Rv0667 - c.1282_1283delAGinsTC
Drug resistance types
33 Sensitive
76 RR-TB
11 HR-TB
23 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2 | 2 |
| lineage4 | 7 |
| lineage4.9 | 58 |
| lineage4.1.2.1 | 6 |
| lineage4.4.1.1 | 4 |
| lineage2.2.1 | 12 |
| lineage4.8 | 15 |
| lineage4.3.2.1 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage2 | 1 |
| lineage3 | 14 |
| lineage4.4 | 1 |
| lineage4.3.3 | 4 |
| lineage4.4.2 | 1 |
| lineage2.2.2 | 1 |
| lineage1.2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.2.1 | 4 |
| lineage4.1 | 1 |
| lineage5 | 1 |
| 7 | |
| lineage1.2.1.1 | 1 |
| lineage4.7 | 2 |
| lineage3.1.2.1 | 3 |
| lineage4.1.1.3 | 3 |
| lineage4.1.1 | 1 |
| lineage6 | 1 |
| lineage1 | 1 |
| lineage4.8.2 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage1.1.3.1 | 3 |
| lineage3.1.1 | 1 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.3.1 | 1 |
| lineage4.3 | 1 |
| lineage5.1.1 | 1 |
| La1.8.1 | 4 |
| lineage4.8.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.4.1.2 | 1 |
| La1.3 | 6 |
| lineage4.9;La1.3 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 187 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR1172717 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR16134492 | RR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR18572454 | RR-TB | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4814623 | Other | lineage4.8 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR4815394 | RR-TB | lineage4.2.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814841 | Other | lineage4.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815910 | Other | lineage4.1.2.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816982 | Other | lineage4 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816183 | Other | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4817189 | Other | lineage4.7 | None | ERR4817069 | RR-TB | None | ERR4817131 | Pre-XDR-TB | None | ERR4817367 | Sensitive | lineage4.9 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816756 | RR-TB | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2512606 | MDR-TB | lineage3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2513223 | Other | lineage4.1.2.1 | None | ERR4818393 | RR-TB | lineage3 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4818948 | Sensitive | lineage4.3.3 | gb | SRR5007165 | MDR-TB | lineage3 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4820324 | Other | lineage4 | None | ERR4819456 | Other | lineage4.8 | None | ERR4819528 | RR-TB | lineage3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR2514514 | RR-TB | lineage3 | gb | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4820833 | HR-TB | None | ERR4820151 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821214 | RR-TB | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821331 | HR-TB | lineage4.8 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821712 | HR-TB | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6045312 | Other | lineage1.1.3.3 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | ERR4828879 | MDR-TB | lineage3 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7585435 | Other | lineage4.9 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7645928 | RR-TB | lineage4.7 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283043 | Other | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR4187604 | RR-TB | La1.8.1 | None | ERR4769408 | Other | La1.3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None |
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