineage4.9;La1.8 | None | ERR3439301 | Other | lineage4.9;La1.8.1 | None | ERR3283043 | Other | lineage4.9 | None | ERR3797071 | Other | lineage4.9 | None | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR400350 | Sensitive | lineage4.9 | None | ERR4188158 | Other | lineage4.9 | None | ERR4192550 | Other | lineage6.1.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769404 | Other | La1.3 | None | ERR4769408 | Other | La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769543 | Sensitive | lineage4.9 | None | ERR4769548 | Other | lineage4.9 | None | ERR4769551 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4192392 | Other | lineage6.1.1 | None | ERR4192413 | Other | lineage6.1.1 | None | ERR4457908 | Sensitive | lineage4.1.2.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769406 | Other | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769453 | Other | La1.3 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769517 | Other | La1.3 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769546 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR5908213 | Sensitive | lineage4.3.3 | None | ERR6197022 | Other | lineage4.9 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR5987249 | MDR-TB | lineage4.3.2 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR9117780 | Other | lineage4.1.2.1 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736816 | Other | lineage4.9 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR9117759 | Other | lineage3 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR9117806 | Other | lineage4.8 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9787336 | Other | lineage6 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR9907785 | RR-TB | lineage4.3.2.1 | None | ERR9907760 | Pre-XDR-TB | lineage4.3 | None | ERR987695 | HR-TB | lineage4.3.4.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1002691 | HR-TB | lineage4.2.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR1175513 | Other | lineage4.9 | None | SRR1062932 | Pre-XDR-TB | lineage3 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR11342679 | Other | lineage4.6.3 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11342690 | Sensitive | lineage4.1.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR11349208 | MDR-TB | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172213 | Sensitive | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1166110 | Other | lineage2.2.1 | None | SRR1169017 | Other | lineage2.2.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR13180208 | XDR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR11972450 | MDR-TB | lineage2.2.1 | None | SRR12199485 | Other | lineage2 | None | SRR13180204 | Sensitive | lineage3 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR13888750 | Other | La2 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR14164796 | Sensitive | lineage4.1.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14782653 | Other | lineage4.2.1.1 | None | SRR15276982 | Pre-XDR-TB | lineage3 | None | SRR15315871 | Sensitive | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16156751 | RR-TB | lineage4.9 | None | SRR16295735 | Sensitive | lineage2.2.1 | None | SRR16295743 | Other | lineage2.2.1 | None | SRR16295737 | Other | lineage2.2.1 | None | SRR16295745 | Other | lineage2.2.1 | None | SRR16295740 | Other | lineage2.2.1 | None | SRR16295742 | Other | lineage2.2.1 | None | SRR16295741 | Other | lineage2.2.1 | None | SRR16295747 | Other | lineage2.2.1 | None | SRR16295749 | Other | lineage2.2.1 | None | SRR16295746 | Other | lineage2.2.1 | None | SRR16295751 | Other | lineage2.2.1 | None | SRR16295744 | Other | lineage2.2.1 | None | SRR16295748 | Other | lineage2.2.1 | None | SRR16295753 | Other | lineage2.2.1 | None | SRR16295750 | Other | lineage2.2.1 | None | SRR16295754 | Other | lineage2.2.1 | None | SRR16295752 | Other | lineage2.2.1 | None | SRR16295755 | Other | lineage2.2.1 | None | SRR16295759 | Sensitive | lineage2.2.1 | None | SRR16295758 | Other | lineage2.2.1 | None | SRR16295731 | Sensitive | lineage2.2.1 | None | SRR16295756 | Other | lineage2.2.1 | None | SRR16295757 | Other | lineage2.2.1 | None | SRR16295761 | Other | lineage2.2.1 | None | SRR16295763 | Other | lineage2.2.1 | None | SRR16295760 | Other | lineage2.2.1 | None | SRR16295762 | Other | lineage2.2.1 | None | SRR16295764 | Other | lineage2.2.1 | None | SRR16295771 | Other | lineage2.2.1 | None | SRR16295766 | Other | lineage2.2.1 | None | SRR16295765 | Other | lineage2.2.1 | None | SRR16295767 | Other | lineage2.2.1 | None | SRR16295769 | Other | lineage2.2.1 | None | SRR16295738 | Other | lineage2.2.1 | None | SRR16295773 | Other | lineage2.2.1 | None | SRR16295770 | Other | lineage2.2.1 | None | SRR16295768 | Other | lineage2.2.1 | None | SRR16295777 | Other | lineage2.2.1 | None | SRR16295772 | Other | lineage2.2.1 | None | SRR16295779 | Other | lineage2.2.1 | None | SRR16295775 | Other | lineage2.2.1 | None | SRR16295739 | Other | lineage2.2.1 | None | SRR16295782 | Other | lineage2.2.1 | None | SRR16295736 | Sensitive | lineage2.2.1 | None | SRR16295786 | Other | lineage2.2.1 | None | SRR16295785 | Other | lineage2.2.1 | None | SRR16295734 | Other | lineage2.2.1 | None | SRR16295732 | Other | lineage2.2.1 | None | SRR16295783 | Other | lineage2.2.1 | None | SRR16295790 | Other | lineage2.2.1 | None | SRR16295788 | Other | lineage2.2.1 | None | SRR16295776 | Other | lineage2.2.1 | None | SRR16295774 | Other | lineage2.2.1 | None | SRR16295791 | Other | lineage2.2.1 | None | SRR16295797 | Other | lineage2.2.1 | None | SRR16295799 | Other | lineage2.2.1 | None | SRR16295789 | Other | lineage2.2.1 | None | SRR16295780 | Other | lineage2.2.1 | None | SRR16295784 | Other | lineage2.2.1 | None | SRR16295801 | Other | lineage2.2.1 | None | SRR16295792 | Other | lineage2.2.1 | None | SRR16295804 | Other | lineage2.2.1 | None | SRR16295781 | Other | lineage2.2.1 | None | SRR16295798 | Other | lineage2.2.1 | None | SRR16295793 | Other | lineage2.2.1 | None | SRR16295787 | Other | lineage2.2.1 | None | SRR16295795 | Sensitive | lineage2.2.1 | None | SRR16295807 | Other | lineage2.2.1 | None | SRR16295800 | Sensitive | lineage2.2.1 | None | SRR16295794 | Other | lineage2.2.1 | None | SRR16295809 | Other | lineage2.2.1 | None | SRR16295808 | Other | lineage2.2.1 | None | SRR16295796 | Sensitive | lineage2.2.1 | None | SRR16295803 | Sensitive | lineage2.2.1 | None | SRR16295816 | Other | lineage2.2.1 | None | SRR16295805 | Other | lineage2.2.1 | None | SRR16295806 | Other | lineage2.2.1 | None | SRR16295817 | Other | lineage2.2.1 | None | SRR16295810 | Other | lineage2.2.1 | None | SRR16295811 | Other | lineage2.2.1 | None | SRR16295802 | Other | lineage2.2.1 | None | SRR16295819 | Other | lineage2.2.1 | None | SRR16295822 | Other | lineage2.2.1 | None | SRR16295813 | Other | lineage2.2.1 | None | SRR16295826 | Other | lineage2.2.1 | None | SRR16295829 | Other | lineage2.2.1 | None | SRR16295812 | Other | lineage2.2.1 | None | SRR16295820 | Other | lineage2.2.1 | None | SRR16295831 | Other | lineage2.2.1 | None | SRR16295830 | Other | lineage2.2.1 | None | SRR16295814 | Other | lineage2.2.1 | None | SRR16295815 | Sensitive | lineage2.2.1 | None | SRR16295825 | Other | lineage2.2.1 | None | SRR16295824 | Other | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR16295823 | Sensitive | lineage2.2.1 | None | SRR16295821 | Other | lineage2.2.1 | None | SRR16295828 | Other | lineage2.2.1 | None | SRR16295827 | Sensitive | lineage2.2.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR19267901 | Sensitive | lineage2.2.1 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002926 | Other | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18912069 | Other | lineage4.1.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19303799 | Sensitive | lineage4.7 | None | SRR19303805 | Other | lineage4.8 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303815 | Other | lineage4.8 | None | SRR19303985 | Other | lineage4.8 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR19303876 | Other | lineage4.7 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR19303899 | Other | lineage3 | None | SRR20632814 | Sensitive | lineage4 | None | SRR19304104 | Other | lineage4.8 | None | SRR19304094 | Other | lineage6 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR2100537 | Sensitive | lineage3 | None | SRR2100246 | MDR-TB | lineage3.1 | None | SRR21240038 | Other | lineage4.1.2.1 | None | SRR2100532 | Sensitive | lineage3 | None | SRR2101388 | Sensitive | lineage4.1.1 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | SRR21677887 | HR-TB | lineage4 | None | SRR21713567 | Sensitive | lineage4.5 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR21736381 | Sensitive | lineage4.3.2 | None | SRR22048373 | Sensitive | lineage4.1.2.1 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR1462610 | Other | La2 | None | ERR4814584 | Sensitive | lineage4.4.2 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4815204 | Other | lineage2.2.1.1 | gb | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815613 | Other | lineage3 | None | ERR4815257 | HR-TB | lineage4.4.1.1 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4814554 | Other | lineage4.1 | None | SRR3105762 | HR-TB | None | ERR4815443 | HR-TB | lineage4.1 | gb | ERR4815784 | Other | lineage2.2.1 | gb | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4814623 | Other | lineage4.8 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4814674 | Sensitive | lineage3 | gb | ERR4814690 | Sensitive | lineage2.2.1 | None | ERR4814697 | Sensitive | lineage4.4.1.1 | None | ERR4815471 | Other | lineage4.9 | None | ERR1665402 | MDR-TB | lineage2.2.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | SRR3675225 | Other | lineage2.2.1.2 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4818401 | HR-TB | lineage2.2.1 | gb | ERR4812763 | Other | lineage2.2.1 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4814764 | HR-TB | lineage3 | gb | ERR4819551 | Sensitive | lineage3 | gb | SRR3675265 | Other | lineage4 | None | ERR4814852 | Other | lineage4.1.2.1 | None | ERR4814874 | MDR-TB | lineage1.1.2 | None | SRR3675447 | Other | lineage3 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4815551 | Other | lineage2.2.1 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR553231 | Other | lineage4.1.2.1 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4815080 | Other | lineage4.1.2.1 | None | ERR2446456 | HR-TB | lineage4.4.1.1 | None | SRR3675509 | Other | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | ERR4815901 | Other | lineage2.2 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4815919 | Other | lineage4.8 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4815917 | Other | lineage2.2.1 | gb | SRR3675513 | Other | lineage4.8 | None | SRR3675533 | Sensitive | lineage3 | None | ERR4815994 | Other | lineage3 | gb | ERR4816031 | Other | lineage4.3.3 | gb | ERR4816043 | Other | lineage4.2 | None | ERR2027220 | Other | lineage3.1.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4816093 | Other | lineage1.1.3 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR2027256 | Other | lineage4.1.2 | None | ERR4817044 | Other | lineage4.1.1 | None | ERR4816227 | RR-TB | lineage3 | None | ERR4817046 | Other | lineage3 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4817070 | Other | lineage1.1.2 | None | ERR4816470 | Other | lineage3 | None | SRR3675590 | Sensitive | lineage4.8.1 | None | ERR4816493 | Other | lineage4.1.2.1 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816531 | Other | lineage4.1.2 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR216978 | Sensitive | lineage4.3.4.2.1 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816147 | RR-TB | lineage2.2.1 | gb | ERR2027304 | Sensitive | lineage4.1.2.1 | None | ERR4817047 | Other | lineage4.2.2.1 | gb | ERR4816283 | Other | lineage4.1.2.1 | None | SRR3675565 | Other | lineage3 | None | ERR4817069 | RR-TB | None | ERR4816464 | Other | lineage3 | None | SRR3675588 | HR-TB | lineage4.6.2 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4816711 | Sensitive | lineage4.1.1 | gb | ERR4816804 | Other | lineage4.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816813 | Sensitive | lineage4.3.4.2 | None | ERR2229712 | Sensitive | lineage4.8 | None | ERR4817276 | Other | lineage2.2.1 | None | ERR4817273 | Other | lineage1.2.2.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4819041 | Sensitive | lineage4.3.3 | gb | ERR2512954 | Other | La1.8.1 | gb | ERR4817703 | Other | lineage1.1.1 | None | ERR4818655 | Other | lineage4.3.3 | None | ERR4817730 | Other | lineage4.2.1.1 | gb | SRR4034769 | Other | lineage4.1.1 | None | ERR4818691 | Other | lineage4.8 | None | ERR4817800 | Other | lineage3 | gb | ERR4818988 | Other | lineage1 | None | ERR4816425 | Other | lineage2.2.2 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR228175 | Sensitive | lineage3 | None | ERR228180 | Sensitive | lineage3 | None | ERR4817874 | Other | lineage3 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR2510796 | HR-TB | lineage4.3.4.2 | it | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818104 | Other | lineage4.1.2 | gb | ERR2512443 | Other | lineage4.8 | gb | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818178 | Other | lineage4.1.2.1 | None | ERR4818187 | Other | lineage4.6.1.1 | gb | ERR2513462 | Sensitive | lineage3.1.3 | gb | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR4817958 | Other | lineage4.2.1 | None | ERR4817976 | HR-TB | lineage4.1.2.1 | None | ERR2515055 | Other | lineage3 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4818892 | MDR-TB | lineage4.2.2.1 | None | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4818338 | Sensitive | lineage4.8 | gb | ERR4818351 | Other | lineage1.1.3 | None | ERR4818918 | Other | lineage1.1.2 | gb | ERR4818393 | RR-TB | lineage3 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818436 | Other | lineage4.8 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR2513259 | Other | lineage3 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818545 | Other | lineage4.1.2 | gb | ERR4818570 | Other | lineage4.3.3 | None | ERR2513298 | Other | lineage4.8 | gb | ERR4818574 | Other | lineage6 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR4817555 | RR-TB | lineage3 | None | ERR2512841 | HR-TB | lineage2.2.1 | gb | ERR4817547 | Other | lineage4.2.2.1 | None | ERR4817568 | Other | lineage4.1.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR4818964 | Other | lineage1.2.1.2.1 | None | ERR4817640 | Sensitive | lineage4.1.1.3 | gb | ERR2512941 | Other | lineage1.1.2 | None | ERR4819087 | Other | lineage4.3.3 | None | ERR2513619 | Other | lineage4.8 | gb | ERR4819119 | HR-TB | lineage1.2.1.2.1 | gb | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR2513681 | Other | lineage1.1.2 | None | ERR4819176 | Other | lineage3.1.1 | gb | SRR5152936 | MDR-TB | lineage2.2.1 | None | ERR4819166 | Other | lineage3 | gb | ERR4820230 | Other | lineage4.1.2.1 | gb | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR2513743 | Other | lineage4.1.2 | None | ERR4820247 | HR-TB | lineage4.9 | None | ERR4819192 | Other | lineage3 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4820270 | MDR-TB | lineage4.8 | gb | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4820713 | HR-TB | lineage4.8 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR4819314 | Other | lineage1.1.1 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4819324 | Other | lineage4.8 | gb | ERR4819357 | Other | lineage4.9 | None | ERR4819481 | Other | lineage4.3.3 | None | ERR4819456 | Other | lineage4.8 | None | ERR4820829 | Other | lineage4.8 | None | ERR4819593 | Other | lineage4.5 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4819655 | Other | lineage4.8 | None | ERR4819679 | Other | lineage3 | None | ERR2514488 | Sensitive | lineage4.8 | gb | ERR4819720 | Other | lineage3.1.2.1 | gb | ERR4820891 | Other | lineage4.9 | gb | ERR2514565 | Other | lineage3.1.2.1 | gb | ERR4819770 | Other | lineage4.8 | gb | ERR2513819 | Pre-XDR-TB | lineage4.3.3 | gb | ERR4819830 | Other | lineage2.2.1 | None | SAMN02584601 | Other | lineage2.2.1 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4819967 | Other | lineage4.3.3 | None | ERR2514962 | Other | lineage4.4 | None | ERR4820742 | Other | lineage4.3.4.2.1 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819555 | Other | lineage4.8 | None | ERR4819565 | Sensitive | lineage4.8 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4819630 | Other | lineage4.8 | gb | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819731 | Other | lineage4.1.2.1 | gb | ERR4820484 | Other | lineage4.8 | None | ERR2514668 | Other | lineage4.8.1 | gb | ERR4820889 | Other | lineage3 | gb | ERR2514811 | Other | lineage3.1.2 | gb | ERR4819933 | Other | lineage4.9 | None | ERR4820827 | Other | lineage4.1.2 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None |
|---|
