EBG00000313325 - n.639A>T
Drug resistance types
17 Sensitive
39 RR-TB
9 HR-TB
25 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
99 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 24 |
| lineage4.1.2.1 | 14 |
| lineage4.8 | 20 |
| lineage6.1.3 | 1 |
| lineage4.9 | 39 |
| 8 | |
| lineage4.1.1.3 | 4 |
| lineage1.1.3.1 | 1 |
| lineage4.2.2.2 | 3 |
| lineage2.2.1 | 18 |
| lineage4.2.1 | 2 |
| lineage4.8.2 | 1 |
| lineage3.1.1 | 2 |
| lineage4 | 6 |
| lineage1.1.2 | 4 |
| lineage4.7 | 2 |
| lineage4.3.1 | 1 |
| lineage4.3.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2 | 2 |
| lineage2.2.2 | 2 |
| lineage4.3.3 | 6 |
| lineage4.3 | 1 |
| lineage4.3.4.2 | 3 |
| lineage1.1.1.1 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.2.1 | 4 |
| La1.6 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.5 | 2 |
| lineage4.1.1.3.1 | 3 |
| lineage6 | 1 |
| lineage1.1.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage3.1.2.1 | 4 |
| lineage5 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3.1 | 1 |
| lineage4.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.1.2 | 1 |
| lineage1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.6.1 | 1 |
| lineage1.2.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 201 |
Geographic prevalence
Country level data for this variant is available for 19 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4820193 | Other | lineage3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821438 | Other | lineage3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821519 | Other | lineage3 | gb | ERR4821564 | Sensitive | lineage4.2.2.2 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR5818410 | Sensitive | lineage4.9 | None | ERR4821718 | Other | lineage4.2.2.2 | gb | SRR6045664 | Other | lineage4.2.1 | None | SRR5818391 | Other | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | ERR4821725 | Other | lineage4.8.2 | gb | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818430 | Sensitive | lineage4.9 | None | SRR5818437 | MDR-TB | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818421 | Sensitive | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818441 | Other | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6046152 | Other | lineage4.9 | None | SRR5818663 | Sensitive | lineage4.1.2.1 | dj | SRR6044784 | MDR-TB | lineage3 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6044904 | Other | lineage3 | None | SRR6044936 | Other | lineage4 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046020 | Other | lineage3 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR4829360 | Sensitive | lineage4.7 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046246 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046818 | Other | lineage4.2.1 | gb | SRR6046534 | Other | lineage1.1.2 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | SRR6046852 | MDR-TB | lineage3 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | SRR6046815 | Other | lineage3 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR10796561 | Other | lineage4.3.2 | None | DRR034348 | Other | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796615 | Other | lineage4 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10796634 | Other | lineage4 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR4797281 | Sensitive | lineage4.3.3 | in | ERR6197022 | Other | lineage4.9 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR9117747 | HR-TB | lineage4.8 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR9117788 | Other | lineage3 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10993951 | RR-TB | La1.6 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1140736 | RR-TB | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173740 | Other | None | SRR12199457 | Sensitive | lineage4.9;lineage1.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18213726 | Other | lineage3 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18213684 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR19304094 | Other | lineage6 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR22424743 | Pre-XDR-TB | lineage1.1.2 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4815278 | Other | lineage4.8 | None | ERR4815777 | Other | lineage4.9 | None | ERR4814699 | HR-TB | lineage4.1.2.1 | gb | ERR4815613 | Other | lineage3 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4814748 | Other | lineage4.8 | None | ERR4814801 | Other | lineage4.8 | gb | ERR4814905 | Other | lineage4.8 | gb | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4815022 | Other | lineage3.1.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4815994 | Other | lineage3 | gb | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR5818419 | Sensitive | None | ERR2027250 | Other | lineage3.1.2 | None | ERR4816183 | Other | None | ERR4816417 | Other | lineage4.9 | None | ERR2228809 | Sensitive | lineage4.8 | None | ERR4816571 | Other | lineage1.1.2 | None | SRR5818426 | Other | None | ERR2228806 | Sensitive | lineage4.8 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4818831 | Other | lineage3 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818126 | RR-TB | lineage1 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818272 | Other | lineage4.3.2 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR2513273 | Other | lineage4.1.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818538 | Other | lineage3 | gb | SRR5007165 | MDR-TB | lineage3 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4817555 | RR-TB | lineage3 | None | ERR4818634 | Other | lineage4.6.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR5818458 | Other | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4819528 | RR-TB | lineage3 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4819456 | Other | lineage4.8 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR2514565 | Other | lineage3.1.2.1 | gb | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819723 | Other | None | ERR2514613 | Other | lineage4.8 | gb | ERR2514576 | Other | lineage4.8 | gb | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4819863 | RR-TB | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4820030 | Other | lineage4.9 | None |
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