ERR978754
|
RR-TB
|
lineage4.8
|
None
|
ERR3797014
|
Other
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SAMEA3501070
|
RR-TB
|
lineage4.8
|
None
|
SAMEA3501046
|
RR-TB
|
lineage4.8
|
None
|
SRR9971046
|
MDR-TB
|
lineage4.8
|
None
|
ERR4819462
|
Sensitive
|
lineage4.9
|
None
|
ERR9786076
|
Sensitive
|
lineage3
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
SRR1181256
|
Other
|
lineage4.9
|
None
|
SRR16156804
|
Sensitive
|
lineage4.9
|
None
|
SRR11342693
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR867570
|
RR-TB
|
lineage4.9
|
None
|
SRR023487
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9
|
None
|
ERR4596944
|
MDR-TB
|
lineage3.1.1
|
None
|
SAMEA3501063
|
RR-TB
|
lineage4.8
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
ERR978750
|
RR-TB
|
lineage4.8
|
None
|
ERR4818710
|
Sensitive
|
lineage4.9
|
None
|
ERR978733
|
RR-TB
|
lineage4.8
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
ERR4818646
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR978761
|
Other
|
lineage4.8
|
None
|
ERR3283024
|
Other
|
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9
|
None
|
ERR4819357
|
Sensitive
|
lineage4.9
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
ERR3797044
|
Other
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9
|
None
|
SRR11342649
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4809333
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR4815121
|
HR-TB
|
lineage4.6.2.2
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
SRR1062919
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1735596
|
RR-TB
|
lineage4.9
|
None
|
SRR1172717
|
Sensitive
|
lineage4.9
|
None
|
ERR3797017
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR6982239
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR5153091
|
HR-TB
|
lineage4.3.3
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
ERR7801175
|
HR-TB
|
lineage4.6.5
|
None
|
SRR11342687
|
RR-TB
|
lineage4.2.2.2
|
None
|
ERR2693231
|
Other
|
La1.6;La3;lineage4.6.4;lineage4.9
|
None
|
ERR176741
|
Other
|
lineage4.9
|
None
|
SRR11342642
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2027257
|
Other
|
lineage4.1.2.1
|
None
|
ERR3275941
|
RR-TB
|
lineage4.3
|
nl
|
SRR10869071
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1184021
|
Sensitive
|
lineage4.9
|
None
|
ERR4815550
|
Other
|
lineage2.2;lineage4.9
|
None
|
ERR108125
|
RR-TB
|
lineage4.9
|
None
|
ERR2228838
|
Other
|
lineage4.8
|
None
|
ERR4769508
|
RR-TB
|
lineage4.9
|
None
|
ERR2229198
|
Sensitive
|
lineage4.8
|
None
|
ERR978750_ERR978752_ERR978751
|
RR-TB
|
lineage4.8
|
None
|
ERR2693254
|
Other
|
La1.6;La3;lineage4.9
|
None
|
SRR11342651
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR978755_ERR978756_ERR978754_ERR978757
|
RR-TB
|
lineage4.8
|
None
|
SRR11342660
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16156188
|
Sensitive
|
lineage4.9
|
None
|
SAMN02380990
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR2228890
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR4796472
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4819933
|
Sensitive
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
ERR2228815
|
Other
|
lineage4.8
|
None
|
ERR978760
|
RR-TB
|
lineage4.8
|
None
|
ERR867523
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR20969542
|
Other
|
lineage4.4.2
|
None
|
SRR18003047
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
ERR4769436
|
Other
|
La1.3
|
None
|
ERR11466014
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR2693230
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR6358951
|
Sensitive
|
lineage4.9
|
None
|
ERR2228900
|
Other
|
lineage4.8
|
None
|
SRR5007168
|
Other
|
lineage4.8.2;lineage4.9
|
None
|
SRR11342696
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR3445487
|
Other
|
La1.7.X-unk4
|
None
|
SRR1180446
|
Other
|
lineage4.9
|
None
|
SRR9971113
|
Other
|
lineage2.2.1
|
None
|
ERR9787153
|
Other
|
lineage6.1.3
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
ERR4815556
|
RR-TB
|
lineage3
|
None
|
ERR6359070
|
Sensitive
|
lineage4.9
|
None
|
SRR1735598
|
RR-TB
|
lineage4.9
|
None
|
SAMEA3501067
|
RR-TB
|
lineage4.8
|
None
|
SRR1049582
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4817069
|
RR-TB
|
|
None
|
ERR3275996
|
HR-TB
|
lineage4.3.4.1
|
nl
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
SRR1140724
|
Other
|
lineage2.2.1
|
None
|
SRR1181214
|
Other
|
lineage4.9
|
None
|
SRR6044952
|
Other
|
lineage4.9
|
None
|
SRR12708406
|
HR-TB
|
lineage2.2.1;lineage4.9
|
None
|
ERR2228810
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR1175513
|
Sensitive
|
lineage4.9
|
None
|
ERR323044
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR6045832
|
Other
|
lineage4.9
|
None
|
ERR10762275
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR1049674
|
HR-TB
|
lineage2.2.1
|
None
|
SRR11342662
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR1140712
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
ERR4808964
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1181403
|
Other
|
lineage4.9
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR10315558
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4816610
|
Other
|
lineage4.3.3
|
None
|
ERR4818624
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
ERR978694_ERR978693
|
Other
|
lineage4.8
|
None
|
SRR1180946
|
Sensitive
|
lineage2;lineage4.9
|
None
|
SRR22424765
|
HR-TB
|
lineage4.8
|
None
|
ERR2693245
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR978726
|
RR-TB
|
lineage4.8
|
None
|
ERR978756
|
Other
|
lineage4.8
|
None
|
SRR22175249
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR978752
|
Other
|
lineage4.8
|
None
|
SRR1184114
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR867567
|
RR-TB
|
lineage3
|
None
|
ERR978762
|
Other
|
lineage4.8
|
None
|
SAMEA3501065
|
RR-TB
|
lineage4.8
|
None
|
ERR1063855
|
Other
|
lineage4.9
|
None
|
SRR1062880
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR978693
|
Other
|
lineage4.8
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
SRR1184308
|
Sensitive
|
lineage4.9
|
None
|
ERR3283020
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1049581
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR11342636
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3283032
|
Other
|
lineage4.9
|
None
|
SRR1196545
|
Sensitive
|
lineage4.9
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
SRR1180977
|
Sensitive
|
lineage4.9
|
None
|
ERR323037
|
Other
|
lineage4.9
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
SRR11342644
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR978734_ERR978733_ERR978735
|
RR-TB
|
lineage4.8
|
None
|
ERR978746
|
RR-TB
|
lineage4.8
|
None
|
ERR978735
|
Other
|
lineage4.8
|
None
|
SRR9971080
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4819864
|
RR-TB
|
lineage1.1.3.1
|
None
|
ERR1023502
|
MDR-TB
|
lineage2;lineage4
|
None
|
SRR1238558
|
Other
|
lineage4.9
|
None
|
SRR1181390
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR5979454
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR473334
|
HR-TB
|
lineage4.9
|
None
|
ERR736831
|
Other
|
lineage4.9
|
None
|
SAMEA3501052
|
RR-TB
|
lineage4.8
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
SRR7070157
|
Other
|
lineage4.1.1.3.1
|
None
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
ERR4818851
|
RR-TB
|
lineage4.4.1.1
|
None
|
ERR4769550
|
Sensitive
|
La1;lineage4.9
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
ERR4769530
|
RR-TB
|
lineage4.9
|
None
|
SRR6046385
|
Sensitive
|
lineage4.9
|
None
|
SRR6046141
|
Other
|
lineage4.9
|
None
|
ERR4815310
|
Other
|
lineage2.2.1;lineage4.9
|
None
|
ERR4815471
|
Sensitive
|
lineage4.9
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
SRR16149126
|
MDR-TB
|
lineage4.2.2.1
|
None
|
SRR1049675
|
HR-TB
|
lineage2.2.1
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
SRR5007161
|
RR-TB
|
lineage4.1.1.3.1;lineage4.9
|
None
|
ERR978746_ERR978747_ERR978748
|
RR-TB
|
lineage4.8
|
None
|
ERR2693257
|
Other
|
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9
|
None
|
SRR1181215
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
SRR1180440
|
Other
|
lineage4.9
|
None
|
ERR4821143
|
Other
|
lineage4.9
|
None
|
SRR1238559
|
Other
|
lineage4.9
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
SRR14801325
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
ERR751345
|
Other
|
lineage5.1.1
|
None
|
ERR4769554
|
RR-TB
|
lineage4.9
|
None
|
ERR7801176
|
RR-TB
|
lineage4.6.5
|
None
|
ERR4821119
|
Other
|
lineage4.4.1.1
|
None
|
SRR18909918
|
Other
|
lineage2.2.1.1
|
None
|
SAMEA3501015
|
Other
|
lineage4.8
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR736837
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR3797061
|
Other
|
La1.6;La3;lineage4.9
|
None
|
ERR978761_ERR978762_ERR978760
|
RR-TB
|
lineage4.8
|
None
|
SRR9971150
|
RR-TB
|
lineage4.8.1
|
None
|
ERR4596904
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR6359066
|
HR-TB
|
lineage4.9
|
None
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
ERR4816964
|
Sensitive
|
lineage4.9
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
SRR1180148
|
Sensitive
|
lineage4.9
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
SRR1173515
|
Sensitive
|
lineage4.9
|
None
|
ERR4821704
|
Other
|
lineage4.3.3
|
None
|
ERR4816548
|
HR-TB
|
lineage4.5
|
None
|
ERR4821811
|
Sensitive
|
lineage4.9
|
None
|
ERR6359069
|
Sensitive
|
lineage4.9
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16157123
|
Other
|
lineage4.9
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
ERR4815816
|
Other
|
lineage4.5
|
gb
|
ERR4812763
|
Other
|
lineage2.2.1
|
None
|
ERR485006
|
HR-TB
|
lineage4.9
|
None
|
ERR3283044
|
Other
|
lineage4
|
None
|
ERR867541
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR11342634
|
MDR-TB
|
lineage4.8
|
None
|
SRR9971065
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
SRR11342647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR11488822
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.1.2.1
|
None
|
SRR3675234
|
Other
|
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR2229147
|
Other
|
lineage4.8
|
None
|
ERR978726_ERR978727
|
RR-TB
|
lineage4.8
|
None
|