Rv0668 - c.1344G>C


Drug resistance types
19 Sensitive 40 RR-TB 33 HR-TB 23 MDR-TB 15 Pre-XDR-TB 0 XDR-TB 48 Other
lineage Counts
lineage Count
lineage4.9 31
lineage4.8 13
lineage4.1.1.3 2
lineage5.1.1 1
lineage4.3.4.1 2
lineage4.1.2.1 11
24
lineage2.2.1 11
lineage4.3.3 2
lineage4.4.1.1 1
lineage4.3.2 1
La1 1
lineage4.9;La1.3 1
La1.8.1 1
lineage4.5;lineage2.2.1 1
lineage1.1.3.3 1
lineage2.2.1.2 1
lineage3 13
lineage4.7 2
lineage4.3.4 1
lineage4 14
lineage4.4.1.1;lineage4.1.2.1 1
lineage4.3.2.1 1
lineage1.1.2 11
lineage3.1.1 4
lineage2.2.1.1 1
lineage4.6.2.2 4
lineage4.4.2 1
lineage1.1.3.1 2
lineage4.1 2
lineage1.1 1
lineage5 1
lineage3.1.2.1 1
lineage1 1
lineage4.1.1 1
lineage4.1.1.3.1 3
lineage1.2.2.2 2
lineage1.2.1.2.1 1
lineage4.3.4.2 1
lineage4.9;lineage4.2.1 1
lineage4.2.1 1
lineage4.2.2.2 1
lineage4.3.4.2.1 1
spoligotype Counts
spoligotype Count
None 178
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR502479 RR-TB lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
SRR9971122 MDR-TB lineage4.8 None
ERR502481 Pre-XDR-TB lineage4.9 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR323035 Sensitive lineage4.9 None
ERR502517 MDR-TB lineage5.1.1 None
ERR3275996 HR-TB lineage4.3.4.1 nl
SRR9613550 HR-TB lineage4.1.2.1 None
SRR7535080 HR-TB lineage4.8 None
ERR323045 HR-TB None
ERR1063859 HR-TB None
ERR1023502 MDR-TB lineage2.2.1 None
ERR036207 Other lineage4.9 None
ERR3283008 Other lineage4.9 None
ERR10796564 Other lineage4.3.3 None
ERR10796625 RR-TB lineage4.4.1.1 None
ERR10796561 Other lineage4.3.2 None
ERR10796565 RR-TB lineage4.9 None
ERR10796630 HR-TB None
ERR3445503 HR-TB None
ERR3445504 HR-TB None
ERR3283043 Other lineage4.9 None
ERR3468561 HR-TB lineage4.9 None
ERR369151 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4798262 HR-TB La1 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4188213 HR-TB La1.8.1 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR4798769 Other lineage1.1.3.3 None
ERR4799025 Pre-XDR-TB None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR702404 HR-TB None
ERR5979407 Other lineage3 None
ERR987707 MDR-TB lineage4.7 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR736817 HR-TB lineage4.3.4 None
ERR736875 HR-TB lineage4 None
SRR1140736 RR-TB None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1062928 RR-TB lineage4 None
SRR10808399 Sensitive lineage4 None
SRR10808668 Sensitive lineage2.2.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR1172848 MDR-TB lineage1.1.2 None
SRR1169473 Sensitive lineage1.1.2 None
SRR1169591 Sensitive lineage1.1.2 None
SRR1172086 Sensitive lineage1.1.2 None
SRR1172807 Sensitive lineage4.9 None
SRR1173014 MDR-TB lineage3 None
SRR1172873 MDR-TB lineage1.1.2 None
SRR1172938 MDR-TB lineage3 None
SRR1173013 Sensitive lineage1.1.2 None
SRR14782405 HR-TB None
SRR1173055 MDR-TB lineage2.2.1 None
SRR1173656 Sensitive lineage1.1.2 None
SRR1173727 MDR-TB lineage3 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR19303820 RR-TB lineage4.8 None
SRR1735596 RR-TB lineage4.9 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18572454 RR-TB lineage4.9 None
SRR18572456 Sensitive lineage4.9 None
SRR18002945 RR-TB lineage2.2.1 None
ERR4814896 Other lineage2.2.1.1 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR4815121 HR-TB lineage4.6.2.2 None
SAMN02599090 MDR-TB lineage3 None
ERR176778 HR-TB None
ERR4815301 Other lineage4.4.2 None
ERR4814312 Other lineage4 None
ERR4815310 Other None
ERR4814617 Other lineage1.1.3.1 None
ERR4814623 Other lineage4.8 None
ERR4814841 Other lineage4.1 None
ERR176779 HR-TB None
SAMN02599094 Sensitive lineage1.1.2 None
SRR3105762 HR-TB None
ERR4814763 Other lineage2.2.1 None
ERR4814767 MDR-TB lineage2.2.1 None
ERR4815502 Other lineage4.1 None
ERR4813263 MDR-TB lineage4.8 None
ERR4815550 Other lineage4 None
ERR176651 HR-TB None
SRR3675312 HR-TB lineage4 None
ERR181887 HR-TB None
ERR4816127 Sensitive lineage1.1 None
SRR3675510 Other None
ERR4815909 Other lineage4.8 None
ERR4815923 Sensitive lineage4.8 None
ERR4817464 Other lineage3.1.1 None
ERR4816967 RR-TB lineage5 None
ERR4817131 Pre-XDR-TB None
SRR3675552 RR-TB lineage4.9 None
ERR4816232 Other lineage4 None
ERR212125 HR-TB lineage4 None
ERR4817976 HR-TB lineage4.1.2.1 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4816656 HR-TB None
ERR4817189 Other lineage4.7 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR2229791 RR-TB lineage4.9 None
SAMN02599089 MDR-TB lineage3 None
ERR4818050 Other lineage4.6.2.2 None
SAMN02599179 MDR-TB lineage1.1.2 None
ERR4818785 RR-TB lineage4.1.2.1 None
ERR4818929 HR-TB None
ERR4818110 Sensitive lineage4.9 None
ERR4818126 RR-TB lineage1 None
ERR4818128 RR-TB lineage4.1.2.1 None
ERR4818259 RR-TB lineage4.1.1 None
ERR4818261 Other lineage1.1.2 None
ERR4819051 Other lineage4 None
ERR4818904 Other lineage4.8 None
ERR4818507 RR-TB lineage4.1.2.1 None
ERR4818522 Pre-XDR-TB lineage3 None
ERR4818536 Other lineage4.9 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007168 RR-TB lineage4.9 None
SRR5007170 RR-TB lineage4.9 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4817584 MDR-TB lineage3 None
SRR5341456 Other None
ERR4818977 RR-TB lineage4.1.2.1 None
ERR4819217 Other lineage1.2.2.2 None
ERR4819307 RR-TB lineage4 None
ERR4820324 Other lineage4 None
ERR2514351 Sensitive lineage3 gb
ERR2514137 Pre-XDR-TB lineage2.2.1 None
ERR4819462 Other lineage4 None
ERR2514181 Other lineage1.2.1.2.1 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819640 RR-TB lineage4.6.2.2 None
ERR4820784 Sensitive lineage4.9 None
ERR4819655 Other lineage4.8 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4819784 Other lineage4.1.2.1 None
SAMN02599061 MDR-TB lineage3 None
ERR4819772 RR-TB lineage1.1.3.1 None
ERR4819863 RR-TB lineage4.9 None
ERR4821007 RR-TB lineage1.2.2.2 None
ERR4820586 Other lineage3 gb
ERR4820833 HR-TB None
ERR4820151 RR-TB lineage4.8 None
ERR2515032 Other lineage3 None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
SRR6046117 RR-TB lineage4.9 None
ERR4821286 Other lineage4.8 None
ERR4821981 Other lineage4.1.2.1 None
ERR4821409 Other lineage4.8 None
ERR4821214 RR-TB None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045664 Other lineage4.2.1 None
SRR6045267 RR-TB lineage4 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6045957 Other lineage4.9 None
SRR6044983 Other lineage3.1.1 None
SRR6045010 Other lineage4 None
SRR6044780 Other lineage4.9 None
SRR6046299 HR-TB None
SRR6045424 Other lineage1.1.2 None
SRR6046250 Other lineage4.9 None
SRR6046397 Other None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046611 HR-TB lineage4.9 None
SRR6046815 Other lineage3 None