EBG00000313325 - n.571C>T
Drug resistance types
29 Sensitive
13 RR-TB
10 HR-TB
22 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
73 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 80 |
| lineage1.1.2 | 2 |
| lineage3;lineage4 | 2 |
| lineage2.2.1 | 15 |
| lineage4.4.1.1 | 2 |
| lineage4.4.1.1.1 | 3 |
| lineage4.1.1.3 | 2 |
| lineage4.2.2 | 1 |
| lineage3 | 4 |
| lineage4.8.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.2 | 2 |
| lineage4.1.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage3.1.2.1 | 2 |
| lineage4.1.2.1 | 2 |
| lineage4.1.1.1 | 3 |
| lineage4.3.4.1 | 1 |
| lineage4.3.3 | 4 |
| lineage4.8 | 4 |
| lineage1.1.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage6.1.3 | 2 |
| lineage4.2.1 | 3 |
| lineage4.3.4.2 | 2 |
| lineage2.2.1.1 | 2 |
| La1.8.1 | 1 |
| lineage4.2.2.2 | 2 |
| La2 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage2;lineage4 | 1 |
| lineage3.1.2 | 1 |
| lineage4.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 156 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5818460 | Other | lineage4.9 | None | SRR6797518 | Sensitive | lineage1.1.2 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR5818436 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR5818386 | Other | lineage4.9 | None | SRR5818413 | Sensitive | lineage4.9 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR5818421 | Sensitive | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818409 | Other | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | DRR188816 | Sensitive | lineage4.2.2 | None | SRR5818408 | Other | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818396 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR3675552 | Other | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR5818399 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR5818445 | Other | lineage4.9 | None | SRR5818419 | Sensitive | lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR5818458 | Other | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR5818405 | Other | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR867571 | Other | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | ERR10796577 | Other | lineage4.9 | None | SRR5818469 | Other | lineage4.9 | None | ERR10796635 | Other | lineage4.8 | None | ERR9786076 | Sensitive | lineage3 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR867544 | Other | lineage4.9 | None | SRR5073604 | Sensitive | lineage1.1.1 | vn | SRR5818411 | RR-TB | lineage4.9 | None | SRR5818423 | RR-TB | lineage4.9 | None | SRR5818453 | Sensitive | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR5818446 | Other | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR28044444 | Sensitive | lineage1.1.2 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR6045957 | Other | lineage4.9 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR7236374 | Other | La1.8.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR5818385 | Other | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR5818426 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR5818410 | Sensitive | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR323037 | Other | lineage4.9 | None | SRR5818437 | RR-TB | lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818427 | HR-TB | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR2027250 | Other | lineage3.1.2 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR5818422 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR18913750 | Other | lineage2.2.1 | None | SRR11342669 | Other | lineage4.8 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR7131123 | Other | lineage4.8 | None | ERR10796589 | Other | lineage4.9 | None | ERR3806588 | Other | lineage6.1.3 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818456 | Other | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | SRR7070369 | Other | lineage1.2.2.2 | None |
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