lineage | Count |
---|---|
lineage4.9 | 14 |
lineage4.9;lineage4.1 | 1 |
lineage4.3.3 | 2 |
lineage4.3.4 | 1 |
lineage4.9;La1.3 | 1 |
lineage2.2.1 | 5 |
lineage3.1.2 | 1 |
lineage3 | 4 |
3 | |
lineage4.2.1 | 1 |
lineage4.4 | 1 |
lineage2.2.2 | 1 |
lineage2.2.1.1 | 1 |
lineage4.8 | 6 |
lineage4.1 | 1 |
lineage4 | 3 |
lineage4.1.2.1 | 2 |
La1.8.2 | 1 |
lineage3.1 | 1 |
lineage1.2.1.2.1 | 1 |
lineage3.1.2.1 | 1 |
lineage4.1.1.3.1 | 3 |
lineage4;lineage3 | 1 |
lineage4.4.1.1 | 1 |
lineage4.8.2 | 1 |
lineage4.7 | 1 |
lineage5.1.1 | 1 |
spoligotype | Count |
---|---|
None | 60 |
ID | Drug resistance | Lineage | Country iso2 | ERR3283006 | RR-TB | lineage4.9 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR6197040 | Other | lineage4.9 | None | ERR9117714 | Other | lineage3.1.2 | None | SRR1173719 | HR-TB | lineage3 | None | SRR16156832 | RR-TB | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815310 | Other | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR3675552 | RR-TB | lineage4.9 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814841 | Other | lineage4.1 | None | ERR4815550 | Other | lineage4 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4815079 | RR-TB | lineage3 | None | ERR4816133 | Other | La1.8.2 | None | ERR2027290 | RR-TB | lineage3.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4817010 | HR-TB | lineage1.2.1.2.1 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR2229442 | HR-TB | lineage4.8 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4816852 | Other | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4820107 | RR-TB | None | ERR4820324 | Other | lineage4 | None | ERR4820666 | Other | lineage4.8 | gb | SRR6045267 | RR-TB | lineage4 | None | ERR4821288 | Other | lineage4.7 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045957 | Other | lineage4.9 | None | ERR4821286 | Other | lineage4.8 | None | SRR6896545 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502517 | MDR-TB | lineage5.1.1 | None |
---|