lineage | Count |
---|---|
lineage1.1.2 | 1 |
lineage4.2.1.1 | 1 |
lineage4.9 | 7 |
lineage3.1.1 | 1 |
lineage4.4.1.1 | 1 |
lineage3 | 1 |
lineage4.1.1.3.1 | 2 |
lineage4;lineage3 | 1 |
lineage2.2.1 | 5 |
lineage4.3.3 | 1 |
lineage4.8.2 | 1 |
lineage4 | 1 |
La1.7.X-unk4 | 1 |
La1.2 | 1 |
lineage4.1.2.1 | 1 |
La1.4 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 28 |
ID | Drug resistance | Lineage | Country iso2 | ERR4814874 | MDR-TB | lineage1.1.2 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4817464 | Other | lineage3.1.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR6045267 | RR-TB | lineage4 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR4769418 | Other | La1.2 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR9891966 | Sensitive | lineage4.1.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None |
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