EBG00000313325 - n.571C>T


Drug resistance types
24 Sensitive 35 RR-TB 19 HR-TB 23 MDR-TB 13 Pre-XDR-TB 0 XDR-TB 158 Other
lineage Counts
lineage Count
lineage2.2.1 28
lineage4.8 7
lineage6 3
lineage1.2.1.2.1 2
lineage1.1.2 4
lineage4.1.2.1 14
lineage2.2.1.1 4
lineage1.2.2 1
lineage4.3.3 7
lineage4.3.4.2.1 2
lineage4 20
lineage4.9;lineage3.1.1 1
lineage3 24
lineage4.9 80
lineage4.3.4.2 2
12
lineage5 2
lineage3.1.3 1
lineage3.1.2 2
lineage3.1 1
lineage1.2.1.1 1
lineage4.6 2
lineage4.6.1.2 1
lineage3.1.2.1 2
lineage1.1.1 1
lineage1 2
lineage4.1.1 2
lineage4.3.2 2
lineage4.1.1.3.1 3
lineage1.2.2.2 2
lineage4.3.4.1 3
lineage3.1.1 4
lineage4.1.2 1
lineage4.4.1.1 3
lineage4.1.3 1
lineage4.2.1 1
La1.6 1
lineage4.1.1.3 3
lineage4.3.1.1 2
lineage4.4 1
lineage3.1.2.2 2
lineage4.7 1
lineage1.1.1.1 1
lineage4.3.1 1
lineage4.6.5 1
lineage4.4.2 1
lineage4.2.2 1
lineage4.9;lineage4.1 1
lineage4.3.4 1
La1.8.1 1
lineage4.5;lineage2.2.1 1
lineage4.4.1.1.1 1
La2 1
lineage4.5 2
lineage2.2.2 1
spoligotype Counts
spoligotype Count
None 272
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR18913750 Other lineage2.2.1 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR19303917 Other lineage2.2.1 None
SRR19304094 Other lineage6 None
SRR21595825 Other lineage1.2.1.2.1 None
SRR22424743 Pre-XDR-TB lineage1.1.2 None
SRR22048375 Other lineage4.1.2.1 None
SRR21727760 Other lineage2.2.1 None
SRR22424778 RR-TB lineage2.2.1.1 None
ERR4815225 RR-TB lineage1.2.2 None
ERR4814700 Other lineage4.3.3 None
ERR4815298 Other lineage4.3.4.2.1 None
ERR4814312 Other lineage4 None
ERR4819579 HR-TB lineage4.3.3 None
ERR171142 Other lineage4.9;lineage3.1.1 None
SRR3675230 RR-TB lineage3 None
ERR4815471 Other lineage4.9 None
ERR4814775 Other lineage1.1.2 None
ERR4814896 Other lineage2.2.1.1 None
SRR3675265 Other lineage4 None
ERR4814986 Other lineage4.3.4.2 None
ERR4816964 Other lineage4.9 None
ERR4815572 Other lineage4.1.2.1 None
SRR5818419 Sensitive None
SRR3675509 Other lineage4.9 None
ERR4815898 Other lineage3 None
ERR4816967 RR-TB lineage5 None
ERR4815910 Other lineage4.1.2.1 None
ERR2027220 Other lineage3.1.3 None
SRR3675552 RR-TB lineage4.9 None
ERR2027250 Other lineage3.1.2 None
ERR2027290 RR-TB lineage3.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR4816699 Other lineage4.6 None
ERR4816310 HR-TB lineage4.6.1.2 None
ERR4816476 Other lineage3.1.2.1 None
ERR4817175 Other lineage4.8 None
ERR216965 HR-TB lineage4.9 None
ERR4816610 RR-TB lineage4.3.3 None
SRR5073604 Sensitive lineage1.1.1 vn
SRR5818426 Other None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816756 RR-TB None
SRR5818386 Other None
ERR4819002 HR-TB lineage4.8 None
ERR4818988 Other lineage1 None
ERR4818710 Sensitive lineage4.9 None
ERR4818126 RR-TB lineage1 None
ERR4819011 Other lineage3.1.2.1 None
ERR4819007 Other lineage2.2.1 None
ERR4817555 RR-TB lineage3 None
ERR4818507 RR-TB lineage4.1.2.1 None
ERR4818583 Other lineage4.3.3 None
ERR4818173 Other lineage2.2.1 None
ERR4818259 RR-TB lineage4.1.1 None
ERR4818407 Other lineage4.3.2 None
ERR4818522 Pre-XDR-TB lineage3 None
ERR4818536 Other lineage4.9 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007165 MDR-TB lineage3 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR4819217 Other lineage1.2.2.2 None
SRR5007204 Other lineage4.1.2.1 None
ERR4819140 Other lineage4.1.2.1 None
SRR5818458 Other None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4817584 MDR-TB lineage3 None
ERR4818977 RR-TB lineage4.1.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4820265 Other lineage4.1.2.1 None
ERR4819265 HR-TB lineage4.3.4.1 None
ERR4819357 Other lineage4.9 None
ERR4820324 Other lineage4 None
ERR4820746 RR-TB lineage3 None
ERR4819462 Other lineage4 None
ERR4819456 Other lineage4.8 None
ERR2514181 Other lineage1.2.1.2.1 None
ERR4819491 Other lineage4.1.2.1 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819528 RR-TB lineage3 None
ERR4820827 Other lineage4.1.2 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR1023509 Other None
ERR4819933 Other lineage4.9 None
SRR5818445 Other None
ERR4819948 Other lineage4.4.1.1 None
ERR4820107 RR-TB None
ERR4820019 Other lineage4.3.4.2.1 None
ERR4820959 Other lineage4.1.2.1 None
ERR4821310 Other lineage5 None
ERR4821214 RR-TB None
ERR4821981 Other lineage4.1.2.1 None
SRR6045485 Other lineage4.9 None
SRR6046117 RR-TB lineage4.9 None
ERR4821334 RR-TB lineage4.1.3 None
SRR6045664 Other lineage4.2.1 None
ERR4821679 Other lineage4.3.3 None
ERR4821773 Other La1.6 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045621 Other lineage4.1.1.3 None
SRR6046210 Other lineage4 None
SRR5818388 Other lineage4.9 None
SRR6045683 Other lineage3.1.2 None
SRR5818385 Other lineage4.9 None
SRR6046141 Other lineage4.9 None
SRR5818395 Sensitive lineage4.9 None
SRR5818399 Sensitive lineage4.9 None
SRR5818397 Other lineage4.9 None
SRR5818398 Other lineage4.9 None
SRR5818408 Other lineage4.9 None
SRR5818389 Other lineage4.9 None
SRR5818405 Sensitive lineage4.9 None
SRR5818411 MDR-TB lineage4.9 None
SRR5818402 Other lineage4.9 None
SRR5818396 Other lineage4.9 None
SRR5818414 Other lineage4.9 None
SRR5818404 Other lineage4.9 None
SRR5818409 Other lineage4.9 None
SRR5818410 Sensitive lineage4.9 None
SRR5818422 Other lineage4.9 None
SRR5818423 MDR-TB lineage4.9 None
SRR5818432 MDR-TB lineage4.9 None
SRR5818413 HR-TB lineage4.9 None
SRR5818430 Sensitive lineage4.9 None
SRR5818427 HR-TB lineage4.9 None
SRR5818435 Sensitive lineage4.9 None
SRR5818425 Other lineage4.9 None
SRR5818429 Sensitive lineage4.9 None
SRR5818440 Other lineage4.9 None
SRR5818436 Sensitive lineage4.9 None
SRR5818446 Other lineage4.9 None
SRR5818437 MDR-TB lineage4.9 None
SRR5818421 Sensitive lineage4.9 None
SRR5818448 Other lineage4.9 None
SRR5818460 Other lineage4.9 None
SRR5818452 Other lineage4.9 None
SRR5818453 Sensitive lineage4.9 None
SRR5818449 MDR-TB lineage4.9 None
SRR5818456 Other lineage4.9 None
SRR5818459 Other lineage4.9 None
SRR6045832 HR-TB lineage4.9 None
SRR5818470 Other lineage4.9 None
SRR5818469 Other lineage4.9 None
SRR5818462 Other lineage4.9 None
SRR5818457 Other lineage4.9 None
SRR6045805 Other lineage4.3.1.1 None
SRR6046208 Other lineage4 None
SRR6044787 Other lineage4.4 None
SRR6044936 Other lineage4 None
SRR6045957 Other lineage4.9 None
SRR6044993 Other lineage3 None
SRR6046020 Other lineage3 None
SRR6044784 MDR-TB lineage3 None
SRR6045909 Other lineage4.8 None
SRR6045928 Other lineage4.9 None
SRR6044904 Other lineage3 None
SRR6044983 Other lineage3.1.1 None
SRR6045017 Other lineage3.1.2.2 None
SRR6045222 Other lineage4.1.2.1 None
SRR6045267 RR-TB lineage4 None
SRR6046246 Other lineage3 None
SRR6045289 Other None
SRR6046376 Other lineage3 None
SRR6046359 Other lineage4.7 None
SRR6046275 Other lineage3.1.1 None
SRR6046291 Other lineage3 None
SRR6046385 Other lineage4.9 None
ERR2843448 Sensitive lineage1.1.1.1 None
ERR2851356 Sensitive lineage4.9 None
ERR4829039 RR-TB lineage4.3.1 None
SRR6046729 Other None
SRR6046440 Other lineage3.1.2.2 None
SRR6046442 Other lineage3 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046534 Other lineage1.1.2 None
SRR6046616 Other lineage4.3.1.1 None
SRR6046848 Other lineage4.6.5 None
SRR6046766 Other lineage3.1.1 None
SRR6046815 Other lineage3 None
SRR6046839 Other lineage4.9 None
ERR2886463 Sensitive lineage2.2.1 None
SRR6046852 MDR-TB lineage3 None
ERR485006 HR-TB lineage4.9 None
ERR323037 HR-TB lineage4 None
SRR6797518 Sensitive lineage1.1.2 None
SRR7131123 Other lineage4.8 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR7131287 Other lineage2.2.1.1 None
DRR188816 Sensitive lineage4.2.2 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR037234 Sensitive lineage4.9 None
ERR10796560 MDR-TB lineage4.9;lineage4.1 None
ERR1063855 Other lineage4 None
ERR10796558 Sensitive lineage4 None
ERR10796571 Other lineage4.9 None
ERR10796561 Other lineage4.3.2 None
ERR10796564 Other lineage4.3.3 None
ERR10796565 RR-TB lineage4.9 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796577 RR-TB lineage4.9 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796589 Other lineage4.9 None
ERR10796593 RR-TB lineage4 None
ERR10796592 Other lineage4 None
ERR10796595 Other lineage4.9 None
ERR10796597 Other lineage4 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796611 Other lineage4.9 None
ERR10796598 RR-TB lineage4.9 None
ERR10796620 Other lineage4.1.1 None
ERR10796629 Other lineage4 None
ERR10796627 Other lineage4 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796635 Other lineage4 None
ERR10796636 Other lineage4.1.2.1 None
ERR3439441 Other La1.8.1 None
ERR4769442 HR-TB lineage4 None
ERR3806588 Other lineage6 None
ERR473303 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4769444 HR-TB lineage4.9 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR6358951 HR-TB lineage4 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6359069 Other lineage4.9 None
ERR6359070 Other lineage4.9 None
ERR6359066 HR-TB lineage4 None
ERR9117704 Other lineage4.6 None
ERR6359074 HR-TB lineage4.9 None
ERR736831 HR-TB lineage4.9 None
ERR736837 Other lineage4.9 None
ERR9117788 Other lineage3 None
ERR9117759 Other lineage3 None
SRR10315556 Sensitive lineage2.2.1 None
ERR9117827 Other lineage1.2.2.2 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9786076 Sensitive lineage3 None
ERR9787336 Other lineage6 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR1173740 Other None
SRR1173281 RR-TB lineage3 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR11972427 Pre-XDR-TB lineage2.2.1 None
SRR1180252 Other lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR1181161 Other lineage4.9 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR13888750 Other La2 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002937 Other lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002951 Other lineage4.5 None
SRR18002976 Other lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003007 MDR-TB lineage4.5 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18213726 Other lineage3 None
SRR18213721 Other lineage4.8 None
SRR18213736 MDR-TB lineage3 None
SRR18909918 Other lineage2.2.1.1 None
SRR18911231 Sensitive lineage4.1.1.3 None