EBG00000313339 - n.2212C>A


Drug resistance types
18 Sensitive 52 RR-TB 15 HR-TB 62 MDR-TB 29 Pre-XDR-TB 0 XDR-TB 223 Other
lineage Counts
lineage Count
lineage2.2.1 73
lineage2.2.2 7
lineage4.3 2
lineage4.8.1 3
lineage4.7 3
lineage3 21
lineage4.1.1.3.1 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.9 41
lineage4.1.3 1
La1.8.1 5
lineage4.8 74
La1.7.1 1
lineage4.3.4.2.1 2
lineage4.1.1.1 4
lineage2.2.1;lineage4.2.1 1
lineage2.2.1.1 4
lineage4.3.3 12
lineage2.1;lineage4.9 1
lineage4.4.2 2
lineage2.2.1;lineage4.5 1
lineage1.1.3.1 2
lineage4.2.1 14
lineage3.1.2.1;lineage4.9 1
lineage1.2.2.2 2
lineage4.3.2 4
lineage4.1.1.3 9
lineage3.1.1;lineage4.9 1
lineage6.1.3 1
La1.7;M.canetti;lineage4.9 1
lineage4.3.4.1 4
lineage4.6.2.2 1
lineage4.3.3;lineage4.9 1
lineage4.8;lineage4.9 2
lineage4.4.1.1 11
lineage4.1.1.3.1;lineage4.9 1
lineage3.1.1 5
La1.7.X-unk4 1
lineage4.1.2 2
lineage4.3.2.1 1
lineage4.9.1 1
lineage4.1.2.1 17
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.1;lineage4.9 1
lineage4.4.1.1.1 2
1
lineage2.2.1;lineage4.8 2
lineage4.2.2.2 6
lineage2.2.1;lineage4 1
lineage3.1.2.2 1
lineage4.3.4.2 5
lineage4 3
lineage4.6.1.1 1
lineage2.2;lineage4 1
lineage4.2.1.1 1
lineage6.1.2 1
lineage3.1 1
lineage4.2.2 1
La1.7;lineage4.9 1
lineage4.3.4.1;lineage4.9 1
lineage4.5 1
lineage5.1.1 1
lineage4.4.1.2 4
lineage4.3.4.2;lineage4.9 1
lineage3.1.2.1 1
lineage3.1;lineage4.6.1.1 1
lineage3.1.1;lineage4 1
lineage3.1.3 1
lineage4.8.2 1
lineage4.1.2.1;lineage4.9 1
lineage4.6.5 3
lineage3;lineage4.2.2.2 1
lineage2.2.1;lineage4.9 1
lineage4.4 1
lineage3.1.2;lineage4.1.1.3.1 1
M.canetti;lineage2.1;lineage4.9 1
lineage2.2.1;lineage2.2.2 1
lineage1.2.1.1 1
lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 399
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR19303817 Other lineage2.2.1 None
SRR6152899 MDR-TB lineage2.2.2 ca
ERR3275941 RR-TB lineage4.3 nl
SRR10303325 MDR-TB lineage2.2.1 None
SRR6045909 Other lineage4.8.1 None
SRR10430377 MDR-TB lineage2.2.1 None
ERR10796634 Other lineage4.7 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR7070251 Sensitive lineage4.1.1.3.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769508 RR-TB lineage4.9 None
SRR11342671 RR-TB lineage4.1.3 None
SRR7236134 Other La1.8.1 None
SRR7645927 Other lineage4.8 None
SRR5163959 Other lineage4.9 None
ERR978735 Other lineage4.8 None
ERR10796571 Other lineage4.9 None
SRR18002984 MDR-TB lineage2.2.2 None
ERR1815538 Other La1.7.1 None
SRR5818647 Other lineage4.3.4.2.1 None
SRR11342686 MDR-TB lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR978748 Other lineage4.8 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR18002963 Other lineage2.2.1 None
SRR7755652 Pre-XDR-TB lineage2.2.1;lineage4.2.1 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR7131233 MDR-TB lineage4.3.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR978727 Other lineage4.8 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003009 MDR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR18002887 MDR-TB lineage2.2.1.1 None
ERR3283032 Other lineage4.9 None
ERR911930 Other lineage4.8 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
SRR7070515 Other lineage1.1.3.1 None
SRR18002997 Other lineage2.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR6046484 Other lineage1.2.2.2 None
ERR4972567 MDR-TB lineage4.3.2 None
ERR867555 Other lineage3 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR7645899 Other lineage2.2.1 None
SRR6046087 Sensitive lineage4.9 None
SRR6046020 Other lineage3 None
SRR19303917 Sensitive lineage2.2.1 None
SRR6046210 Other lineage4.9 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR6045496 Other lineage6.1.3 None
ERR867541 MDR-TB lineage4.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR10796617 Other lineage4.3.4.1 None
ERR5979407 Other lineage3 None
SRR11342643 MDR-TB lineage4.1.1.1 None
SRR7131004 Other lineage4.6.2.2 None
ERR2229541 Other lineage4.8 None
ERR10796615 Other lineage4.3.3;lineage4.9 None
ERR2228890 Other lineage4.8;lineage4.9 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR18002967 HR-TB lineage2.2.1 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
ERR10796577 Other lineage4.9 None
SRR6397443 Sensitive lineage3.1.1 ca
ERR2228910 Other lineage4.8 None
ERR2229204 Other lineage4.8 None
SRR1173421 Other lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
ERR2228900 Other lineage4.8 None
ERR3445487 Other La1.7.X-unk4 None
ERR978752 Other lineage4.8 None
ERR2229760 Sensitive lineage4.8 dk
ERR10796589 Other lineage4.9 None
SRR18003024 RR-TB lineage2.2.1 None
SRR19303820 RR-TB lineage4.8 None
ERR2229148 Other lineage4.8 dk
SRR18003023 Other lineage2.2.1 None
ERR2229540 Sensitive lineage4.8 None
ERR10796553 Other lineage4.9 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
ERR270777 HR-TB lineage4.1.2 None
SRR18002980 Other lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR978746 RR-TB lineage4.8 None
ERR3957925 Sensitive lineage4.3.2 None
ERR978750 RR-TB lineage4.8 None
SRR11349147 RR-TB lineage4.3.2.1 None
ERR502470 RR-TB lineage4.9 None
SRR1173310 Other lineage3.1.1 None
SRR18003045 Other lineage2.2.1 None
SRR9971122 MDR-TB lineage4.8 None
ERR037504 Other lineage4.9.1 None
SRR18002906 Pre-XDR-TB lineage2.2.1 None
SRR6397975 Sensitive lineage4.1.2.1 ca
ERR2229147 Other lineage4.8 None
SRR19304115 Other lineage4.1.2.1 None
SAMEA3501070 RR-TB lineage4.8 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2228813 Other lineage4.8 None
SRR6045384 Other lineage4.1.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
ERR10796629 Other lineage4.1;lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SAMEA3501052 RR-TB lineage4.8 None
ERR017781 Other lineage3 None
SRR6046442 Other lineage3 None
SRR18002901 MDR-TB lineage2.2.1 None
SRR7070157 Other lineage4.1.1.3.1 None
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR18572455 Sensitive lineage4.9 None
ERR4817069 RR-TB None
SRR3675496 Other lineage4.1.1.3 gb
SRR6044952 Other lineage4.9 None
ERR978733 RR-TB lineage4.8 None
SRR18002964 Other lineage2.2.1 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
ERR2600561 Other lineage2.2.1;lineage4.8 None
ERR10796635 Other lineage4.8 None
SRR18003015 MDR-TB lineage2.2.1 None
ERR2513382 RR-TB lineage4.1.1.3 None
SRR7069931 Other lineage4.2.2.2 None
ERR867568 Other lineage2.2.1;lineage4 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR6046440 Other lineage3.1.2.2 None
SRR9971372 MDR-TB lineage4.1.1.1 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR7131236 Other lineage4.3.4.2 None
SRR3675265 Other lineage4 None
SRR18002974 Other lineage2.2.1 None
SRR3675565 Other lineage4 None
SRR2101471 Sensitive lineage4.4.1.1 None
SRR7131147 Other lineage4.1.2.1 None
SRR18002933 Other lineage2.2.1 None
ERR978747 Other lineage4.8 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR2229811 Other lineage4.8 dk
ERR1198990 Other lineage4.6.1.1 ug
ERR978726 RR-TB lineage4.8 None
SRR11342687 RR-TB lineage4.2.2.2 None
SAMEA3501015 Other lineage4.8 None
SRR19303784 Other lineage4.2.1 None
SRR7131161 Other lineage4.8 None
SRR21727760 Other lineage2.2.1 None
SRR1238559 Other lineage4.9 None
ERR2027257 Other lineage4.1.2.1 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR7131196 Other lineage4.8 None
SRR7645973 Other lineage4.3.4.1 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR6045603 Other lineage4.1.1.3 None
SRR7070521 Other lineage4.2.1.1 None
ERR2228838 Other lineage4.8 None
SRR6046343 Other lineage2.2.1 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR18002937 Other lineage2.2.1 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR19304094 Other lineage6.1.2 None
SRR6045778 Other lineage3.1 None
SRR19303949 Other lineage4.3.3 None
ERR10796640 Other lineage4.1.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
ERR10796568 Other lineage4.9 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR19304104 Other lineage4.8 None
SRR023450 RR-TB lineage2.2.1 None
SRR6044983 Other lineage3.1.1 None
SRR3675267 Other La1.7;lineage4.9 None
SRR18002874 MDR-TB lineage2.2.1 None
ERR5979454 Pre-XDR-TB lineage3 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
SRR7131061 Other lineage2.2.1 None
SRR7131237 Other lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR11342653 MDR-TB lineage2.2.1 None
SRR3675527 Other lineage4.9 None
SRR18003007 MDR-TB lineage4.5 None
SRR7645906 Other lineage2.2.1 None
SRR6046521 Other lineage4.4.1.1 None
SRR7131032 Other lineage2.2.1 None
SRR5007204 Other lineage4.1.2.1 None
ERR502517 Other lineage5.1.1 None
ERR978693 Other lineage4.8 None
SRR7131182 Other lineage4.1.2.1 None
ERR5865106 MDR-TB lineage4.2.1 None
SRR12062542 Pre-XDR-TB lineage2.2.1 None
SRR7646018 MDR-TB lineage4.2.1 None
ERR3014599 Pre-XDR-TB lineage4.1.2.1 tn
ERR9117805 Other lineage4.3.2 None
SRR11342646 HR-TB lineage3 None
SRR6397815 Other lineage4.4.1.1 None
SRR6045516 Other lineage3.1.1 None
SRR023487 RR-TB lineage2.2.1 None
SRR1172065 Pre-XDR-TB lineage3 None
SRR19303960 Sensitive lineage4.4.1.2 None
SRR11342648 MDR-TB lineage4.1.1.3 None
SRR11342640 MDR-TB lineage4.3.3 None
ERR867540 MDR-TB lineage2.2.1 None
ERR867567 RR-TB lineage3 None
SRR6045986 Other lineage3 None
SRR3675509 Other lineage4.9 None
ERR10796631 Other lineage4.3.4.2;lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
SRR3675513 Other lineage4.8 None
SRR6044838 Other lineage4.9 None
SRR10614047 Sensitive lineage4.9 None
SRR19303818 Other lineage4.3.4.2 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR7070154 Other lineage4.4.1.1 None
SRR7069097 Other lineage3.1.2.1 None
ERR978734 RR-TB lineage4.8 None
SRR7131195 Other lineage2.2.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR1173565 MDR-TB lineage3.1;lineage4.6.1.1 None
ERR10796593 Other lineage4.3 None
SRR7069760 Other lineage3 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
DRR034348 Other lineage2.2.1 None
SRR7645895 Other lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR6046275 Other lineage3.1.1;lineage4 None
ERR978761 Other lineage4.8 None
SRR1173833 Other lineage4.9 None
ERR10796588 Other lineage4.3.3 None
ERR4972588 MDR-TB lineage4.3.2 None
ERR867569 Other lineage4.9 None
SRR18002987 Other lineage2.2.1 None
SRR6044993 Other lineage3 None
ERR10796632 Other lineage4.3.3 None
SRR11349207 RR-TB lineage2.2.1 None
SAMEA3501065 RR-TB lineage4.8 None
SRR6397733 Other lineage4.4.1.2 None
SRR10869285 Pre-XDR-TB lineage2.2.2 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR6045178 Other lineage3 None
SRR7131068 Other lineage4.8 None
SRR7069922 Other lineage2.2.1 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
SRR6045613 Other lineage3.1.3 None
ERR978694 Other lineage4.8 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR7068941 Other lineage4.8.2 None
SRR22048550 Other lineage1.1.3.1 None
ERR2600562 MDR-TB lineage2.2.1;lineage4.8 None
SRR16156697 RR-TB lineage2.2.1 None
ERR3468613 Other La1.8.1 None
SRR6045553 Other lineage4.1.2.1;lineage4.9 None
ERR2229436 Other lineage4.8 None
ERR10796628 Other lineage4.3.3 None
ERR2229733 Other lineage4.8 dk
SRR7755655 Other lineage4.1.2.1 None
ERR10796599 Other lineage4.8 None
ERR7801175 HR-TB lineage4.6.5 None
ERR7801176 RR-TB lineage4.6.5 None
ERR10796581 Other lineage4.1.2 None
SRR7755642 MDR-TB lineage4.2.1 None
ERR10219876 Other lineage4.3.4.2 None
ERR983238 MDR-TB lineage2.2.1.1 None
SRR6046497 Sensitive lineage4.9 None
ERR978757 RR-TB lineage4.8 None
SRR7070446 Other lineage3 None
SRR13180335 Other lineage4.3.4.2 None
SRR7069314 Other lineage3 None
SRR5818694 Other lineage3;lineage4.2.2.2 None
SRR16058249 Sensitive lineage4.2.2.2 None
ERR10796620 Other lineage4.1.1.1 None
SRR14782539 MDR-TB lineage4.2.1 None
ERR171143 Sensitive lineage4.9 za
SRR7755645 Pre-XDR-TB lineage2.2.1 None
ERR3439265 Sensitive lineage4.9 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR12062551 Pre-XDR-TB lineage2.2.1 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
SRR19303796 Other lineage4.3.3 None
ERR978762 Other lineage4.8 None
SRR18002976 Other lineage2.2.1 None
SRR11342691 MDR-TB lineage2.2.1 None
SRR18913779 Other lineage3 None
SRR7070535 HR-TB lineage4.1.2.1 None
SRR16627752 RR-TB lineage4.4 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR6152980 HR-TB lineage4.8 ca
SRR18002956 Other lineage2.2.1 None
ERR10796555 Other lineage4.1.2.1 None
SRR6982141 Other lineage4.3.3 None
ERR2514430 Other lineage3.1.2;lineage4.1.1.3.1 None
ERR10796592 Other lineage4.9 None
SRR7069835 Other lineage2.2.1 None
ERR10796591 Other lineage4.9 None
SRR11342684 HR-TB lineage4.4.1.1 None
SRR7645928 Other lineage4.7 None
SRR3675582 Other lineage4.9 None
SRR11342688 Other lineage4.2.2.2 None
ERR2027255 HR-TB lineage4.4.1.1 None
SRR6044841 Other lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR11349175 Other lineage2.2.1 None
ERR867572 Other lineage4.9 None
SAMEA3450033 Other lineage4.8 None
SRR6044873 Other lineage4.1.1.3.1 None
ERR867570 RR-TB lineage4.9 None
SRR6257067 HR-TB lineage4.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
ERR5311077 Other La1.8.1 None
ERR978751 Other lineage4.8 None
SRR6045379 Sensitive lineage4.9 None
SAMEA3501063 RR-TB lineage4.8 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR7131121 Other lineage4.3.3 None
SRR7131053 Other lineage2.2.1 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2229366 Other lineage4.8 None
ERR10796560 Other lineage4.9 None
SRR19303907 Other lineage4.8 None
SRR11349203 MDR-TB lineage4.4.1.1 None
SRR6046848 Other lineage4.6.5 None
SRR7069946 Other lineage4.8 None
ERR2600422 MDR-TB lineage2.2.1 None
ERR3468488 Other La1.8.1 None
SRR1173719 Other lineage4.9 None
ERR2228899 Other lineage4.8 None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR11342638 MDR-TB lineage4.4.1.1.1 None
ERR2512423 Other lineage4.1.1.3 None
ERR867538 Other lineage4.2.2.2 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR10796597 Other lineage4.3.3 None
SRR6045295 Other lineage4.7 None
SRR7131145 Other lineage4.1.2.1 None
SRR5007182 MDR-TB lineage3 None
SRR7069377 Other lineage3 None
SRR11349201 MDR-TB lineage4.1.1.3 None
ERR911929 Other lineage4.8 None
SRR3675389 Other lineage4.9 None
SRR6045928 Other lineage4.9 None
ERR10796580 Other lineage4 None
SRR7131216 Other lineage4.1.2.1 None
ERR867571 Other lineage4.9 None
ERR978726_ERR978727 RR-TB lineage4.8 None
SRR18002876 MDR-TB lineage2.2.1;lineage2.2.2 None
SRR7645924 Pre-XDR-TB lineage4.2.1 None
SRR6045621 Other lineage4.1.1.3 None
ERR3283006 RR-TB lineage4.9 None
ERR10796566 Other lineage4.9 None
ERR978754 RR-TB lineage4.8 None
ERR978760 RR-TB lineage4.8 None
SRR19303899 Other lineage3 None
ERR176605 HR-TB lineage4.3.4.2.1 mw
SRR8600288 Other La1.8.1 None
SAMEA3501046 RR-TB lineage4.8 None
SRR7070144 Other lineage4.8 None
SRR22048536 Other lineage4.3.3 None
ERR10762275 MDR-TB lineage4.2.1 None
ERR978755 RR-TB lineage4.8 None
ERR10796562 Other lineage4.3.4.1 None
SRR7755657 Other lineage4.8 None
ERR911929_ERR911930 Other lineage4.8 None
ERR4769530 RR-TB lineage4.9 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR7070320 Other lineage4.8 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR7069347 Other lineage4.1.2.1 None
SRR7070134 Other lineage3.1.1 None
SRR7645971 Other lineage2.2.1 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
ERR978756 Other lineage4.8 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
SRR7645977 MDR-TB lineage4.2.1 None
SRR6397579 Other lineage4.4.1.2 ca
ERR978694_ERR978693 Other lineage4.8 None
SRR7131123 Other lineage4.8 None
ERR019855 Other lineage3 None
ERR4769554 RR-TB lineage4.9 None
SRR11342669 Other lineage4.8 None
SRR7645974 Other lineage4.3.4.1 None
ERR2228810 Other lineage4.8;lineage4.9 None
SRR6045843 Other lineage4.2.2.2 None
SRR7131229 Other lineage4.1.2.1 None
ERR10796626 Other lineage4.1.2.1 None
SRR6044769 Sensitive lineage1.1.2 None
SRR1002691 HR-TB lineage4.2.1 None
SRR18003038 Other lineage2.2.1 None
SRR22048474 RR-TB lineage4.8 None