EBG00000313339 - n.545T>C


Drug resistance types
16 Sensitive 34 RR-TB 19 HR-TB 34 MDR-TB 14 Pre-XDR-TB 0 XDR-TB 81 Other
lineage Counts
lineage Count
lineage4.9 52
lineage2.2.1 24
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.1.1.3 2
lineage4.1.2.1;lineage4.9 1
lineage4.2.1 8
lineage4.1.2.1 7
lineage3.1.1 2
lineage4.8 12
lineage4.3.4.2.1 9
lineage4.3.3 8
lineage2.2.1;lineage4.9 1
La1.7.1 1
lineage4.7 2
lineage2.2 1
lineage1.2.1.1 2
lineage2.2.2 3
lineage4.3.4.2 3
lineage4.6.1.1 2
lineage4.1.1.1 5
lineage4.3 1
La2;lineage4.9 1
lineage1;lineage4.9 1
lineage3 5
lineage4.4 1
La3;lineage4.3.4 1
lineage4.3.4.1;lineage4.9 1
lineage4.4.1.1 2
La1.8.1 1
lineage4.3.4.2;lineage4.9 1
lineage4.4.1.2 1
La1.7.X-unk4 1
lineage3;lineage4 1
lineage1.2.2.1 1
lineage4.1;lineage4.9 1
lineage2.2.1.1 1
lineage4.9;lineage7 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage4.8.1 1
lineage4.4.2 2
lineage4.6.2.2 1
lineage4.3.4 1
lineage4.3.4.1 3
La3;lineage4.9 2
lineage3.1.3 1
La1.7.1;lineage4.9 1
lineage3.1.1;lineage4.9 1
lineage4.4.1.1.1 1
lineage4.9.1 1
lineage4.3.2.1 1
1
lineage4.1.3 2
lineage4.1.2.1;lineage4.4.1 1
La2;lineage2.2 1
lineage4 1
lineage4.2.2.2 4
lineage2.2;lineage4 1
lineage4.3.3;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
spoligotype Counts
spoligotype Count
None 198
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR212138 HR-TB lineage4.9 None
SRR18003049 Other lineage2.2.1 None
ERR3797062 RR-TB lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR16156697 RR-TB lineage2.2.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
ERR867571 Other lineage4.9 None
SRR7645972 MDR-TB lineage4.2.1 None
ERR867573 Other lineage4.9 None
ERR10796566 Other lineage4.9 None
ERR4819863 RR-TB lineage4.9 None
ERR10796636 Other lineage4.1.2.1 None
SRR7070134 Other lineage3.1.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR18003045 Other lineage2.2.1 None
ERR10796597 Other lineage4.3.3 None
SRR1173310 Other lineage3.1.1 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
ERR4818904 Other lineage4.8 None
ERR1815538 Other La1.7.1 None
SRR7645928 Other lineage4.7 None
ERR176651 Other lineage4.9 None
SRR18002874 MDR-TB lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR10219876 Other lineage4.3.4.2 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR502481 RR-TB lineage4.9 None
SRR18002974 Other lineage2.2.1 None
ERR10796640 Other lineage4.1.2.1 None
ERR10796628 Other lineage4.3.3 None
SRR1173834 Other lineage4.6.1.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR7131123 Other lineage4.8 None
ERR4821172 RR-TB lineage4.9 None
SRR7645899 Other lineage2.2.1 None
ERR867569 Other lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR3275941 RR-TB lineage4.3 nl
SRR18002963 Other lineage2.2.1 None
ERR108125 RR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR7131121 Other lineage4.3.3 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
SRR7645927 Other lineage4.8 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR867567 RR-TB lineage3 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR16627752 RR-TB lineage4.4 None
ERR4769521 RR-TB lineage4.9 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
SRR19304104 Other lineage4.8 None
SRR6982141 Other lineage4.3.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR867572 Other lineage4.9 None
SRR18003046 MDR-TB lineage2.2.1 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR4820030 Other lineage4.9 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
ERR176779 HR-TB lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR4821272 RR-TB lineage4.1.2.1 None
SRR11342698 RR-TB lineage4.4.1.1 None
ERR5311077 Other La1.8.1 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
ERR10796631 Other lineage4.3.4.2;lineage4.9 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3797047 MDR-TB lineage4.9 None
ERR3445487 Other La1.7.X-unk4 None
SRR1173740 Other lineage3;lineage4 None
ERR11465300 Sensitive lineage4.3.4.2.1 None
ERR245662 Sensitive lineage1.2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR7645971 Other lineage2.2.1 None
ERR10796635 Other lineage4.8 None
SRR11342646 HR-TB lineage3 None
ERR181824 HR-TB lineage4.9 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR10796629 Other lineage4.1;lineage4.9 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR19303907 Other lineage4.8 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR6044952 Other lineage4.9 None
SRR7646018 MDR-TB lineage4.2.1 None
ERR867570 RR-TB lineage4.9 None
SRR1140736 Other lineage4.1.2.1 None
ERR1063858 HR-TB lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
ERR502472 Sensitive lineage4.6.2.2 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR7645906 Other lineage2.2.1 None
ERR736817 HR-TB lineage4.3.4 None
SRR19303820 RR-TB lineage4.8 None
SRR21727760 Other lineage2.2.1 None
SRR1173719 Other lineage4.9 None
ERR4769554 RR-TB lineage4.9 None
SRR11342669 Other lineage4.8 None
ERR10796626 Other lineage4.1.2.1 None
ERR10796571 Other lineage4.9 None
ERR10796589 Other lineage4.9 None
SRR6046497 Sensitive lineage4.9 None
ERR10796620 Other lineage4.1.1.1 None
ERR10796620 Other lineage4.1.1.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR11342691 MDR-TB lineage2.2.1 None
ERR181887 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR11465152 Sensitive lineage4.3.4.1 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR161037 Other lineage4.9 None
ERR2027220 Sensitive lineage3.1.3 None
SRR3675582 Other lineage4.9 None
ERR11465279 Sensitive lineage4.3.4.1 None
ERR11465301 Other lineage4.3.4.2.1 None
ERR867541 MDR-TB lineage4.2.1 None
ERR867541 MDR-TB lineage4.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR171142 Other lineage3.1.1;lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR9786346 Sensitive lineage4.3.4.2 None
SAMN02567682 Other lineage4.6.1.1 ug
ERR502470 RR-TB lineage4.9 None
ERR502470 RR-TB lineage4.9 None
ERR037504 Other lineage4.9.1 None
ERR212125 HR-TB lineage4.9 None
ERR10796598 Other lineage4.9 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
ERR3283006 RR-TB lineage4.9 None
SRR9971168 Other lineage4.3.2.1 None
SRR1062918 Other lineage3 None
SRR6046087 Sensitive lineage4.9 None
ERR4817069 RR-TB None
SRR11349207 RR-TB lineage2.2.1 None
SRR10808730 Other lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR1173281 Other lineage3 None
ERR176778 HR-TB lineage4.9 None
SRR11342671 RR-TB lineage4.1.3 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR17567917 RR-TB lineage4.4.1.1 None
ERR736875 HR-TB lineage4.9 None
SRR18002981 Other lineage2.2.1 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR10796591 Other lineage4.9 None
SRR14782539 MDR-TB lineage4.2.1 None
ERR10796560 Other lineage4.9 None
SRR1209015 Sensitive lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR7755657 Other lineage4.8 None
SRR22048536 Other lineage4.3.3 None
SRR11342640 MDR-TB lineage4.3.3 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003042 Other lineage2.2.1 None
ERR502474 RR-TB lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675265 Other lineage4 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR10796634 Other lineage4.7 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR867538 Other lineage4.2.2.2 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR10796618 Other lineage4.3.4.1 None
SRR11342686 MDR-TB lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR212123 Other lineage4.9 None
ERR10796615 Other lineage4.3.3;lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR502479 RR-TB lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR7645901 MDR-TB lineage2.2.1 None
ERR4816198 Sensitive lineage4.1.3 None
ERR502473 RR-TB lineage4.9 None
SRR11342688 Other lineage4.2.2.2 None
ERR1063862 HR-TB lineage4.9 None
SRR3675509 Other lineage4.9 None