lineage | Count |
---|---|
lineage4.3.4.2.1 | 1 |
lineage1.2.2 | 1 |
lineage4 | 4 |
lineage4.4.2 | 1 |
lineage3 | 11 |
lineage3.1.2 | 1 |
lineage1.1.3.1 | 2 |
lineage4.8 | 5 |
lineage2.2.1 | 4 |
lineage4.1 | 2 |
lineage2.2.1.1 | 1 |
lineage2.2 | 1 |
La1.8.2 | 1 |
lineage4.9 | 8 |
lineage3.1 | 1 |
lineage4.3.3 | 2 |
5 | |
lineage4.6.1.2 | 1 |
lineage4.1.2 | 1 |
lineage4.2.1.1 | 1 |
lineage1 | 1 |
lineage6 | 1 |
lineage4.5 | 1 |
lineage4.1.2.1 | 5 |
lineage4.1.1 | 1 |
lineage4.3.2 | 1 |
lineage4.1.1.3.1 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.4.1.1 | 2 |
lineage4.3.4.1 | 1 |
lineage3.1.1 | 1 |
lineage4.6.2.2 | 1 |
lineage4.7 | 1 |
lineage4.1.4 | 1 |
spoligotype | Count |
---|---|
None | 73 |
ID | Drug resistance | Lineage | Country iso2 | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4814312 | Other | lineage4 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4814714 | Other | lineage3 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814748 | Other | lineage4.8 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4815909 | Other | lineage4.8 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815901 | Other | lineage2.2 | None | ERR4816133 | Other | La1.8.2 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4817478 | Other | lineage3 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR4817060 | RR-TB | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816756 | RR-TB | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4818274 | Other | lineage4 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818407 | Other | lineage4.3.2 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819224 | Other | lineage1.2.1.2.1 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4820324 | Other | lineage4 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819456 | Other | lineage4.8 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820397 | Other | lineage4.9 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4819765 | Other | lineage4.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4820833 | HR-TB | None | ERR4822104 | RR-TB | lineage3 | None | ERR4820107 | RR-TB | None | ERR4821214 | RR-TB | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR6046359 | Other | lineage4.7 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR6046815 | Other | lineage3 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR9901813 | RR-TB | lineage4.1.4 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None |
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