Rv0667 - c.1282_1283delAGinsTC
Drug resistance types
35 Sensitive
58 RR-TB
10 HR-TB
23 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 28 |
| lineage3.1.2.1 | 2 |
| lineage2.2.1 | 12 |
| lineage4.1.1.3 | 4 |
| lineage4.9 | 42 |
| lineage4.4.1.1.1 | 4 |
| lineage3;lineage4 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.4 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.4.2 | 2 |
| La1.8.1 | 2 |
| lineage4.7 | 1 |
| La1.3 | 1 |
| lineage5 | 1 |
| lineage3.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.3.2.1 | 4 |
| lineage4.8.1 | 3 |
| lineage1.2.1.1 | 1 |
| lineage4.3.3 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.1 | 3 |
| lineage4.1.2 | 2 |
| lineage4 | 1 |
| lineage3 | 3 |
| lineage1.1.3.1 | 1 |
| lineage2.2.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.1 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage4.4.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.3 | 1 |
| lineage4.8.2 | 1 |
| lineage4.2.1 | 2 |
| lineage2;lineage4.9 | 1 |
| lineage4.9.1 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 147 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4820151 | Other | lineage4.8 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR5311077 | Other | La1.8.1 | None | ERR4817189 | Other | lineage4.7 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4769436 | Other | La1.3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR1180250 | Other | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR4816967 | Other | lineage5 | None | SRR18572454 | RR-TB | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR3468488 | Other | La1.8.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1181402 | Sensitive | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR978726 | RR-TB | lineage4.8 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR4818259 | RR-TB | lineage4.1.1.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR4819305 | Sensitive | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR978760 | RR-TB | lineage4.8 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | ERR4815556 | RR-TB | lineage3 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR736831 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR978734 | RR-TB | lineage4.8 | None | ERR978750 | RR-TB | lineage4.8 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR4821222 | Other | lineage4.3.2.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | ERR4817069 | RR-TB | None |
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