Rv0668 - c.1344G>C
Drug resistance types
19 Sensitive
40 RR-TB
33 HR-TB
23 MDR-TB
15 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 31 |
| lineage4.8 | 13 |
| lineage4.1.1.3 | 2 |
| lineage5.1.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.1.2.1 | 11 |
| 24 | |
| lineage2.2.1 | 11 |
| lineage4.3.3 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.3.2 | 1 |
| La1 | 1 |
| lineage4.9;La1.3 | 1 |
| La1.8.1 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage1.1.3.3 | 1 |
| lineage2.2.1.2 | 1 |
| lineage3 | 13 |
| lineage4.7 | 2 |
| lineage4.3.4 | 1 |
| lineage4 | 14 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage1.1.2 | 11 |
| lineage3.1.1 | 4 |
| lineage2.2.1.1 | 1 |
| lineage4.6.2.2 | 4 |
| lineage4.4.2 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4.1 | 2 |
| lineage1.1 | 1 |
| lineage5 | 1 |
| lineage3.1.2.1 | 1 |
| lineage1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage1.2.2.2 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 178 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR502479 | RR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR323035 | Sensitive | lineage4.9 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR7535080 | HR-TB | lineage4.8 | None | ERR323045 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR036207 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796630 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3468561 | HR-TB | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4798262 | HR-TB | La1 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR702404 | HR-TB | None | ERR5979407 | Other | lineage3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | SRR1140736 | RR-TB | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1172848 | MDR-TB | lineage1.1.2 | None | SRR1169473 | Sensitive | lineage1.1.2 | None | SRR1169591 | Sensitive | lineage1.1.2 | None | SRR1172086 | Sensitive | lineage1.1.2 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR1172873 | MDR-TB | lineage1.1.2 | None | SRR1172938 | MDR-TB | lineage3 | None | SRR1173013 | Sensitive | lineage1.1.2 | None | SRR14782405 | HR-TB | None | SRR1173055 | MDR-TB | lineage2.2.1 | None | SRR1173656 | Sensitive | lineage1.1.2 | None | SRR1173727 | MDR-TB | lineage3 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18572454 | RR-TB | lineage4.9 | None | SRR18572456 | Sensitive | lineage4.9 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SAMN02599090 | MDR-TB | lineage3 | None | ERR176778 | HR-TB | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4814312 | Other | lineage4 | None | ERR4815310 | Other | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814623 | Other | lineage4.8 | None | ERR4814841 | Other | lineage4.1 | None | ERR176779 | HR-TB | None | SAMN02599094 | Sensitive | lineage1.1.2 | None | SRR3105762 | HR-TB | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814767 | MDR-TB | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4815550 | Other | lineage4 | None | ERR176651 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | ERR4816127 | Sensitive | lineage1.1 | None | SRR3675510 | Other | None | ERR4815909 | Other | lineage4.8 | None | ERR4815923 | Sensitive | lineage4.8 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4817131 | Pre-XDR-TB | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816232 | Other | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | ERR4817976 | HR-TB | lineage4.1.2.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816656 | HR-TB | None | ERR4817189 | Other | lineage4.7 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | SAMN02599089 | MDR-TB | lineage3 | None | ERR4818050 | Other | lineage4.6.2.2 | None | SAMN02599179 | MDR-TB | lineage1.1.2 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818929 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR4819051 | Other | lineage4 | None | ERR4818904 | Other | lineage4.8 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818536 | Other | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5341456 | Other | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4820324 | Other | lineage4 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819462 | Other | lineage4 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4820784 | Sensitive | lineage4.9 | None | ERR4819655 | Other | lineage4.8 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819784 | Other | lineage4.1.2.1 | None | SAMN02599061 | MDR-TB | lineage3 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | ERR4820586 | Other | lineage3 | gb | ERR4820833 | HR-TB | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR2515032 | Other | lineage3 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821409 | Other | lineage4.8 | None | ERR4821214 | RR-TB | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045010 | Other | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046397 | Other | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046815 | Other | lineage3 | None |
|---|
