Rv0668 - c.168C>G
Drug resistance types
46 Sensitive
41 RR-TB
33 HR-TB
24 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
56 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 73 |
| lineage4.3.4.2.1 | 3 |
| lineage2.2.1 | 17 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4.3.3 | 5 |
| lineage4.2.1 | 3 |
| La1.7.X-unk4 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage4.8 | 33 |
| lineage6.1.3 | 1 |
| lineage4.6.1.2 | 4 |
| lineage2.2.1;lineage4.9 | 4 |
| lineage2;lineage4 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| lineage3 | 4 |
| lineage4.6.5 | 2 |
| lineage4.2.2.2 | 1 |
| La1.6;La3;lineage4.9 | 2 |
| lineage4.1.2.1 | 3 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage3.1.1 | 2 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.2.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage5.1.1 | 1 |
| La1;lineage4.9 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.4.1.1.1 | 4 |
| lineage2.2.1.1 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4 | 2 |
| lineage4.3.4.1 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.8.1 | 3 |
| lineage4.4.2 | 1 |
| lineage4.5 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| 1 | |
| lineage4.6.2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3 | 1 |
| lineage2.2;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| La1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 209 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180250 | Other | lineage4.9 | None | ERR11466014 | Sensitive | lineage4.3.4.2.1 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4821704 | Other | lineage4.3.3 | None | SRR1184308 | RR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR978746 | RR-TB | lineage4.8 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR978761 | Other | lineage4.8 | None | SRR1180410 | Sensitive | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR108125 | RR-TB | lineage4.9 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4821143 | Other | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR9786076 | Other | lineage3 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4815556 | RR-TB | lineage3 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR6045832 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | ERR978726 | RR-TB | lineage4.8 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SAMEA3501015 | Other | lineage4.8 | None | SRR1238559 | Other | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR16149126 | MDR-TB | lineage4.2.2.1 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR4821811 | Sensitive | lineage4.9 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR3283032 | Other | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR2228890 | Other | lineage4.8;lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR2228900 | Other | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | ERR978752 | Other | lineage4.8 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR2229147 | Other | lineage4.8 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR978754 | RR-TB | lineage4.8 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR6044952 | Other | lineage4.9 | None | ERR978733 | RR-TB | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR978756 | Other | lineage4.8 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR4816964 | HR-TB | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR2228810 | Other | lineage4.8;lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR176741 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR3283044 | Other | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR10869071 | MDR-TB | lineage2.2.1 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR2228838 | Other | lineage4.8 | None | ERR978762 | Other | lineage4.8 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR1238558 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR978760 | RR-TB | lineage4.8 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | ERR4817069 | RR-TB | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR1735596 | RR-TB | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR978735 | Other | lineage4.8 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR1063855 | Other | lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1181349 | Sensitive | lineage4 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4815816 | Other | lineage4.5 | gb | ERR4812763 | Other | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR978693 | Other | lineage4.8 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR4815471 | HR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None |
|---|
