EBG00000313325 - n.639A>T


Drug resistance types
17 Sensitive 39 RR-TB 6 HR-TB 25 MDR-TB 12 Pre-XDR-TB 0 XDR-TB 87 Other
lineage Counts
lineage Count
lineage3 21
8
lineage4.9 39
lineage4.1.2.1 12
lineage4.2.2.2 3
lineage1.1.3.1 1
lineage2.2.1 17
lineage4.2.1 1
lineage4 6
lineage1.1.2 4
lineage3.1.1 2
lineage4.3.1.1 1
lineage4.7 2
lineage4.3.1 1
lineage4.8 17
lineage4.1.1.3 4
lineage2.2.2 2
lineage2.2.1.1 1
lineage4.4.2 1
lineage4.6.1.1 1
lineage4.3.3 5
lineage4.3.2 2
lineage1.1.1.1 1
lineage4.3.4.2 3
lineage4.3 1
lineage1.2.2.2 2
lineage4.4.1.1 1
lineage4.4.1.1;lineage4.1.2.1 1
lineage4.3.4.2.1 4
La1.6 1
lineage4.9;lineage1.1 1
lineage4.5 1
lineage4.1.1.3.1 3
lineage6 1
lineage1.1.1 1
lineage4.1 1
lineage3.1.2.1 2
lineage5 1
lineage3.1.2 1
lineage1.2.1.1 1
lineage3.1 1
lineage4.6.1.2 1
lineage4.1.2 1
lineage1 1
lineage4.1.1 1
lineage4.6.1 1
lineage1.2.1.2.1 1
lineage6.1.3 1
spoligotype Counts
spoligotype Count
None 186
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4821438 Other lineage3 None
ERR4821214 RR-TB None
ERR4821172 RR-TB lineage4.9 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4821981 Other lineage4.1.2.1 None
SRR5818395 Sensitive lineage4.9 None
ERR4822138 Other lineage4.1.2.1 None
ERR4821564 Sensitive lineage4.2.2.2 None
ERR4821616 Other lineage1.1.3.1 None
ERR4822261 RR-TB lineage2.2.1 None
SRR6045664 Other lineage4.2.1 None
SRR5818391 Other lineage4.9 None
SRR5818404 Other lineage4.9 None
SRR5818429 Sensitive lineage4.9 None
SRR5818430 Sensitive lineage4.9 None
SRR5818435 Sensitive lineage4.9 None
SRR5818410 Sensitive lineage4.9 None
SRR5818448 Other lineage4.9 None
SRR5818437 MDR-TB lineage4.9 None
SRR5818421 Sensitive lineage4.9 None
SRR5818441 Other lineage4.9 None
SRR5818460 Other lineage4.9 None
SRR5818449 MDR-TB lineage4.9 None
SRR6044936 Other lineage4 None
SRR5818466 Other lineage4.9 None
SRR6046152 Other lineage4.9 None
SRR6045843 Other lineage4.2.2.2 None
SRR6044784 MDR-TB lineage3 None
SRR6045957 Other lineage4.9 None
SRR6044904 Other lineage3 None
SRR6045424 Other lineage1.1.2 None
SRR6044983 Other lineage3.1.1 None
SRR6046020 Other lineage3 None
SRR6045124 Other lineage4.9 None
SRR6045267 RR-TB lineage4 None
SRR6046250 Other lineage4.9 None
SRR6046246 Other lineage3 None
ERR502474 Pre-XDR-TB lineage4.9 None
SRR6046534 Other lineage1.1.2 None
SRR6046616 Other lineage4.3.1.1 None
SRR6046815 Other lineage3 None
SRR6046852 MDR-TB lineage3 None
ERR502473 Pre-XDR-TB lineage4.9 None
SRR6046359 Other lineage4.7 None
SRR6046343 Other lineage2.2.1 None
ERR4829039 RR-TB lineage4.3.1 None
ERR4829360 Sensitive lineage4.7 None
ERR4814905 Sensitive lineage4.8 gb
ERR502478 RR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
SRR9971246 MDR-TB lineage4.1.1.3 None
ERR502481 Pre-XDR-TB lineage4.9 None
DRR185024 Other lineage2.2.2 None
SRR7131287 Other lineage2.2.1.1 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR7535047 RR-TB lineage4.6.1.1 None
DRR034348 Other lineage2.2.1 None
ERR10796558 Sensitive lineage4 None
ERR4819175 Other lineage4.1.1.3 gb
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR10796563 Other lineage4.3.3 None
ERR10796565 RR-TB lineage4.9 None
ERR10796595 Other lineage4.9 None
ERR10796615 Other lineage4 None
ERR10796632 Other lineage4.3.3 None
ERR4821718 Sensitive lineage4.2.2.2 gb
ERR4821962 Other lineage4.1.1.3 gb
ERR10796561 Other lineage4.3.2 None
ERR10796564 Other lineage4.3.3 None
ERR10796634 Other lineage4 None
ERR6197024 RR-TB lineage4.9 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR6197022 Other lineage4.9 None
ERR6197038 HR-TB lineage4.9 None
ERR6197034 Other lineage4.9 None
ERR9117740 Other lineage3.1.1 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR6197043 MDR-TB lineage4.3.4.2 None
ERR9117760 HR-TB lineage4.3 None
ERR9117747 HR-TB lineage4.8 None
ERR9117827 Other lineage1.2.2.2 None
ERR9117788 Other lineage3 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1062928 RR-TB lineage4 None
SRR10993951 RR-TB La1.6 None
SRR1140736 RR-TB None
SRR1140716 Pre-XDR-TB lineage3 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR1173170 Other lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1173770 Other lineage4.9 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR1735596 RR-TB lineage4.9 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1173740 Other None
SRR12199457 Sensitive lineage4.9;lineage1.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002954 Other lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
SRR18003031 HR-TB lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003042 Other lineage2.2.1 None
SRR18213684 Pre-XDR-TB lineage4.1.1.3.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18213721 Other lineage4.8 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR18213736 MDR-TB lineage3 None
SRR19304094 Other lineage6 None
SRR18213726 Other lineage3 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR22424743 Pre-XDR-TB lineage1.1.2 None
SRR21658550 Other lineage1.1.1 None
ERR4815777 Other lineage4.9 None
ERR4815613 Other lineage3 None
SAMEA3501065 RR-TB lineage4.8 None
ERR4815278 Other lineage4.8 None
SRR3675230 RR-TB lineage3 None
SRR3675245 Other lineage4.1.2.1 None
ERR4814748 Other lineage4.8 None
ERR4815502 Other lineage4.1 None
SAMEA3501015 Other lineage4.8 None
ERR4815022 Other lineage3.1.2.1 None
ERR4813263 MDR-TB lineage4.8 None
SRR5818419 Sensitive None
ERR4816967 RR-TB lineage5 None
ERR2027250 Other lineage3.1.2 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027290 RR-TB lineage3.1 None
ERR4816183 Other None
ERR4816571 Other lineage1.1.2 None
ERR4816310 HR-TB lineage4.6.1.2 None
ERR4816417 Other lineage4.9 None
SRR3675552 RR-TB lineage4.9 None
ERR2228809 Sensitive lineage4.8 None
ERR2228806 Sensitive lineage4.8 None
SRR5818426 Other None
ERR4819011 Other lineage3.1.2.1 None
ERR4817294 Other lineage4.1.2 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
SAMEA3450033 Other lineage4.8 None
ERR4818126 RR-TB lineage1 None
ERR4818272 Other lineage4.3.2 None
ERR4818831 Other lineage3 None
ERR4818259 RR-TB lineage4.1.1 None
SAMEA3501063 RR-TB lineage4.8 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR2513273 Other lineage4.1.2.1 None
ERR4818507 RR-TB lineage4.1.2.1 None
SRR5007165 MDR-TB lineage3 None
ERR4817584 MDR-TB lineage3 None
ERR4817555 RR-TB lineage3 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR4819456 Other lineage4.8 None
SAMEA3501067 RR-TB lineage4.8 None
ERR4819217 Other lineage1.2.2.2 None
ERR4818634 Other lineage4.6.1 None
ERR4818977 RR-TB lineage4.1.2.1 None
SRR5818458 Other None
ERR4819383 RR-TB lineage4.9 None
ERR4819723 Other None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR2514181 Other lineage1.2.1.2.1 None
ERR4819528 RR-TB lineage3 None
SAMEA3501070 RR-TB lineage4.8 None
ERR4819784 Other lineage4.1.2.1 None
ERR4819863 RR-TB lineage4.9 None
ERR4820030 Other lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
ERR4820193 Other lineage3 None
ERR4821769 Other lineage4.1.2.1 None
SAMEA3501046 RR-TB lineage4.8 None
SRR6045496 Other lineage6.1.3 None