EBG00000313325 - n.639A>T
Drug resistance types
11 Sensitive
31 RR-TB
4 HR-TB
17 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
61 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.8 | 36 |
| lineage4.3.4.2.1 | 5 |
| lineage4.1.2.1 | 6 |
| lineage4.8.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.9 | 26 |
| lineage4.1.1.3 | 4 |
| lineage4.1.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage3;lineage4 | 2 |
| lineage4.7 | 1 |
| lineage4.3.3 | 4 |
| lineage4.4.1.1 | 1 |
| lineage3 | 5 |
| lineage2.2.2 | 3 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage2.2.1 | 9 |
| lineage4.6.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage1.1.1.1 | 1 |
| La1.6 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.6 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.2.2.2 | 3 |
| lineage3.1.2.1 | 2 |
| lineage4.2.1 | 2 |
| lineage4.3.4.1 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 131 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR7069473 | Other | lineage4.1.1.2 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR978694 | Other | lineage4.8 | None | SRR5818395 | Sensitive | lineage4.9 | None | ERR978756 | Other | lineage4.8 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR7069837 | Sensitive | lineage4.1.1.3 | None | SRR7069391 | Other | lineage4.9 | None | ERR978747 | Other | lineage4.8 | None | SRR5818429 | Sensitive | lineage4.9 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR867575 | Other | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4816571 | Sensitive | lineage1.1.2 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR867573 | Other | lineage4.9 | None | ERR978735 | Other | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR4829360 | Sensitive | lineage4.7 | None | ERR978748 | Other | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR978727 | Other | lineage4.8 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR502473 | RR-TB | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR5818391 | Other | lineage4.9 | None | ERR978751 | Other | lineage4.8 | None | SRR1140716 | Other | lineage3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4820193 | Other | lineage3 | None | ERR4818272 | Other | lineage4.3.2 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4814905 | Sensitive | lineage4.8 | gb | ERR978734 | RR-TB | lineage4.8 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR867571 | Other | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR978755 | RR-TB | lineage4.8 | None | SRR10993951 | RR-TB | La1.6 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR6044936 | Other | lineage4.6 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR4821718 | Sensitive | lineage4.2.2.2 | gb | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR3675552 | Other | lineage4.9 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR5818449 | MDR-TB | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR978762 | Other | lineage4.8 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | ERR911930 | Other | lineage4.8 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR4820030 | Other | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR5818460 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR1173281 | Other | lineage3 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | DRR185024 | Other | lineage2.2.2 | None | ERR4818831 | Other | lineage3 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR978752 | Other | lineage4.8 | None | ERR911929 | Other | lineage4.8 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | DRR034348 | Other | lineage2.2.1 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR978761 | Other | lineage4.8 | None | ERR2027250 | Other | lineage3.1.2 | None | ERR867569 | Other | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR10796632 | Other | lineage4.3.3 | None |
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