EBG00000313325 - n.571C>T
Drug resistance types
26 Sensitive
36 RR-TB
19 HR-TB
24 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
170 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 30 |
| lineage4.9 | 80 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4 | 20 |
| lineage3 | 28 |
| lineage4.6 | 2 |
| lineage1.2.2.2 | 2 |
| 12 | |
| lineage6 | 3 |
| lineage4.4.1.1 | 4 |
| lineage4.4.1.1.1 | 1 |
| La2 | 1 |
| lineage4.5 | 2 |
| lineage2.2.2 | 1 |
| lineage4.8 | 9 |
| lineage2.2.1.1 | 4 |
| lineage4.1.1.3 | 3 |
| lineage1.2.1.2.1 | 2 |
| lineage4.1.2.1 | 15 |
| lineage1.1.2 | 4 |
| lineage1.2.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.3 | 9 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage5 | 2 |
| lineage4.3.4.2 | 2 |
| lineage3.1.3 | 1 |
| lineage3.1.2.1 | 3 |
| lineage1.2.1.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage3.1.2 | 2 |
| lineage3.1 | 1 |
| lineage1 | 2 |
| lineage1.1.1 | 1 |
| lineage4.3.2 | 2 |
| lineage4.1.1 | 3 |
| lineage4.1.1.3.1 | 3 |
| lineage4.3.4.1 | 3 |
| lineage1.1.3.1 | 2 |
| lineage3.1.1 | 4 |
| lineage4.1.2 | 1 |
| lineage4.1.3 | 1 |
| La1.6 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.1.1 | 2 |
| lineage4.4 | 1 |
| lineage3.1.2.2 | 2 |
| lineage4.7 | 1 |
| lineage1.1.1.1 | 2 |
| lineage4.3.1 | 1 |
| lineage4.6.5 | 1 |
| lineage4.4.2 | 1 |
| lineage4.2.2 | 1 |
| lineage4.9;lineage4.1 | 1 |
| La1.8.1 | 1 |
| lineage4.3.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 289 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR9117759 | Other | lineage3 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117788 | Other | lineage3 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR1173740 | Other | None | ERR9787336 | Other | lineage6 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1173281 | RR-TB | lineage3 | None | SRR13888750 | Other | La2 | None | SRR1180252 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11972427 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002951 | Other | lineage4.5 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18213726 | Other | lineage3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18913750 | Other | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR21595825 | Other | lineage1.2.1.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19304094 | Other | lineage6 | None | SRR19303917 | Other | lineage2.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR22048375 | Other | lineage4.1.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR22424743 | Pre-XDR-TB | lineage1.1.2 | None | ERR4814312 | Other | lineage4 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR4814700 | Other | lineage4.3.3 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR3675265 | Other | lineage4 | None | ERR4814775 | Other | lineage1.1.2 | None | ERR4815994 | Other | lineage3 | gb | ERR4815572 | Other | lineage4.1.2.1 | None | SRR5818419 | Sensitive | None | ERR4815898 | Other | lineage3 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4814986 | Other | lineage4.3.4.2 | None | SRR3675509 | Other | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | ERR2027220 | Other | lineage3.1.3 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR2027250 | Other | lineage3.1.2 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4818988 | Other | lineage1 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4817175 | Other | lineage4.8 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816756 | RR-TB | None | SRR5818386 | Other | None | SRR6045972 | Pre-XDR-TB | lineage4.3.3 | gb | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816699 | Other | lineage4.6 | None | SRR5818426 | Other | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | SRR5073604 | Sensitive | lineage1.1.1 | vn | ERR4818407 | Other | lineage4.3.2 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4817555 | RR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5818458 | Other | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4819140 | Other | lineage4.1.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4819217 | Other | lineage1.2.2.2 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4819414 | Other | lineage1.1.3.1 | gb | ERR4820324 | Other | lineage4 | None | ERR4820334 | Other | lineage4.4.1.1 | gb | ERR4819456 | Other | lineage4.8 | None | ERR4819462 | Other | lineage4 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4820746 | RR-TB | lineage3 | None | ERR1023509 | Other | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819720 | Other | lineage3.1.2.1 | gb | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819933 | Other | lineage4.9 | None | ERR4820827 | Other | lineage4.1.2 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820107 | RR-TB | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820184 | MDR-TB | lineage3 | gb | ERR4821812 | Other | lineage4.8 | gb | ERR4820188 | Other | lineage3 | gb | ERR4820922 | Other | lineage4.1.2.1 | gb | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821214 | RR-TB | None | SRR5818445 | Other | None | SRR6045485 | Other | lineage4.9 | None | SRR6045432 | Other | lineage3 | gb | SRR6046117 | RR-TB | lineage4.9 | None | ERR4822190 | Other | lineage1.1.3.1 | gb | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4821958 | Other | lineage4.3.3 | gb | ERR4821310 | Other | lineage5 | None | ERR4821773 | Other | La1.6 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6046210 | Other | lineage4 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818385 | Other | lineage4.9 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6046141 | Other | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818402 | Other | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818405 | Sensitive | lineage4.9 | None | SRR5818396 | Other | lineage4.9 | None | SRR5818411 | MDR-TB | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | SRR5818409 | Other | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818413 | HR-TB | lineage4.9 | None | SRR5818410 | Sensitive | lineage4.9 | None | SRR5818422 | Other | lineage4.9 | None | SRR5818423 | MDR-TB | lineage4.9 | None | SRR5818430 | Sensitive | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818437 | MDR-TB | lineage4.9 | None | SRR5818436 | Sensitive | lineage4.9 | None | SRR5818427 | HR-TB | lineage4.9 | None | SRR5818440 | Other | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818446 | Other | lineage4.9 | None | SRR5818421 | Sensitive | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | SRR5818456 | Other | lineage4.9 | None | SRR5818453 | Sensitive | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | SRR5818469 | Other | lineage4.9 | None | SRR5818457 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045759 | RR-TB | lineage2.2.1 | gb | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6044787 | Other | lineage4.4 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044936 | Other | lineage4 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR6044993 | Other | lineage3 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6046385 | Other | lineage4.9 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045222 | Other | lineage4.1.2.1 | None | SRR6045243 | Sensitive | lineage4.1.1 | gb | SRR6045267 | RR-TB | lineage4 | None | SRR6045289 | Other | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046359 | Other | lineage4.7 | None | SRR6045056 | Other | lineage2.2.1 | gb | SRR6046020 | Other | lineage3 | None | SRR6046208 | Other | lineage4 | None | SRR6046246 | Other | lineage3 | None | SRR6046291 | Other | lineage3 | None | ERR2843448 | Sensitive | lineage1.1.1.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR4828414 | Sensitive | lineage1.1.1.1 | vn | SRR6046442 | Other | lineage3 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046729 | Other | None | SRR6046766 | Other | lineage3.1.1 | None | ERR323037 | HR-TB | lineage4 | None | SRR6046815 | Other | lineage3 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046852 | MDR-TB | lineage3 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR7131123 | Other | lineage4.8 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6797518 | Sensitive | lineage1.1.2 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR10796572 | Other | lineage4.3.4.1 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR1063855 | Other | lineage4 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR3439441 | Other | La1.8.1 | None | ERR10796629 | Other | lineage4 | None | ERR10796635 | Other | lineage4 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796611 | Other | lineage4.9 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796627 | Other | lineage4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR3806588 | Other | lineage6 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None |
|---|
